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Gene Expression Data
Assay Details
Assay
Reference: J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
Assay type: RNA in situ
MGI Accession ID: MGI:4827441
Gene symbol: Prox1
Gene name: prospero homeobox 1
Probe: MGC clone 58947
Probe preparation: Antisense labelled with digoxigenin RNA
Visualized with: Alkaline phosphatase
Assay notes: Cryosections of fresh frozen material were fixed in 4% paraformaldehyde for 20 min. before further processing. A tyramide-biotin/streptavidin amplification step was included in the in situ hybridization procedure.
Results
Specimen euxassay_004159_01: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: liver Moderate Regionally restricted euxassay_004159_01
TS23: cardiovascular system Strong Regionally restricted euxassay_004159_01
TS23: lens Strong Regionally restricted euxassay_004159_01
TS23: embryo mesenchyme Strong Regionally restricted euxassay_004159_01
Specimen euxassay_004159_02: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: liver Moderate Regionally restricted euxassay_004159_02
TS23: cardiovascular system Strong Regionally restricted euxassay_004159_02
TS23: lens Strong Regionally restricted euxassay_004159_02
TS23: embryo mesenchyme Strong Regionally restricted euxassay_004159_02
Specimen euxassay_004159_03: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon ventricular layer Strong Regionally restricted euxassay_004159_03
TS23: telencephalon mantle layer Strong Regionally restricted euxassay_004159_03
TS23: liver Moderate Regionally restricted euxassay_004159_03
TS23: cardiovascular system Strong Regionally restricted euxassay_004159_03
TS23: embryo mesenchyme Strong Regionally restricted euxassay_004159_03
Specimen euxassay_004159_04: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon ventricular layer Strong Regionally restricted euxassay_004159_04
TS23: telencephalon mantle layer Strong Regionally restricted euxassay_004159_04
TS23: rest of cerebellum mantle layer Strong Regionally restricted euxassay_004159_04
TS23: liver Moderate Regionally restricted euxassay_004159_04
TS23: cardiovascular system Strong Regionally restricted euxassay_004159_04
TS23: embryo mesenchyme Strong Regionally restricted euxassay_004159_04
Specimen euxassay_004159_05: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon ventricular layer Strong Regionally restricted euxassay_004159_05
TS23: telencephalon mantle layer Strong Regionally restricted euxassay_004159_05
TS23: rest of cerebellum mantle layer Strong Regionally restricted euxassay_004159_05
TS23: liver Moderate Regionally restricted euxassay_004159_05
TS23: heart ventricle Moderate Regionally restricted euxassay_004159_05
TS23: cardiovascular system Strong Regionally restricted euxassay_004159_05
TS23: embryo mesenchyme Strong Regionally restricted euxassay_004159_05
Specimen euxassay_004159_06: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon ventricular layer Strong Regionally restricted euxassay_004159_06
TS23: telencephalon mantle layer Strong Regionally restricted euxassay_004159_06
TS23: midbrain ventricular layer Strong Regionally restricted euxassay_004159_06
TS23: rest of cerebellum mantle layer Moderate Regionally restricted euxassay_004159_06
TS23: rest of cerebellum ventricular layer Moderate Regionally restricted euxassay_004159_06
TS23: pons ventricular layer Moderate Regionally restricted euxassay_004159_06
TS23: medulla oblongata alar plate ventricular layer Moderate Regionally restricted euxassay_004159_06
TS23: rest of cerebellum marginal layer Moderate Regionally restricted euxassay_004159_06
TS23: pons marginal layer Moderate Regionally restricted euxassay_004159_06
TS23: medulla oblongata basal plate ventricular layer Moderate Regionally restricted euxassay_004159_06
TS23: medulla oblongata basal plate mantle layer Moderate Regionally restricted euxassay_004159_06
TS23: medulla oblongata alar plate mantle layer Moderate Regionally restricted euxassay_004159_06
