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Gene Expression Data
Assay Details
Assay
Reference: J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
Assay type: RNA in situ
MGI Accession ID: MGI:4827224
Gene symbol: Pitx1
Gene name: paired-like homeodomain transcription factor 1
Probe: MGC clone 13954
Probe preparation: Antisense labelled with digoxigenin RNA
Visualized with: Alkaline phosphatase
Assay notes: Cryosections of fresh frozen material were fixed in 4% paraformaldehyde for 20 min. before further processing. A tyramide-biotin/streptavidin amplification step was included in the in situ hybridization procedure.
Results
Specimen euxassay_006721_01: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: anterior abdominal wall muscle Weak Regionally restricted euxassay_006721_01
TS23: leg Moderate Regionally restricted euxassay_006721_01
Specimen euxassay_006721_02: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: anterior abdominal wall muscle Weak Regionally restricted euxassay_006721_02
TS23: lower leg mesenchyme Moderate Regionally restricted euxassay_006721_02
TS23: upper leg mesenchyme Moderate Regionally restricted euxassay_006721_02
TS23: cornea Moderate Regionally restricted euxassay_006721_02
Specimen euxassay_006721_03: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: anterior abdominal wall muscle Weak Regionally restricted euxassay_006721_03
TS23: stomach Strong Regionally restricted euxassay_006721_03
TS23: mandible Strong Regionally restricted euxassay_006721_03
TS23: lower leg mesenchyme Moderate Regionally restricted euxassay_006721_03
TS23: upper leg mesenchyme Moderate Regionally restricted euxassay_006721_03
TS23: eye Moderate Regionally restricted euxassay_006721_03
Specimen euxassay_006721_04: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: anterior abdominal wall muscle Weak Regionally restricted euxassay_006721_04
TS23: stomach Strong Regionally restricted euxassay_006721_04
TS23: mandible Moderate Regionally restricted euxassay_006721_04
TS23: midbrain mantle layer Strong Single cells euxassay_006721_04
TS23: foot Moderate Regionally restricted euxassay_006721_04
TS23: lower leg mesenchyme Moderate Regionally restricted euxassay_006721_04
TS23: upper leg mesenchyme Moderate Regionally restricted euxassay_006721_04
TS23: eye Moderate Regionally restricted euxassay_006721_04
Specimen euxassay_006721_05: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: anterior abdominal wall muscle Weak Regionally restricted euxassay_006721_05
TS23: stomach Strong Regionally restricted euxassay_006721_05
TS23: vibrissa Weak Regionally restricted euxassay_006721_05
TS23: mandible Moderate Regionally restricted euxassay_006721_05
TS23: oral epithelium Moderate Regionally restricted euxassay_006721_05
TS23: midbrain mantle layer Strong Single cells euxassay_006721_05
TS23: lower leg mesenchyme Moderate Regionally restricted euxassay_006721_05
TS23: upper leg mesenchyme Moderate Regionally restricted euxassay_006721_05
TS23: eye Moderate Regionally restricted euxassay_006721_05
Specimen euxassay_006721_06: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: anterior abdominal wall muscle Weak Regionally restricted euxassay_006721_06
TS23: stomach Strong Regionally restricted euxassay_006721_06
TS23: vibrissa Weak Regionally restricted euxassay_006721_06
TS23: mandible Moderate Regionally restricted euxassay_006721_06
TS23: lower jaw molar Moderate Regionally restricted euxassay_006721_06
TS23: upper jaw molar Moderate Regionally restricted euxassay_006721_06
TS23: lower lip Moderate Regionally restricted euxassay_006721_06
TS23: oral epithelium Moderate Regionally restricted euxassay_006721_06
TS23: midbrain mantle layer Strong Single cells euxassay_006721_06
TS23: lower leg mesenchyme Moderate Regionally restricted euxassay_006721_06
TS23: upper leg mesenchyme Moderate Regionally restricted euxassay_006721_06
Specimen euxassay_006721_07: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: anterior abdominal wall muscle Weak Regionally restricted euxassay_006721_07
