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Gene Expression Data
Assay Details
Assay
Reference: J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
Assay type: RNA in situ
MGI Accession ID: MGI:4827341
Gene symbol: Pou4f1
Gene name: POU domain, class 4, transcription factor 1
Probe: T38789
Probe preparation: Antisense labelled with digoxigenin RNA
Visualized with: Alkaline phosphatase
Assay notes: Cryosections of fresh frozen material were fixed in 4% paraformaldehyde for 20 min. before further processing. A tyramide-biotin/streptavidin amplification step was included in the in situ hybridization procedure.
Results
Specimen euxassay_013839_01: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: neural retina Moderate Regionally restricted euxassay_013839_01
Specimen euxassay_013839_02: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: neural retina Strong Regionally restricted euxassay_013839_02
Specimen euxassay_013839_03: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: neural retina Strong Regionally restricted euxassay_013839_03
TS23: trigeminal ganglion Strong Regionally restricted euxassay_013839_03
Specimen euxassay_013839_04: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Strong Regionally restricted euxassay_013839_04
TS23: facial ganglion Strong Regionally restricted euxassay_013839_04
Specimen euxassay_013839_05: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Strong Regionally restricted euxassay_013839_05
TS23: facial ganglion Strong Regionally restricted euxassay_013839_05
TS23: midbrain mantle layer Strong Regionally restricted euxassay_013839_05
Specimen euxassay_013839_06: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Strong Regionally restricted euxassay_013839_06
TS23: vestibulo-cochlear ganglion Strong Regionally restricted euxassay_013839_06
TS23: midbrain mantle layer Strong Regionally restricted euxassay_013839_06
Specimen euxassay_013839_07: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: vestibulo-cochlear ganglion Strong Regionally restricted euxassay_013839_07
TS23: glossopharyngeal ganglion Strong Regionally restricted euxassay_013839_07
TS23: trigeminal ganglion Strong Regionally restricted euxassay_013839_07
TS23: dorsal root ganglion Strong Regionally restricted euxassay_013839_07
TS23: midbrain mantle layer Strong Regionally restricted euxassay_013839_07
Specimen euxassay_013839_08: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Strong Regionally restricted euxassay_013839_08
TS23: vestibulo-cochlear ganglion Strong Regionally restricted euxassay_013839_08
TS23: dorsal root ganglion Strong Regionally restricted euxassay_013839_08
TS23: midbrain mantle layer Strong Regionally restricted euxassay_013839_08
TS23: medulla oblongata basal plate mantle layer Strong Regionally restricted euxassay_013839_08
TS23: dorsal grey horn Strong Regionally restricted euxassay_013839_08
Specimen euxassay_013839_09: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Strong Regionally restricted euxassay_013839_09
TS23: dorsal root ganglion Moderate Regionally restricted euxassay_013839_09
TS23: midbrain mantle layer Strong Regionally restricted euxassay_013839_09
TS23: diencephalon lateral wall mantle layer Strong Regionally restricted euxassay_013839_09
TS23: medulla oblongata basal plate mantle layer Strong Regionally restricted euxassay_013839_09
TS23: dorsal grey horn Strong Regionally restricted euxassay_013839_09
Specimen euxassay_013839_10: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: dorsal root ganglion Moderate Regionally restricted euxassay_013839_10
TS23: midbrain mantle layer Strong Regionally restricted euxassay_013839_10
TS23: medulla oblongata basal plate mantle layer Moderate Regionally restricted euxassay_013839_10
TS23: diencephalon lateral wall mantle layer Strong Regionally restricted euxassay_013839_10
TS23: dorsal grey horn Moderate Regionally restricted euxassay_013839_10
Specimen euxassay_013839_11: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: dorsal root ganglion Moderate Regionally restricted euxassay_013839_11
TS23: midbrain mantle layer Strong Regionally restricted euxassay_013839_11
TS23: medulla oblongata basal plate mantle layer Moderate Regionally restricted euxassay_013839_11
TS23: diencephalon lateral wall mantle layer Strong Regionally restricted euxassay_013839_11
TS23: dorsal grey horn Moderate Regionally restricted euxassay_013839_11
Specimen euxassay_013839_12: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: dorsal root ganglion Strong Regionally restricted euxassay_013839_12