TS23: liver Moderate Regionally restricted euxassay_004159_06
TS23: heart ventricle Moderate Regionally restricted euxassay_004159_06
TS23: cardiovascular system Strong Regionally restricted euxassay_004159_06
TS23: embryo mesenchyme Strong Regionally restricted euxassay_004159_06
Specimen euxassay_004159_07: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon ventricular layer Strong Regionally restricted euxassay_004159_07
TS23: telencephalon mantle layer Strong Regionally restricted euxassay_004159_07
TS23: midbrain ventricular layer Strong Regionally restricted euxassay_004159_07
TS23: medulla oblongata alar plate mantle layer Moderate Regionally restricted euxassay_004159_07
TS23: medulla oblongata alar plate ventricular layer Moderate Regionally restricted euxassay_004159_07
TS23: medulla oblongata basal plate mantle layer Moderate Regionally restricted euxassay_004159_07
TS23: medulla oblongata basal plate ventricular layer Moderate Regionally restricted euxassay_004159_07
TS23: pons ventricular layer Moderate Regionally restricted euxassay_004159_07
TS23: liver Moderate Regionally restricted euxassay_004159_07
TS23: heart ventricle Moderate Regionally restricted euxassay_004159_07
TS23: cardiovascular system Strong Regionally restricted euxassay_004159_07
TS23: embryo mesenchyme Strong Regionally restricted euxassay_004159_07
Specimen euxassay_004159_08: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon ventricular layer Strong Regionally restricted euxassay_004159_08
TS23: telencephalon mantle layer Strong Regionally restricted euxassay_004159_08
TS23: diencephalon lateral wall mantle layer Strong Regionally restricted euxassay_004159_08
TS23: midbrain ventricular layer Strong Regionally restricted euxassay_004159_08
TS23: midbrain mantle layer Strong Regionally restricted euxassay_004159_08
TS23: medulla oblongata alar plate mantle layer Moderate Regionally restricted euxassay_004159_08
TS23: medulla oblongata basal plate mantle layer Moderate Regionally restricted euxassay_004159_08
TS23: medulla oblongata alar plate ventricular layer Moderate Regionally restricted euxassay_004159_08
TS23: medulla oblongata basal plate ventricular layer Moderate Regionally restricted euxassay_004159_08
TS23: pons ventricular layer Moderate Regionally restricted euxassay_004159_08
TS23: pons mantle layer Moderate Regionally restricted euxassay_004159_08
TS23: spinal cord mantle layer Moderate Regionally restricted euxassay_004159_08
TS23: liver Moderate Regionally restricted euxassay_004159_08
TS23: heart ventricle Moderate Regionally restricted euxassay_004159_08
TS23: pancreas Strong Regionally restricted euxassay_004159_08
TS23: cardiovascular system Strong Regionally restricted euxassay_004159_08
TS23: embryo mesenchyme Strong Regionally restricted euxassay_004159_08
Specimen euxassay_004159_09: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon ventricular layer Strong Regionally restricted euxassay_004159_09
TS23: telencephalon mantle layer Strong Regionally restricted euxassay_004159_09
TS23: diencephalon lateral wall mantle layer Strong Regionally restricted euxassay_004159_09
TS23: midbrain ventricular layer Strong Regionally restricted euxassay_004159_09
TS23: midbrain mantle layer Strong Regionally restricted euxassay_004159_09
TS23: pons ventricular layer Moderate Regionally restricted euxassay_004159_09
TS23: pons mantle layer Moderate Regionally restricted euxassay_004159_09
TS23: medulla oblongata basal plate ventricular layer Moderate Regionally restricted euxassay_004159_09
TS23: medulla oblongata basal plate mantle layer Moderate Regionally restricted euxassay_004159_09
TS23: medulla oblongata alar plate ventricular layer Moderate Regionally restricted euxassay_004159_09
TS23: medulla oblongata alar plate mantle layer Moderate Regionally restricted euxassay_004159_09
TS23: spinal cord mantle layer Moderate Regionally restricted euxassay_004159_09
TS23: liver Moderate Regionally restricted euxassay_004159_09
TS23: heart ventricle Moderate Regionally restricted euxassay_004159_09
