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Gene Expression Data
Assay Details
Assay
Reference: J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
Assay type: RNA in situ
MGI Accession ID: MGI:4826793
Gene symbol: Nrip3
Gene name: nuclear receptor interacting protein 3
Probe: MGC clone 99851
Probe preparation: Antisense labelled with digoxigenin RNA
Visualized with: Alkaline phosphatase
Assay notes: Cryosections of fresh frozen material were fixed in 4% paraformaldehyde for 20 min. before further processing. A tyramide-biotin/streptavidin amplification step was included in the in situ hybridization procedure.
Results
Specimen euxassay_008471_01: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon mantle layer Strong Regionally restricted euxassay_008471_01
TS23: embryo mesenchyme Weak Regionally restricted euxassay_008471_01

Specimen euxassay_008471_02: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon mantle layer Strong Regionally restricted euxassay_008471_02
TS23: embryo mesenchyme Weak Regionally restricted euxassay_008471_02

Specimen euxassay_008471_03: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon mantle layer Strong Regionally restricted euxassay_008471_03
TS23: embryo mesenchyme Weak Regionally restricted euxassay_008471_03

Specimen euxassay_008471_04: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon mantle layer Strong Regionally restricted euxassay_008471_04
TS23: embryo mesenchyme Weak Regionally restricted euxassay_008471_04

Specimen euxassay_008471_05: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon mantle layer Strong Regionally restricted euxassay_008471_05
TS23: rest of cerebellum mantle layer Strong Regionally restricted euxassay_008471_05
TS23: rest of cerebellum marginal layer Strong Regionally restricted euxassay_008471_05
TS23: pons mantle layer Strong Regionally restricted euxassay_008471_05
TS23: trigeminal ganglion Strong Regionally restricted euxassay_008471_05
TS23: facial ganglion Strong Regionally restricted euxassay_008471_05
TS23: embryo mesenchyme Weak Regionally restricted euxassay_008471_05

Specimen euxassay_008471_06: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon mantle layer Strong Regionally restricted euxassay_008471_06
TS23: rest of cerebellum mantle layer Strong Regionally restricted euxassay_008471_06
TS23: rest of cerebellum marginal layer Strong Regionally restricted euxassay_008471_06
TS23: pons mantle layer Strong Regionally restricted euxassay_008471_06
TS23: trigeminal ganglion Strong Regionally restricted euxassay_008471_06
TS23: facial ganglion Strong Regionally restricted euxassay_008471_06
TS23: vibrissa Strong Regionally restricted euxassay_008471_06
TS23: embryo mesenchyme Weak Regionally restricted euxassay_008471_06

Specimen euxassay_008471_07: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon mantle layer Strong Regionally restricted euxassay_008471_07
TS23: rest of cerebellum mantle layer Strong Regionally restricted euxassay_008471_07
TS23: rest of cerebellum marginal layer Strong Regionally restricted euxassay_008471_07
TS23: pons mantle layer Strong Regionally restricted euxassay_008471_07
TS23: trigeminal ganglion Strong Regionally restricted euxassay_008471_07
TS23: vibrissa Strong Regionally restricted euxassay_008471_07
TS23: rib Strong Regionally restricted euxassay_008471_07
TS23: embryo mesenchyme Weak Regionally restricted euxassay_008471_07

Specimen euxassay_008471_08: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon mantle layer Strong Regionally restricted euxassay_008471_08
TS23: olfactory cortex mantle layer Strong Regionally restricted euxassay_008471_08
TS23: medulla oblongata alar plate mantle layer Strong Regionally restricted euxassay_008471_08
TS23: medulla oblongata basal plate mantle layer Strong Regionally restricted euxassay_008471_08
TS23: rest of cerebellum mantle layer Strong Regionally restricted euxassay_008471_08
TS23: rest of cerebellum marginal layer Strong Regionally restricted euxassay_008471_08
TS23: pons mantle layer Strong Regionally restricted euxassay_008471_08
TS23: trigeminal ganglion Strong Regionally restricted euxassay_008471_08
TS23: facial ganglion Strong Regionally restricted euxassay_008471_08
TS23: vibrissa Strong Regionally restricted euxassay_008471_08
TS23: rib Strong Regionally restricted euxassay_008471_08
TS23: embryo mesenchyme Weak Regionally restricted euxassay_008471_08