TS23: midbrain mantle layer Strong Regionally restricted euxassay_013839_12
TS23: medulla oblongata basal plate mantle layer Strong Regionally restricted euxassay_013839_12
TS23: diencephalon lateral wall mantle layer Strong Regionally restricted euxassay_013839_12
TS23: dorsal grey horn Moderate Regionally restricted euxassay_013839_12
Specimen euxassay_013839_13: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: dorsal root ganglion Strong Regionally restricted euxassay_013839_13
TS23: midbrain mantle layer Strong Regionally restricted euxassay_013839_13
TS23: diencephalon lateral wall mantle layer Strong Regionally restricted euxassay_013839_13
TS23: dorsal grey horn Weak Regionally restricted euxassay_013839_13
Specimen euxassay_013839_14: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: dorsal root ganglion Strong Regionally restricted euxassay_013839_14
TS23: midbrain mantle layer Strong Regionally restricted euxassay_013839_14
TS23: medulla oblongata basal plate mantle layer Strong Regionally restricted euxassay_013839_14
TS23: dorsal grey horn Moderate Regionally restricted euxassay_013839_14
Specimen euxassay_013839_15: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: dorsal root ganglion Moderate Regionally restricted euxassay_013839_15
TS23: midbrain mantle layer Strong Regionally restricted euxassay_013839_15
TS23: pons mantle layer Strong Regionally restricted euxassay_013839_15
TS23: medulla oblongata basal plate mantle layer Strong Regionally restricted euxassay_013839_15
TS23: dorsal grey horn Moderate Regionally restricted euxassay_013839_15
Specimen euxassay_013839_16: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Strong Regionally restricted euxassay_013839_16
TS23: dorsal root ganglion Moderate Regionally restricted euxassay_013839_16
TS23: pons mantle layer Strong Regionally restricted euxassay_013839_16
TS23: midbrain mantle layer Strong Regionally restricted euxassay_013839_16
TS23: medulla oblongata basal plate mantle layer Moderate Regionally restricted euxassay_013839_16
Specimen euxassay_013839_17: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Strong Regionally restricted euxassay_013839_17
TS23: vestibulo-cochlear ganglion Strong Regionally restricted euxassay_013839_17
TS23: dorsal root ganglion Strong Regionally restricted euxassay_013839_17
TS23: midbrain mantle layer Strong Regionally restricted euxassay_013839_17
TS23: pons mantle layer Strong Regionally restricted euxassay_013839_17
TS23: medulla oblongata basal plate mantle layer Strong Regionally restricted euxassay_013839_17
Specimen euxassay_013839_18: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: glossopharyngeal ganglion Strong Regionally restricted euxassay_013839_18
TS23: trigeminal ganglion Strong Regionally restricted euxassay_013839_18
TS23: vestibulo-cochlear ganglion Strong Regionally restricted euxassay_013839_18
TS23: dorsal root ganglion Strong Regionally restricted euxassay_013839_18
TS23: midbrain mantle layer Moderate Regionally restricted euxassay_013839_18
TS23: pons mantle layer Strong Regionally restricted euxassay_013839_18
TS23: medulla oblongata basal plate mantle layer Strong Regionally restricted euxassay_013839_18
Specimen euxassay_013839_19: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Strong Regionally restricted euxassay_013839_19
TS23: facial ganglion Strong Regionally restricted euxassay_013839_19
TS23: vestibulo-cochlear ganglion Strong Regionally restricted euxassay_013839_19
TS23: dorsal root ganglion Strong Regionally restricted euxassay_013839_19
Specimen euxassay_013839_20: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: facial ganglion Strong Regionally restricted euxassay_013839_20
TS23: trigeminal ganglion Strong Regionally restricted euxassay_013839_20
Specimen euxassay_013839_21: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Strong Regionally restricted euxassay_013839_21
Specimen euxassay_013839_22: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: neural retina Strong Regionally restricted euxassay_013839_22
Specimen euxassay_013839_23: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: neural retina Strong Regionally restricted euxassay_013839_23
Specimen euxassay_013839_24: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: neural retina Moderate Regionally restricted euxassay_013839_24
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
05/21/2024
MGI 6.23 		The Jackson Laboratory