TS23: pancreas Strong Regionally restricted euxassay_004159_09
TS23: cardiovascular system Strong Regionally restricted euxassay_004159_09
TS23: embryo mesenchyme Strong Regionally restricted euxassay_004159_09
Specimen euxassay_004159_10: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon ventricular layer Strong Regionally restricted euxassay_004159_10
TS23: diencephalon lateral wall ventricular layer Strong Regionally restricted euxassay_004159_10
TS23: diencephalon lateral wall mantle layer Strong Regionally restricted euxassay_004159_10
TS23: telencephalon mantle layer Strong Regionally restricted euxassay_004159_10
TS23: midbrain ventricular layer Strong Regionally restricted euxassay_004159_10
TS23: midbrain mantle layer Strong Regionally restricted euxassay_004159_10
TS23: medulla oblongata alar plate mantle layer Moderate Regionally restricted euxassay_004159_10
TS23: medulla oblongata alar plate ventricular layer Moderate Regionally restricted euxassay_004159_10
TS23: medulla oblongata basal plate mantle layer Moderate Regionally restricted euxassay_004159_10
TS23: medulla oblongata basal plate ventricular layer Moderate Regionally restricted euxassay_004159_10
TS23: pons ventricular layer Moderate Regionally restricted euxassay_004159_10
TS23: pons mantle layer Moderate Regionally restricted euxassay_004159_10
TS23: spinal cord mantle layer Moderate Regionally restricted euxassay_004159_10
TS23: liver Moderate Regionally restricted euxassay_004159_10
TS23: heart ventricle Moderate Regionally restricted euxassay_004159_10
TS23: pancreas Strong Regionally restricted euxassay_004159_10
TS23: cardiovascular system Strong Regionally restricted euxassay_004159_10
TS23: embryo mesenchyme Strong Regionally restricted euxassay_004159_10
Specimen euxassay_004159_11: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon ventricular layer Strong Regionally restricted euxassay_004159_11
TS23: diencephalon lateral wall ventricular layer Strong Regionally restricted euxassay_004159_11
TS23: diencephalon lateral wall mantle layer Strong Regionally restricted euxassay_004159_11
TS23: telencephalon mantle layer Strong Regionally restricted euxassay_004159_11
TS23: midbrain ventricular layer Strong Regionally restricted euxassay_004159_11
TS23: pons ventricular layer Moderate Regionally restricted euxassay_004159_11
TS23: pons mantle layer Moderate Regionally restricted euxassay_004159_11
TS23: rest of cerebellum ventricular layer Moderate Regionally restricted euxassay_004159_11
TS23: medulla oblongata basal plate ventricular layer Moderate Regionally restricted euxassay_004159_11
TS23: medulla oblongata basal plate mantle layer Moderate Regionally restricted euxassay_004159_11
TS23: medulla oblongata alar plate ventricular layer Moderate Regionally restricted euxassay_004159_11
TS23: medulla oblongata alar plate mantle layer Moderate Regionally restricted euxassay_004159_11
TS23: spinal cord mantle layer Moderate Regionally restricted euxassay_004159_11
TS23: liver Moderate Regionally restricted euxassay_004159_11
TS23: heart ventricle Moderate Regionally restricted euxassay_004159_11
TS23: cardiovascular system Strong Regionally restricted euxassay_004159_11
TS23: embryo mesenchyme Strong Regionally restricted euxassay_004159_11
Specimen euxassay_004159_12: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon ventricular layer Strong Regionally restricted euxassay_004159_12
TS23: diencephalon lateral wall ventricular layer Strong Regionally restricted euxassay_004159_12
TS23: diencephalon lateral wall mantle layer Strong Regionally restricted euxassay_004159_12
TS23: telencephalon mantle layer Strong Regionally restricted euxassay_004159_12
TS23: midbrain mantle layer Strong Regionally restricted euxassay_004159_12
TS23: midbrain ventricular layer Strong Regionally restricted euxassay_004159_12
TS23: medulla oblongata alar plate mantle layer Moderate Regionally restricted euxassay_004159_12
TS23: medulla oblongata alar plate ventricular layer Moderate Regionally restricted euxassay_004159_12
