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Gene Expression Data
Assay Details
Assay
Reference: J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
Assay type: RNA in situ
MGI Accession ID: MGI:4827085
Gene symbol: Pcdhb3
Gene name: protocadherin beta 3
Probe: MGC clone 90622
Probe preparation: Antisense labelled with digoxigenin RNA
Visualized with: Alkaline phosphatase
Assay notes: Cryosections of fresh frozen material were fixed in 4% paraformaldehyde for 20 min. before further processing. A tyramide-biotin/streptavidin amplification step was included in the in situ hybridization procedure.
Results
Specimen euxassay_007058_01: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: neural retina Strong Regionally restricted euxassay_007058_01
TS23: forebrain Moderate Uniform euxassay_007058_01
Specimen euxassay_007058_02: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: neural retina Strong Regionally restricted euxassay_007058_02
TS23: forebrain Moderate Uniform euxassay_007058_02
Specimen euxassay_007058_03: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: neural retina Strong Regionally restricted euxassay_007058_03
TS23: hindbrain Moderate Uniform euxassay_007058_03
TS23: forebrain Moderate Uniform euxassay_007058_03
Specimen euxassay_007058_04: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: neural retina Strong Regionally restricted euxassay_007058_04
TS23: trigeminal ganglion Strong Regionally restricted euxassay_007058_04
TS23: hindbrain Moderate Uniform euxassay_007058_04
TS23: forebrain Moderate Uniform euxassay_007058_04
Specimen euxassay_007058_05: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Strong Regionally restricted euxassay_007058_05
TS23: facial ganglion Strong Regionally restricted euxassay_007058_05
TS23: hindbrain Moderate Uniform euxassay_007058_05
TS23: forebrain Moderate Uniform euxassay_007058_05
TS23: midbrain Moderate Uniform euxassay_007058_05
Specimen euxassay_007058_06: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Strong Regionally restricted euxassay_007058_06
TS23: facial ganglion Strong Regionally restricted euxassay_007058_06
TS23: forebrain Moderate Uniform euxassay_007058_06
TS23: midbrain Moderate Uniform euxassay_007058_06
TS23: hindbrain Moderate Uniform euxassay_007058_06
Specimen euxassay_007058_07: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Strong Regionally restricted euxassay_007058_07
TS23: facial ganglion Strong Regionally restricted euxassay_007058_07
TS23: forebrain Moderate Uniform euxassay_007058_07
TS23: hindbrain Moderate Uniform euxassay_007058_07
TS23: midbrain Moderate Uniform euxassay_007058_07
Specimen euxassay_007058_08: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: vestibulo-cochlear ganglion Strong Regionally restricted euxassay_007058_08
TS23: trigeminal ganglion Strong Regionally restricted euxassay_007058_08
TS23: glossopharyngeal ganglion Strong Regionally restricted euxassay_007058_08
TS23: midbrain Moderate Uniform euxassay_007058_08
TS23: hindbrain Moderate Uniform euxassay_007058_08
TS23: forebrain Moderate Uniform euxassay_007058_08
Specimen euxassay_007058_09: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: vestibulo-cochlear ganglion Strong Regionally restricted euxassay_007058_09
TS23: glossopharyngeal ganglion Strong Regionally restricted euxassay_007058_09
TS23: trigeminal ganglion Strong Regionally restricted euxassay_007058_09
TS23: midbrain Moderate Uniform euxassay_007058_09
TS23: forebrain Moderate Uniform euxassay_007058_09
TS23: hindbrain Moderate Uniform euxassay_007058_09
Specimen euxassay_007058_10: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: vestibulo-cochlear ganglion Strong Regionally restricted euxassay_007058_10
TS23: trigeminal ganglion Strong Regionally restricted euxassay_007058_10
TS23: glossopharyngeal ganglion Strong Regionally restricted euxassay_007058_10
TS23: dorsal root ganglion Strong Regionally restricted euxassay_007058_10
TS23: midbrain Moderate Uniform euxassay_007058_10
TS23: hindbrain Moderate Uniform euxassay_007058_10
TS23: forebrain Moderate Uniform euxassay_007058_10
Specimen euxassay_007058_11: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal nerve Strong Regionally restricted euxassay_007058_11
TS23: trigeminal ganglion Strong Regionally restricted euxassay_007058_11
TS23: dorsal root ganglion Strong Regionally restricted euxassay_007058_11
TS23: spinal cord Moderate Uniform euxassay_007058_11
TS23: midbrain Moderate Uniform euxassay_007058_11
TS23: hindbrain Moderate Uniform euxassay_007058_11
TS23: forebrain Moderate Uniform euxassay_007058_11
Specimen euxassay_007058_12: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: dorsal root ganglion Strong Regionally restricted euxassay_007058_12
TS23: spinal cord Moderate Uniform euxassay_007058_12
TS23: midbrain Moderate Uniform euxassay_007058_12
