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Gene Expression Data
Assay Details
Assay
Reference: J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
Assay type: RNA in situ
MGI Accession ID: MGI:4827079
Gene symbol: Pcdh20
Gene name: protocadherin 20
Probe: T38230
Probe preparation: Antisense labelled with digoxigenin RNA
Visualized with: Alkaline phosphatase
Assay notes: Cryosections of fresh frozen material were fixed in 4% paraformaldehyde for 20 min. before further processing. A tyramide-biotin/streptavidin amplification step was included in the in situ hybridization procedure.
Results
Specimen euxassay_012748_01: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: endolymphatic duct Strong Regionally restricted euxassay_012748_01
TS23: utricle Strong Regionally restricted euxassay_012748_01
TS23: telencephalon mantle layer Weak Regionally restricted euxassay_012748_01
Specimen euxassay_012748_02: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: endolymphatic duct Strong Regionally restricted euxassay_012748_02
TS23: utricle Strong Regionally restricted euxassay_012748_02
TS23: telencephalon mantle layer Weak Regionally restricted euxassay_012748_02
Specimen euxassay_012748_03: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: endolymphatic duct Strong Regionally restricted euxassay_012748_03
TS23: utricle Strong Regionally restricted euxassay_012748_03
TS23: vibrissa Strong Regionally restricted euxassay_012748_03
TS23: telencephalon mantle layer Weak Regionally restricted euxassay_012748_03
Specimen euxassay_012748_04: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: utricle Strong Regionally restricted euxassay_012748_04
TS23: vibrissa Strong Regionally restricted euxassay_012748_04
TS23: telencephalon mantle layer Weak Regionally restricted euxassay_012748_04
Specimen euxassay_012748_05: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: utricle Strong Regionally restricted euxassay_012748_05
TS23: vibrissa Strong Regionally restricted euxassay_012748_05
TS23: telencephalon mantle layer Weak Regionally restricted euxassay_012748_05
TS23: midbrain mantle layer Weak Regionally restricted euxassay_012748_05
TS23: medulla oblongata alar plate mantle layer Weak Regionally restricted euxassay_012748_05
TS23: medulla oblongata basal plate mantle layer Weak Regionally restricted euxassay_012748_05
TS23: rest of cerebellum marginal layer Weak Regionally restricted euxassay_012748_05
TS23: pons mantle layer Weak Regionally restricted euxassay_012748_05
Specimen euxassay_012748_06: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: utricle Strong Regionally restricted euxassay_012748_06
TS23: cochlea Strong Regionally restricted euxassay_012748_06
TS23: telencephalon mantle layer Weak Regionally restricted euxassay_012748_06
TS23: diencephalon lateral wall mantle layer Weak Regionally restricted euxassay_012748_06
TS23: midbrain mantle layer Weak Regionally restricted euxassay_012748_06
TS23: medulla oblongata alar plate mantle layer Weak Regionally restricted euxassay_012748_06
TS23: medulla oblongata basal plate mantle layer Weak Regionally restricted euxassay_012748_06
TS23: rest of cerebellum mantle layer Weak Regionally restricted euxassay_012748_06
TS23: pons mantle layer Weak Regionally restricted euxassay_012748_06
Specimen euxassay_012748_07: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: cochlea Strong Regionally restricted euxassay_012748_07
TS23: diencephalon lateral wall marginal layer Weak Regionally restricted euxassay_012748_07
TS23: telencephalon mantle layer Weak Regionally restricted euxassay_012748_07
TS23: midbrain mantle layer Weak Regionally restricted euxassay_012748_07
TS23: medulla oblongata alar plate mantle layer Weak Regionally restricted euxassay_012748_07
TS23: medulla oblongata basal plate mantle layer Weak Regionally restricted euxassay_012748_07
TS23: rest of cerebellum mantle layer Weak Regionally restricted euxassay_012748_07
TS23: pons mantle layer Weak Regionally restricted euxassay_012748_07
Specimen euxassay_012748_08: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: cochlea Strong Regionally restricted euxassay_012748_08
TS23: diencephalon lateral wall mantle layer Weak Regionally restricted euxassay_012748_08