TS23: stomach Strong Regionally restricted euxassay_006721_07
TS23: vibrissa Weak Regionally restricted euxassay_006721_07
TS23: mandible Moderate Regionally restricted euxassay_006721_07
TS23: lower jaw molar Moderate Regionally restricted euxassay_006721_07
TS23: upper jaw molar Moderate Regionally restricted euxassay_006721_07
TS23: lower lip Moderate Regionally restricted euxassay_006721_07
TS23: oral epithelium Moderate Regionally restricted euxassay_006721_07
TS23: submandibular gland primordium Moderate Regionally restricted euxassay_006721_07
TS23: midbrain mantle layer Strong Single cells euxassay_006721_07
TS23: upper leg mesenchyme Moderate Regionally restricted euxassay_006721_07
TS23: foot Moderate Regionally restricted euxassay_006721_07
Specimen euxassay_006721_08: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: anterior abdominal wall muscle Weak Regionally restricted euxassay_006721_08
TS23: stomach Moderate Regionally restricted euxassay_006721_08
TS23: olfactory epithelium Weak Regionally restricted euxassay_006721_08
TS23: mandible Moderate Regionally restricted euxassay_006721_08
TS23: lower lip Moderate Regionally restricted euxassay_006721_08
TS23: oral epithelium Moderate Regionally restricted euxassay_006721_08
TS23: submandibular gland primordium Moderate Regionally restricted euxassay_006721_08
TS23: midbrain mantle layer Strong Single cells euxassay_006721_08
TS23: upper leg mesenchyme Moderate Regionally restricted euxassay_006721_08
Specimen euxassay_006721_09: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: anterior abdominal wall muscle Weak Regionally restricted euxassay_006721_09
TS23: stomach Moderate Regionally restricted euxassay_006721_09
TS23: olfactory epithelium Weak Regionally restricted euxassay_006721_09
TS23: mandible Moderate Regionally restricted euxassay_006721_09
TS23: lower lip Moderate Regionally restricted euxassay_006721_09
TS23: oral epithelium Moderate Regionally restricted euxassay_006721_09
TS23: submandibular gland primordium Moderate Regionally restricted euxassay_006721_09
TS23: esophagus epithelium Strong Regionally restricted euxassay_006721_09
Specimen euxassay_006721_10: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: anterior abdominal wall muscle Weak Regionally restricted euxassay_006721_10
TS23: stomach Moderate Regionally restricted euxassay_006721_10
TS23: olfactory epithelium Weak Regionally restricted euxassay_006721_10
TS23: mandible Moderate Regionally restricted euxassay_006721_10
TS23: oral epithelium Moderate Regionally restricted euxassay_006721_10
TS23: lower lip Moderate Regionally restricted euxassay_006721_10
TS23: submandibular gland primordium Moderate Regionally restricted euxassay_006721_10
TS23: esophagus epithelium Strong Regionally restricted euxassay_006721_10
TS23: pharynx epithelium Strong Regionally restricted euxassay_006721_10
TS23: adenohypophysis Moderate Regionally restricted euxassay_006721_10
Specimen euxassay_006721_11: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: anterior abdominal wall muscle Moderate Regionally restricted euxassay_006721_11
TS23: stomach Moderate Regionally restricted euxassay_006721_11
TS23: midgut Moderate Regionally restricted euxassay_006721_11
TS23: olfactory epithelium Moderate Regionally restricted euxassay_006721_11
TS23: upper jaw incisor Moderate Regionally restricted euxassay_006721_11
TS23: mandible Moderate Regionally restricted euxassay_006721_11
TS23: oral epithelium Moderate Regionally restricted euxassay_006721_11
TS23: tongue epithelium Moderate Regionally restricted euxassay_006721_11
TS23: tongue muscle Moderate Regionally restricted euxassay_006721_11
TS23: esophagus epithelium Strong Regionally restricted euxassay_006721_11
TS23: pharynx epithelium Strong Regionally restricted euxassay_006721_11
TS23: adenohypophysis Strong Regionally restricted euxassay_006721_11
Specimen euxassay_006721_12: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: anterior abdominal wall muscle Moderate Regionally restricted euxassay_006721_12
TS23: stomach Moderate Regionally restricted euxassay_006721_12