TS23: hindbrain Moderate Uniform euxassay_007058_12
TS23: forebrain Moderate Uniform euxassay_007058_12
Specimen euxassay_007058_13: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: dorsal root ganglion Strong Regionally restricted euxassay_007058_13
TS23: spinal cord Moderate Uniform euxassay_007058_13
TS23: hindbrain Moderate Uniform euxassay_007058_13
TS23: midbrain Moderate Uniform euxassay_007058_13
TS23: forebrain Moderate Uniform euxassay_007058_13
Specimen euxassay_007058_14: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: dorsal root ganglion Strong Regionally restricted euxassay_007058_14
TS23: spinal cord Moderate Uniform euxassay_007058_14
TS23: midbrain Moderate Uniform euxassay_007058_14
TS23: hindbrain Moderate Uniform euxassay_007058_14
TS23: forebrain Moderate Uniform euxassay_007058_14
Specimen euxassay_007058_15: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: spinal cord Moderate Uniform euxassay_007058_15
TS23: hindbrain Moderate Uniform euxassay_007058_15
TS23: forebrain Moderate Uniform euxassay_007058_15
TS23: midbrain Moderate Uniform euxassay_007058_15
Specimen euxassay_007058_16: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: spinal cord Moderate Uniform euxassay_007058_16
TS23: midbrain Moderate Uniform euxassay_007058_16
TS23: hindbrain Moderate Uniform euxassay_007058_16
TS23: forebrain Moderate Uniform euxassay_007058_16
Specimen euxassay_007058_17: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: spinal cord Moderate Uniform euxassay_007058_17
TS23: hindbrain Moderate Uniform euxassay_007058_17
TS23: forebrain Moderate Uniform euxassay_007058_17
TS23: midbrain Moderate Uniform euxassay_007058_17
Specimen euxassay_007058_18: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: dorsal root ganglion Moderate Regionally restricted euxassay_007058_18
TS23: midbrain Moderate Uniform euxassay_007058_18
TS23: hindbrain Moderate Uniform euxassay_007058_18
TS23: forebrain Moderate Uniform euxassay_007058_18
TS23: spinal cord Moderate Uniform euxassay_007058_18
Specimen euxassay_007058_19: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal nerve Strong Regionally restricted euxassay_007058_19
TS23: trigeminal ganglion Strong Regionally restricted euxassay_007058_19
TS23: dorsal root ganglion Moderate Regionally restricted euxassay_007058_19
TS23: spinal cord Moderate Uniform euxassay_007058_19
TS23: hindbrain Moderate Uniform euxassay_007058_19
TS23: midbrain Moderate Uniform euxassay_007058_19
TS23: forebrain Moderate Uniform euxassay_007058_19
Specimen euxassay_007058_20: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: glossopharyngeal ganglion Strong Regionally restricted euxassay_007058_20
TS23: trigeminal ganglion Strong Regionally restricted euxassay_007058_20
TS23: vestibulo-cochlear ganglion Strong Regionally restricted euxassay_007058_20
TS23: dorsal root ganglion Strong Regionally restricted euxassay_007058_20
TS23: spinal cord Moderate Uniform euxassay_007058_20
TS23: hindbrain Moderate Uniform euxassay_007058_20
TS23: midbrain Moderate Uniform euxassay_007058_20
TS23: forebrain Moderate Uniform euxassay_007058_20
Specimen euxassay_007058_21: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: vestibulo-cochlear ganglion Strong Regionally restricted euxassay_007058_21
TS23: trigeminal ganglion Strong Regionally restricted euxassay_007058_21
TS23: glossopharyngeal ganglion Strong Regionally restricted euxassay_007058_21
TS23: dorsal root ganglion Strong Regionally restricted euxassay_007058_21
TS23: midbrain Moderate Uniform euxassay_007058_21
TS23: hindbrain Moderate Uniform euxassay_007058_21
TS23: forebrain Moderate Uniform euxassay_007058_21
Specimen euxassay_007058_22: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Strong Regionally restricted euxassay_007058_22
TS23: vestibulo-cochlear ganglion Strong Regionally restricted euxassay_007058_22
TS23: glossopharyngeal ganglion Strong Regionally restricted euxassay_007058_22
TS23: facial ganglion Strong Regionally restricted euxassay_007058_22
TS23: hindbrain Moderate Uniform euxassay_007058_22
TS23: forebrain Moderate Uniform euxassay_007058_22
Specimen euxassay_007058_23: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Strong Regionally restricted euxassay_007058_23
TS23: facial ganglion Strong Regionally restricted euxassay_007058_23
TS23: hindbrain Moderate Uniform euxassay_007058_23
TS23: forebrain Moderate Uniform euxassay_007058_23
Specimen euxassay_007058_24: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Strong Regionally restricted euxassay_007058_24
TS23: facial ganglion Strong Regionally restricted euxassay_007058_24
TS23: forebrain Moderate Uniform euxassay_007058_24
TS23: hindbrain Moderate Uniform euxassay_007058_24
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
05/14/2024
MGI 6.23 		The Jackson Laboratory