Specimen euxassay_008471_09: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: olfactory cortex mantle layer Strong Regionally restricted euxassay_008471_09
TS23: telencephalon mantle layer Strong Regionally restricted euxassay_008471_09
TS23: diencephalon lateral wall mantle layer Strong Regionally restricted euxassay_008471_09
TS23: midbrain mantle layer Strong Regionally restricted euxassay_008471_09
TS23: medulla oblongata alar plate mantle layer Strong Regionally restricted euxassay_008471_09
TS23: medulla oblongata basal plate mantle layer Strong Regionally restricted euxassay_008471_09
TS23: rest of cerebellum mantle layer Strong Regionally restricted euxassay_008471_09
TS23: rest of cerebellum marginal layer Strong Regionally restricted euxassay_008471_09
TS23: pons mantle layer Strong Regionally restricted euxassay_008471_09
TS23: dorsal root ganglion Strong Spotted euxassay_008471_09
TS23: trigeminal ganglion Strong Regionally restricted euxassay_008471_09
TS23: vibrissa Strong Regionally restricted euxassay_008471_09
TS23: submandibular gland primordium Strong Regionally restricted euxassay_008471_09
TS23: rib Strong Regionally restricted euxassay_008471_09
TS23: brachial plexus Strong Regionally restricted euxassay_008471_09
TS23: embryo mesenchyme Weak Regionally restricted euxassay_008471_09

Specimen euxassay_008471_10: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: diencephalon lateral wall mantle layer Strong Regionally restricted euxassay_008471_10
TS23: olfactory cortex mantle layer Strong Regionally restricted euxassay_008471_10
TS23: telencephalon mantle layer Strong Regionally restricted euxassay_008471_10
TS23: midbrain mantle layer Strong Regionally restricted euxassay_008471_10
TS23: medulla oblongata alar plate mantle layer Strong Regionally restricted euxassay_008471_10
TS23: medulla oblongata basal plate mantle layer Strong Regionally restricted euxassay_008471_10
TS23: rest of cerebellum mantle layer Strong Regionally restricted euxassay_008471_10
TS23: rest of cerebellum marginal layer Strong Regionally restricted euxassay_008471_10
TS23: pons mantle layer Strong Regionally restricted euxassay_008471_10
TS23: spinal cord mantle layer Strong Regionally restricted euxassay_008471_10
TS23: dorsal root ganglion Strong Spotted euxassay_008471_10
TS23: trigeminal ganglion Strong Regionally restricted euxassay_008471_10
TS23: vibrissa Strong Regionally restricted euxassay_008471_10
TS23: olfactory epithelium Moderate Regionally restricted euxassay_008471_10
TS23: submandibular gland primordium Strong Regionally restricted euxassay_008471_10
TS23: rib Strong Regionally restricted euxassay_008471_10
TS23: brachial plexus Strong Regionally restricted euxassay_008471_10

Specimen euxassay_008471_11: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: diencephalon lateral wall mantle layer Strong Regionally restricted euxassay_008471_11
TS23: telencephalon mantle layer Strong Regionally restricted euxassay_008471_11
TS23: olfactory cortex mantle layer Strong Regionally restricted euxassay_008471_11
TS23: midbrain mantle layer Strong Regionally restricted euxassay_008471_11
TS23: medulla oblongata alar plate mantle layer Strong Regionally restricted euxassay_008471_11
TS23: medulla oblongata basal plate mantle layer Strong Regionally restricted euxassay_008471_11
TS23: rest of cerebellum mantle layer Strong Regionally restricted euxassay_008471_11
TS23: rest of cerebellum marginal layer Strong Regionally restricted euxassay_008471_11
TS23: pons mantle layer Strong Regionally restricted euxassay_008471_11
TS23: spinal cord mantle layer Strong Regionally restricted euxassay_008471_11
TS23: trigeminal ganglion Strong Regionally restricted euxassay_008471_11
TS23: olfactory epithelium Strong Regionally restricted euxassay_008471_11
TS23: submandibular gland primordium Strong Regionally restricted euxassay_008471_11
TS23: rib Strong Regionally restricted euxassay_008471_11
TS23: ureter Strong Regionally restricted euxassay_008471_11
TS23: brachial plexus Strong Regionally restricted euxassay_008471_11
TS23: embryo mesenchyme Weak Regionally restricted euxassay_008471_11