TS23: telencephalon mantle layer Weak Regionally restricted euxassay_012748_08
TS23: midbrain mantle layer Weak Regionally restricted euxassay_012748_08
TS23: medulla oblongata alar plate mantle layer Weak Regionally restricted euxassay_012748_08
TS23: medulla oblongata basal plate mantle layer Weak Regionally restricted euxassay_012748_08
TS23: rest of cerebellum mantle layer Weak Regionally restricted euxassay_012748_08
TS23: pons mantle layer Weak Regionally restricted euxassay_012748_08
Specimen euxassay_012748_09: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: nasal cavity Strong Regionally restricted euxassay_012748_09
TS23: diencephalon lateral wall mantle layer Weak Regionally restricted euxassay_012748_09
TS23: telencephalon mantle layer Weak Regionally restricted euxassay_012748_09
TS23: midbrain mantle layer Weak Regionally restricted euxassay_012748_09
TS23: medulla oblongata alar plate mantle layer Weak Regionally restricted euxassay_012748_09
TS23: medulla oblongata basal plate mantle layer Weak Regionally restricted euxassay_012748_09
TS23: rest of cerebellum mantle layer Weak Regionally restricted euxassay_012748_09
TS23: pons mantle layer Weak Regionally restricted euxassay_012748_09
TS23: spinal cord mantle layer Weak Regionally restricted euxassay_012748_09
Specimen euxassay_012748_10: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: diencephalon lateral wall mantle layer Weak Regionally restricted euxassay_012748_10
TS23: telencephalon mantle layer Weak Regionally restricted euxassay_012748_10
TS23: midbrain mantle layer Weak Regionally restricted euxassay_012748_10
TS23: medulla oblongata alar plate mantle layer Weak Regionally restricted euxassay_012748_10
TS23: medulla oblongata basal plate mantle layer Weak Regionally restricted euxassay_012748_10
TS23: rest of cerebellum mantle layer Weak Regionally restricted euxassay_012748_10
TS23: pons mantle layer Weak Regionally restricted euxassay_012748_10
TS23: spinal cord mantle layer Weak Regionally restricted euxassay_012748_10
Specimen euxassay_012748_11: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: nasal cavity Strong Regionally restricted euxassay_012748_11
TS23: diencephalon lateral wall mantle layer Weak Regionally restricted euxassay_012748_11
TS23: telencephalon mantle layer Weak Regionally restricted euxassay_012748_11
TS23: midbrain mantle layer Weak Regionally restricted euxassay_012748_11
TS23: medulla oblongata alar plate mantle layer Weak Regionally restricted euxassay_012748_11
TS23: medulla oblongata basal plate mantle layer Weak Regionally restricted euxassay_012748_11
TS23: rest of cerebellum mantle layer Weak Regionally restricted euxassay_012748_11
TS23: pons mantle layer Weak Regionally restricted euxassay_012748_11
TS23: spinal cord mantle layer Weak Regionally restricted euxassay_012748_11
Specimen euxassay_012748_12: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: nasal cavity Strong Regionally restricted euxassay_012748_12
TS23: diencephalon lateral wall mantle layer Weak Regionally restricted euxassay_012748_12
TS23: telencephalon mantle layer Weak Regionally restricted euxassay_012748_12
TS23: midbrain mantle layer Weak Regionally restricted euxassay_012748_12
TS23: medulla oblongata alar plate mantle layer Weak Regionally restricted euxassay_012748_12
TS23: medulla oblongata basal plate mantle layer Weak Regionally restricted euxassay_012748_12
TS23: rest of cerebellum mantle layer Weak Regionally restricted euxassay_012748_12
TS23: pons mantle layer Weak Regionally restricted euxassay_012748_12
TS23: spinal cord mantle layer Weak Regionally restricted euxassay_012748_12
Specimen euxassay_012748_13: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: sublingual gland primordium Strong Regionally restricted euxassay_012748_13
TS23: diencephalon lateral wall mantle layer Weak Regionally restricted euxassay_012748_13
TS23: telencephalon mantle layer Weak Regionally restricted euxassay_012748_13
TS23: midbrain mantle layer Weak Regionally restricted euxassay_012748_13
TS23: medulla oblongata alar plate mantle layer Weak Regionally restricted euxassay_012748_13
TS23: medulla oblongata basal plate mantle layer Weak Regionally restricted euxassay_012748_13