TS23: midgut Moderate Regionally restricted euxassay_006721_12
TS23: olfactory epithelium Moderate Regionally restricted euxassay_006721_12
TS23: upper jaw incisor Moderate Regionally restricted euxassay_006721_12
TS23: lower jaw incisor Moderate Regionally restricted euxassay_006721_12
TS23: mandible Moderate Regionally restricted euxassay_006721_12
TS23: oral epithelium Moderate Regionally restricted euxassay_006721_12
TS23: tongue muscle Moderate Regionally restricted euxassay_006721_12
TS23: tongue epithelium Moderate Regionally restricted euxassay_006721_12
TS23: frenulum Moderate Regionally restricted euxassay_006721_12
TS23: esophagus epithelium Strong Regionally restricted euxassay_006721_12
TS23: adenohypophysis Strong Regionally restricted euxassay_006721_12
Specimen euxassay_006721_13: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: anterior abdominal wall muscle Moderate Regionally restricted euxassay_006721_13
TS23: midgut Weak Regionally restricted euxassay_006721_13
TS23: olfactory epithelium Moderate Regionally restricted euxassay_006721_13
TS23: upper jaw incisor Moderate Regionally restricted euxassay_006721_13
TS23: oral epithelium Moderate Regionally restricted euxassay_006721_13
TS23: tongue epithelium Moderate Regionally restricted euxassay_006721_13
TS23: frenulum Moderate Regionally restricted euxassay_006721_13
TS23: esophagus epithelium Strong Regionally restricted euxassay_006721_13
TS23: adenohypophysis Strong Regionally restricted euxassay_006721_13
TS23: bladder Moderate Regionally restricted euxassay_006721_13
Specimen euxassay_006721_14: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: anterior abdominal wall muscle Moderate Regionally restricted euxassay_006721_14
TS23: midgut Weak Regionally restricted euxassay_006721_14
TS23: oral epithelium Moderate Regionally restricted euxassay_006721_14
TS23: tongue epithelium Moderate Regionally restricted euxassay_006721_14
TS23: pharynx epithelium Strong Regionally restricted euxassay_006721_14
TS23: adenohypophysis Strong Regionally restricted euxassay_006721_14
TS23: bladder Moderate Regionally restricted euxassay_006721_14
TS23: glans of male genital tubercle Moderate Regionally restricted euxassay_006721_14
Specimen euxassay_006721_15: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: anterior abdominal wall muscle Moderate Regionally restricted euxassay_006721_15
TS23: midgut Weak Regionally restricted euxassay_006721_15
TS23: olfactory epithelium Strong Regionally restricted euxassay_006721_15
TS23: oral epithelium Moderate Regionally restricted euxassay_006721_15
TS23: tongue epithelium Strong Regionally restricted euxassay_006721_15
TS23: frenulum Strong Regionally restricted euxassay_006721_15
TS23: tongue muscle Moderate Regionally restricted euxassay_006721_15
TS23: pharynx epithelium Strong Regionally restricted euxassay_006721_15
TS23: adenohypophysis Strong Regionally restricted euxassay_006721_15
TS23: midbrain mantle layer Strong Single cells euxassay_006721_15
TS23: bladder Moderate Regionally restricted euxassay_006721_15
TS23: glans of male genital tubercle Moderate Regionally restricted euxassay_006721_15
Specimen euxassay_006721_16: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: anterior abdominal wall muscle Moderate Regionally restricted euxassay_006721_16
TS23: midgut Weak Regionally restricted euxassay_006721_16
TS23: olfactory epithelium Moderate Regionally restricted euxassay_006721_16
TS23: lower jaw incisor Moderate Regionally restricted euxassay_006721_16
TS23: mandible Moderate Regionally restricted euxassay_006721_16
TS23: oral epithelium Moderate Regionally restricted euxassay_006721_16
TS23: tongue epithelium Moderate Regionally restricted euxassay_006721_16
TS23: tongue muscle Moderate Regionally restricted euxassay_006721_16
TS23: submandibular gland primordium Moderate Regionally restricted euxassay_006721_16
TS23: pharynx epithelium Strong Regionally restricted euxassay_006721_16
TS23: midbrain mantle layer Strong Single cells euxassay_006721_16
TS23: bladder Moderate Regionally restricted euxassay_006721_16