Specimen euxassay_008471_12: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: diencephalon lateral wall mantle layer Strong Regionally restricted euxassay_008471_12
TS23: olfactory cortex mantle layer Strong Regionally restricted euxassay_008471_12
TS23: telencephalon mantle layer Strong Regionally restricted euxassay_008471_12
TS23: midbrain mantle layer Strong Regionally restricted euxassay_008471_12
TS23: medulla oblongata alar plate mantle layer Strong Regionally restricted euxassay_008471_12
TS23: medulla oblongata basal plate mantle layer Strong Regionally restricted euxassay_008471_12
TS23: rest of cerebellum mantle layer Strong Regionally restricted euxassay_008471_12
TS23: rest of cerebellum marginal layer Strong Regionally restricted euxassay_008471_12
TS23: pons mantle layer Strong Regionally restricted euxassay_008471_12
TS23: spinal cord mantle layer Strong Regionally restricted euxassay_008471_12
TS23: olfactory epithelium Strong Regionally restricted euxassay_008471_12
TS23: rib Strong Regionally restricted euxassay_008471_12
TS23: ureter Strong Regionally restricted euxassay_008471_12
TS23: tongue Strong Regionally restricted euxassay_008471_12
TS23: embryo mesenchyme Weak Regionally restricted euxassay_008471_12

Specimen euxassay_008471_13: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: diencephalon lateral wall mantle layer Strong Regionally restricted euxassay_008471_13
TS23: telencephalon mantle layer Strong Regionally restricted euxassay_008471_13
TS23: olfactory cortex mantle layer Strong Regionally restricted euxassay_008471_13
TS23: midbrain mantle layer Strong Regionally restricted euxassay_008471_13
TS23: medulla oblongata alar plate mantle layer Strong Regionally restricted euxassay_008471_13
TS23: medulla oblongata basal plate mantle layer Strong Regionally restricted euxassay_008471_13
TS23: rest of cerebellum mantle layer Strong Regionally restricted euxassay_008471_13
TS23: rest of cerebellum marginal layer Strong Regionally restricted euxassay_008471_13
TS23: pons mantle layer Strong Regionally restricted euxassay_008471_13
TS23: spinal cord mantle layer Strong Regionally restricted euxassay_008471_13
TS23: olfactory epithelium Strong Regionally restricted euxassay_008471_13
TS23: rib Strong Regionally restricted euxassay_008471_13
TS23: ureter Strong Regionally restricted euxassay_008471_13
TS23: tongue Strong Regionally restricted euxassay_008471_13
TS23: brachial plexus Strong Regionally restricted euxassay_008471_13
TS23: embryo mesenchyme Weak Regionally restricted euxassay_008471_13

Specimen euxassay_008471_14: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: diencephalon lateral wall mantle layer Strong Regionally restricted euxassay_008471_14
TS23: telencephalon mantle layer Strong Regionally restricted euxassay_008471_14
TS23: olfactory cortex mantle layer Strong Regionally restricted euxassay_008471_14
TS23: midbrain mantle layer Strong Regionally restricted euxassay_008471_14
TS23: medulla oblongata alar plate mantle layer Strong Regionally restricted euxassay_008471_14
TS23: medulla oblongata basal plate mantle layer Strong Regionally restricted euxassay_008471_14
TS23: rest of cerebellum mantle layer Strong Regionally restricted euxassay_008471_14
TS23: rest of cerebellum marginal layer Strong Regionally restricted euxassay_008471_14
TS23: pons mantle layer Strong Regionally restricted euxassay_008471_14
TS23: spinal cord mantle layer Strong Regionally restricted euxassay_008471_14
TS23: olfactory epithelium Strong Regionally restricted euxassay_008471_14
TS23: rib Strong Regionally restricted euxassay_008471_14
TS23: tongue Strong Regionally restricted euxassay_008471_14
TS23: embryo mesenchyme Weak Regionally restricted euxassay_008471_14