TS23: medulla oblongata basal plate mantle layer Moderate Regionally restricted euxassay_004159_12
TS23: medulla oblongata basal plate ventricular layer Moderate Regionally restricted euxassay_004159_12
TS23: pons mantle layer Moderate Regionally restricted euxassay_004159_12
TS23: rest of cerebellum ventricular layer Moderate Regionally restricted euxassay_004159_12
TS23: pons ventricular layer Moderate Regionally restricted euxassay_004159_12
TS23: spinal cord mantle layer Moderate Regionally restricted euxassay_004159_12
TS23: liver Moderate Regionally restricted euxassay_004159_12
TS23: heart ventricle Moderate Regionally restricted euxassay_004159_12
TS23: cardiovascular system Strong Regionally restricted euxassay_004159_12
TS23: embryo mesenchyme Strong Regionally restricted euxassay_004159_12
Specimen euxassay_004159_13: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: diencephalon lateral wall mantle layer Strong Regionally restricted euxassay_004159_13
TS23: diencephalon lateral wall ventricular layer Strong Regionally restricted euxassay_004159_13
TS23: telencephalon mantle layer Strong Regionally restricted euxassay_004159_13
TS23: telencephalon ventricular layer Strong Regionally restricted euxassay_004159_13
TS23: midbrain mantle layer Strong Regionally restricted euxassay_004159_13
TS23: midbrain ventricular layer Strong Regionally restricted euxassay_004159_13
TS23: pons ventricular layer Moderate Regionally restricted euxassay_004159_13
TS23: pons mantle layer Moderate Regionally restricted euxassay_004159_13
TS23: medulla oblongata basal plate ventricular layer Moderate Regionally restricted euxassay_004159_13
TS23: medulla oblongata basal plate mantle layer Moderate Regionally restricted euxassay_004159_13
TS23: medulla oblongata alar plate ventricular layer Moderate Regionally restricted euxassay_004159_13
TS23: medulla oblongata alar plate mantle layer Moderate Regionally restricted euxassay_004159_13
TS23: spinal cord mantle layer Moderate Regionally restricted euxassay_004159_13
TS23: liver Moderate Regionally restricted euxassay_004159_13
TS23: heart ventricle Moderate Regionally restricted euxassay_004159_13
TS23: pancreas Strong Regionally restricted euxassay_004159_13
TS23: cardiovascular system Strong Regionally restricted euxassay_004159_13
TS23: embryo mesenchyme Strong Regionally restricted euxassay_004159_13
Specimen euxassay_004159_14: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: diencephalon lateral wall mantle layer Strong Regionally restricted euxassay_004159_14
TS23: telencephalon ventricular layer Strong Regionally restricted euxassay_004159_14
TS23: telencephalon mantle layer Strong Regionally restricted euxassay_004159_14
TS23: midbrain mantle layer Strong Regionally restricted euxassay_004159_14
TS23: midbrain ventricular layer Strong Regionally restricted euxassay_004159_14
TS23: pons ventricular layer Moderate Regionally restricted euxassay_004159_14
TS23: pons mantle layer Moderate Regionally restricted euxassay_004159_14
TS23: medulla oblongata basal plate ventricular layer Moderate Regionally restricted euxassay_004159_14
TS23: medulla oblongata basal plate mantle layer Moderate Regionally restricted euxassay_004159_14
TS23: medulla oblongata alar plate ventricular layer Moderate Regionally restricted euxassay_004159_14
TS23: medulla oblongata alar plate mantle layer Moderate Regionally restricted euxassay_004159_14
TS23: liver Moderate Regionally restricted euxassay_004159_14
TS23: heart ventricle Moderate Regionally restricted euxassay_004159_14
TS23: pancreas Strong Regionally restricted euxassay_004159_14
TS23: cardiovascular system Strong Regionally restricted euxassay_004159_14
TS23: embryo mesenchyme Strong Regionally restricted euxassay_004159_14
Specimen euxassay_004159_15: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: diencephalon lateral wall mantle layer Strong Regionally restricted euxassay_004159_15
TS23: telencephalon mantle layer Strong Regionally restricted euxassay_004159_15