TS23: rest of cerebellum mantle layer Weak Regionally restricted euxassay_012748_13
TS23: pons mantle layer Weak Regionally restricted euxassay_012748_13
TS23: spinal cord mantle layer Weak Regionally restricted euxassay_012748_13
Specimen euxassay_012748_14: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: cochlea Strong Regionally restricted euxassay_012748_14
TS23: sublingual gland primordium Moderate Regionally restricted euxassay_012748_14
TS23: diencephalon lateral wall mantle layer Weak Regionally restricted euxassay_012748_14
TS23: telencephalon mantle layer Weak Regionally restricted euxassay_012748_14
TS23: midbrain mantle layer Weak Regionally restricted euxassay_012748_14
TS23: medulla oblongata alar plate mantle layer Weak Regionally restricted euxassay_012748_14
TS23: medulla oblongata basal plate mantle layer Weak Regionally restricted euxassay_012748_14
TS23: rest of cerebellum mantle layer Weak Regionally restricted euxassay_012748_14
TS23: pons mantle layer Weak Regionally restricted euxassay_012748_14
Specimen euxassay_012748_15: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: cochlea Strong Regionally restricted euxassay_012748_15
TS23: nasal cavity Strong Regionally restricted euxassay_012748_15
TS23: sublingual gland primordium Strong Regionally restricted euxassay_012748_15
TS23: diencephalon lateral wall mantle layer Weak Regionally restricted euxassay_012748_15
TS23: telencephalon mantle layer Weak Regionally restricted euxassay_012748_15
TS23: midbrain mantle layer Weak Regionally restricted euxassay_012748_15
TS23: rest of cerebellum mantle layer Weak Regionally restricted euxassay_012748_15
TS23: pons mantle layer Weak Regionally restricted euxassay_012748_15
TS23: medulla oblongata alar plate mantle layer Weak Regionally restricted euxassay_012748_15
TS23: medulla oblongata basal plate mantle layer Weak Regionally restricted euxassay_012748_15
Specimen euxassay_012748_16: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: cochlea Strong Regionally restricted euxassay_012748_16
TS23: utricle Strong Regionally restricted euxassay_012748_16
TS23: diencephalon lateral wall mantle layer Weak Regionally restricted euxassay_012748_16
TS23: telencephalon mantle layer Weak Regionally restricted euxassay_012748_16
TS23: midbrain mantle layer Weak Regionally restricted euxassay_012748_16
TS23: rest of cerebellum mantle layer Weak Regionally restricted euxassay_012748_16
TS23: pons mantle layer Weak Regionally restricted euxassay_012748_16
Specimen euxassay_012748_17: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: cochlea Strong Regionally restricted euxassay_012748_17
TS23: utricle Strong Regionally restricted euxassay_012748_17
TS23: telencephalon mantle layer Weak Regionally restricted euxassay_012748_17
Specimen euxassay_012748_18: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: utricle Strong Regionally restricted euxassay_012748_18
TS23: endolymphatic duct Strong Regionally restricted euxassay_012748_18
TS23: vibrissa Strong Regionally restricted euxassay_012748_18
TS23: telencephalon mantle layer Weak Regionally restricted euxassay_012748_18
Specimen euxassay_012748_19: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: endolymphatic duct Strong Regionally restricted euxassay_012748_19
TS23: utricle Strong Regionally restricted euxassay_012748_19
TS23: vibrissa Strong Regionally restricted euxassay_012748_19
TS23: telencephalon mantle layer Weak Regionally restricted euxassay_012748_19
Specimen euxassay_012748_20: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: endolymphatic duct Strong Regionally restricted euxassay_012748_20
TS23: utricle Strong Regionally restricted euxassay_012748_20
TS23: vibrissa Strong Regionally restricted euxassay_012748_20
TS23: telencephalon mantle layer Weak Regionally restricted euxassay_012748_20
Specimen euxassay_012748_21: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: endolymphatic duct Strong Regionally restricted euxassay_012748_21
TS23: vibrissa Strong Regionally restricted euxassay_012748_21
TS23: telencephalon mantle layer Weak Regionally restricted euxassay_012748_21
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
05/21/2024
MGI 6.23 		The Jackson Laboratory