Specimen euxassay_008471_15: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: diencephalon lateral wall mantle layer Strong Regionally restricted euxassay_008471_15
TS23: telencephalon mantle layer Strong Regionally restricted euxassay_008471_15
TS23: olfactory cortex mantle layer Strong Regionally restricted euxassay_008471_15
TS23: midbrain mantle layer Strong Regionally restricted euxassay_008471_15
TS23: medulla oblongata alar plate mantle layer Strong Regionally restricted euxassay_008471_15
TS23: medulla oblongata basal plate mantle layer Strong Regionally restricted euxassay_008471_15
TS23: rest of cerebellum mantle layer Strong Regionally restricted euxassay_008471_15
TS23: rest of cerebellum marginal layer Strong Regionally restricted euxassay_008471_15
TS23: pons mantle layer Strong Regionally restricted euxassay_008471_15
TS23: spinal cord mantle layer Strong Regionally restricted euxassay_008471_15
TS23: tongue Strong Regionally restricted euxassay_008471_15
TS23: embryo mesenchyme Strong Regionally restricted euxassay_008471_15

Specimen euxassay_008471_16: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: diencephalon lateral wall mantle layer Strong Regionally restricted euxassay_008471_16
TS23: telencephalon mantle layer Strong Regionally restricted euxassay_008471_16
TS23: midbrain mantle layer Strong Regionally restricted euxassay_008471_16
TS23: medulla oblongata alar plate mantle layer Strong Regionally restricted euxassay_008471_16
TS23: medulla oblongata basal plate mantle layer Strong Regionally restricted euxassay_008471_16
TS23: rest of cerebellum mantle layer Strong Regionally restricted euxassay_008471_16
TS23: rest of cerebellum marginal layer Strong Regionally restricted euxassay_008471_16
TS23: pons mantle layer Strong Regionally restricted euxassay_008471_16
TS23: spinal cord mantle layer Strong Regionally restricted euxassay_008471_16
TS23: rib Strong Regionally restricted euxassay_008471_16
TS23: tongue Strong Regionally restricted euxassay_008471_16
TS23: embryo mesenchyme Strong Regionally restricted euxassay_008471_16

Specimen euxassay_008471_17: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: diencephalon lateral wall mantle layer Strong Regionally restricted euxassay_008471_17
TS23: telencephalon mantle layer Strong Regionally restricted euxassay_008471_17
TS23: midbrain mantle layer Strong Regionally restricted euxassay_008471_17
TS23: medulla oblongata alar plate mantle layer Strong Regionally restricted euxassay_008471_17
TS23: medulla oblongata basal plate mantle layer Strong Regionally restricted euxassay_008471_17
TS23: rest of cerebellum mantle layer Strong Regionally restricted euxassay_008471_17
TS23: rest of cerebellum marginal layer Strong Regionally restricted euxassay_008471_17
TS23: pons mantle layer Strong Regionally restricted euxassay_008471_17
TS23: spinal cord mantle layer Strong Regionally restricted euxassay_008471_17
TS23: rib Strong Regionally restricted euxassay_008471_17
TS23: ureter Strong Regionally restricted euxassay_008471_17
TS23: tongue Strong Regionally restricted euxassay_008471_17
TS23: brachial plexus Strong Regionally restricted euxassay_008471_17
TS23: embryo mesenchyme Strong Regionally restricted euxassay_008471_17