TS23: telencephalon ventricular layer Strong Regionally restricted euxassay_004159_15
TS23: medulla oblongata alar plate ventricular layer Moderate Regionally restricted euxassay_004159_15
TS23: medulla oblongata alar plate mantle layer Moderate Regionally restricted euxassay_004159_15
TS23: pons ventricular layer Moderate Regionally restricted euxassay_004159_15
TS23: pons mantle layer Moderate Regionally restricted euxassay_004159_15
TS23: liver Moderate Regionally restricted euxassay_004159_15
TS23: heart ventricle Moderate Regionally restricted euxassay_004159_15
TS23: pancreas Strong Regionally restricted euxassay_004159_15
TS23: cardiovascular system Strong Regionally restricted euxassay_004159_15
TS23: embryo mesenchyme Strong Regionally restricted euxassay_004159_15
Specimen euxassay_004159_16: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: diencephalon lateral wall mantle layer Strong Regionally restricted euxassay_004159_16
TS23: telencephalon mantle layer Strong Regionally restricted euxassay_004159_16
TS23: telencephalon ventricular layer Strong Regionally restricted euxassay_004159_16
TS23: rest of cerebellum mantle layer Moderate Regionally restricted euxassay_004159_16
TS23: pons mantle layer Moderate Regionally restricted euxassay_004159_16
TS23: pons ventricular layer Moderate Regionally restricted euxassay_004159_16
TS23: liver Moderate Regionally restricted euxassay_004159_16
TS23: cardiovascular system Strong Regionally restricted euxassay_004159_16
TS23: embryo mesenchyme Strong Regionally restricted euxassay_004159_16
Specimen euxassay_004159_17: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon ventricular layer Strong Regionally restricted euxassay_004159_17
TS23: telencephalon mantle layer Strong Regionally restricted euxassay_004159_17
TS23: rest of cerebellum mantle layer Moderate Regionally restricted euxassay_004159_17
TS23: pons mantle layer Moderate Regionally restricted euxassay_004159_17
TS23: pons ventricular layer Moderate Regionally restricted euxassay_004159_17
TS23: liver Moderate Regionally restricted euxassay_004159_17
TS23: cardiovascular system Strong Regionally restricted euxassay_004159_17
TS23: embryo mesenchyme Strong Regionally restricted euxassay_004159_17
Specimen euxassay_004159_18: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon ventricular layer Strong Regionally restricted euxassay_004159_18
TS23: telencephalon mantle layer Strong Regionally restricted euxassay_004159_18
TS23: liver Moderate Regionally restricted euxassay_004159_18
TS23: cardiovascular system Strong Regionally restricted euxassay_004159_18
TS23: embryo mesenchyme Strong Regionally restricted euxassay_004159_18
Specimen euxassay_004159_19: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon ventricular layer Strong Regionally restricted euxassay_004159_19
TS23: telencephalon mantle layer Strong Regionally restricted euxassay_004159_19
TS23: liver Moderate Regionally restricted euxassay_004159_19
TS23: cardiovascular system Strong Regionally restricted euxassay_004159_19
TS23: embryo mesenchyme Strong Regionally restricted euxassay_004159_19
Specimen euxassay_004159_20: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon ventricular layer Strong Regionally restricted euxassay_004159_20
TS23: telencephalon mantle layer Strong Regionally restricted euxassay_004159_20
TS23: cardiovascular system Strong Regionally restricted euxassay_004159_20
TS23: embryo mesenchyme Strong Regionally restricted euxassay_004159_20
Specimen euxassay_004159_21: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: cardiovascular system Strong Regionally restricted euxassay_004159_21
TS23: embryo mesenchyme Strong Regionally restricted euxassay_004159_21
Specimen euxassay_004159_22: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: lens Strong Regionally restricted euxassay_004159_22
TS23: embryo mesenchyme Strong Regionally restricted euxassay_004159_22
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
05/14/2024
MGI 6.23 		The Jackson Laboratory