TS23: glans of male genital tubercle Moderate Regionally restricted euxassay_006721_16
Specimen euxassay_006721_17: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: anterior abdominal wall muscle Moderate Regionally restricted euxassay_006721_17
TS23: midgut Weak Regionally restricted euxassay_006721_17
TS23: olfactory epithelium Moderate Regionally restricted euxassay_006721_17
TS23: upper jaw incisor Moderate Regionally restricted euxassay_006721_17
TS23: mandible Moderate Regionally restricted euxassay_006721_17
TS23: oral epithelium Moderate Regionally restricted euxassay_006721_17
TS23: submandibular gland primordium Moderate Regionally restricted euxassay_006721_17
TS23: midbrain mantle layer Strong Single cells euxassay_006721_17
TS23: bladder Moderate Regionally restricted euxassay_006721_17
Specimen euxassay_006721_18: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: anterior abdominal wall muscle Moderate Regionally restricted euxassay_006721_18
TS23: midgut Weak Regionally restricted euxassay_006721_18
TS23: olfactory epithelium Moderate Regionally restricted euxassay_006721_18
TS23: mandible Moderate Regionally restricted euxassay_006721_18
TS23: oral epithelium Moderate Regionally restricted euxassay_006721_18
TS23: lower lip Moderate Regionally restricted euxassay_006721_18
TS23: submandibular gland primordium Moderate Regionally restricted euxassay_006721_18
TS23: midbrain mantle layer Strong Single cells euxassay_006721_18
Specimen euxassay_006721_19: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: anterior abdominal wall muscle Moderate Regionally restricted euxassay_006721_19
TS23: midgut Weak Regionally restricted euxassay_006721_19
TS23: olfactory epithelium Moderate Regionally restricted euxassay_006721_19
TS23: mandible Moderate Regionally restricted euxassay_006721_19
TS23: oral epithelium Moderate Regionally restricted euxassay_006721_19
TS23: lower lip Moderate Regionally restricted euxassay_006721_19
TS23: submandibular gland primordium Moderate Regionally restricted euxassay_006721_19
Specimen euxassay_006721_20: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: anterior abdominal wall muscle Weak Regionally restricted euxassay_006721_20
TS23: olfactory epithelium Moderate Regionally restricted euxassay_006721_20
TS23: mandible Moderate Regionally restricted euxassay_006721_20
TS23: lower jaw molar Moderate Regionally restricted euxassay_006721_20
TS23: upper jaw molar Moderate Regionally restricted euxassay_006721_20
TS23: oral epithelium Moderate Regionally restricted euxassay_006721_20
TS23: lower lip Moderate Regionally restricted euxassay_006721_20
Specimen euxassay_006721_21: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: anterior abdominal wall muscle Weak Regionally restricted euxassay_006721_21
TS23: olfactory epithelium Moderate Regionally restricted euxassay_006721_21
TS23: mandible Moderate Regionally restricted euxassay_006721_21
TS23: oral epithelium Moderate Regionally restricted euxassay_006721_21
TS23: lower lip Moderate Regionally restricted euxassay_006721_21
TS23: upper leg mesenchyme Moderate Regionally restricted euxassay_006721_21
Specimen euxassay_006721_22: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: anterior abdominal wall muscle Weak Regionally restricted euxassay_006721_22
TS23: mandible Moderate Regionally restricted euxassay_006721_22
TS23: oral epithelium Moderate Regionally restricted euxassay_006721_22
TS23: lower lip Moderate Regionally restricted euxassay_006721_22
TS23: upper leg mesenchyme Moderate Regionally restricted euxassay_006721_22
Specimen euxassay_006721_23: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: anterior abdominal wall muscle Weak Regionally restricted euxassay_006721_23
TS23: mandible Moderate Regionally restricted euxassay_006721_23
TS23: upper leg mesenchyme Moderate Regionally restricted euxassay_006721_23
TS23: eye Moderate Regionally restricted euxassay_006721_23
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Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
05/21/2024
MGI 6.23 		The Jackson Laboratory