Specimen euxassay_008471_18: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: diencephalon lateral wall mantle layer Strong Regionally restricted euxassay_008471_18
TS23: olfactory cortex mantle layer Strong Regionally restricted euxassay_008471_18
TS23: telencephalon mantle layer Strong Regionally restricted euxassay_008471_18
TS23: midbrain mantle layer Strong Regionally restricted euxassay_008471_18
TS23: medulla oblongata alar plate mantle layer Strong Regionally restricted euxassay_008471_18
TS23: medulla oblongata basal plate mantle layer Strong Regionally restricted euxassay_008471_18
TS23: rest of cerebellum mantle layer Strong Regionally restricted euxassay_008471_18
TS23: rest of cerebellum marginal layer Strong Regionally restricted euxassay_008471_18
TS23: pons mantle layer Strong Regionally restricted euxassay_008471_18
TS23: spinal cord mantle layer Strong Regionally restricted euxassay_008471_18
TS23: dorsal root ganglion Strong Spotted euxassay_008471_18
TS23: olfactory epithelium Strong Regionally restricted euxassay_008471_18
TS23: submandibular gland primordium Moderate Regionally restricted euxassay_008471_18
TS23: rib Strong Regionally restricted euxassay_008471_18
TS23: ureter Strong Regionally restricted euxassay_008471_18
TS23: brachial plexus Strong Regionally restricted euxassay_008471_18
TS23: lumbosacral plexus Strong Regionally restricted euxassay_008471_18
TS23: embryo mesenchyme Weak Regionally restricted euxassay_008471_18

Specimen euxassay_008471_19: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: diencephalon lateral wall mantle layer Strong Regionally restricted euxassay_008471_19
TS23: telencephalon mantle layer Strong Regionally restricted euxassay_008471_19
TS23: olfactory cortex mantle layer Strong Regionally restricted euxassay_008471_19
TS23: midbrain mantle layer Strong Regionally restricted euxassay_008471_19
TS23: medulla oblongata alar plate mantle layer Strong Regionally restricted euxassay_008471_19
TS23: medulla oblongata basal plate mantle layer Strong Regionally restricted euxassay_008471_19
TS23: rest of cerebellum mantle layer Strong Regionally restricted euxassay_008471_19
TS23: pons mantle layer Strong Regionally restricted euxassay_008471_19
TS23: rest of cerebellum marginal layer Strong Regionally restricted euxassay_008471_19
TS23: dorsal root ganglion Strong Spotted euxassay_008471_19
TS23: olfactory epithelium Moderate Regionally restricted euxassay_008471_19
TS23: submandibular gland primordium Moderate Regionally restricted euxassay_008471_19
TS23: rib Strong Regionally restricted euxassay_008471_19
TS23: ureter Strong Regionally restricted euxassay_008471_19
TS23: brachial plexus Strong Regionally restricted euxassay_008471_19
TS23: embryo mesenchyme Weak Regionally restricted euxassay_008471_19

Specimen euxassay_008471_20: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: diencephalon lateral wall mantle layer Strong Regionally restricted euxassay_008471_20
TS23: telencephalon mantle layer Strong Regionally restricted euxassay_008471_20
TS23: olfactory cortex mantle layer Strong Regionally restricted euxassay_008471_20
TS23: midbrain mantle layer Strong Regionally restricted euxassay_008471_20
TS23: rest of cerebellum mantle layer Strong Regionally restricted euxassay_008471_20
TS23: rest of cerebellum marginal layer Strong Regionally restricted euxassay_008471_20
TS23: pons mantle layer Strong Regionally restricted euxassay_008471_20
TS23: medulla oblongata alar plate mantle layer Strong Regionally restricted euxassay_008471_20
TS23: medulla oblongata basal plate mantle layer Strong Regionally restricted euxassay_008471_20
TS23: trigeminal ganglion Strong Regionally restricted euxassay_008471_20
TS23: olfactory epithelium Moderate Regionally restricted euxassay_008471_20
TS23: submandibular gland primordium Moderate Regionally restricted euxassay_008471_20
TS23: rib Strong Regionally restricted euxassay_008471_20
TS23: ureter Strong Regionally restricted euxassay_008471_20
TS23: brachial plexus Strong Regionally restricted euxassay_008471_20
TS23: embryo mesenchyme Weak Regionally restricted euxassay_008471_20

Specimen euxassay_008471_21: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: diencephalon lateral wall mantle layer Strong Regionally restricted euxassay_008471_21
TS23: telencephalon mantle layer Strong Regionally restricted euxassay_008471_21
TS23: olfactory cortex mantle layer Strong Regionally restricted euxassay_008471_21
TS23: midbrain mantle layer Strong Regionally restricted euxassay_008471_21
TS23: rest of cerebellum mantle layer Strong Regionally restricted euxassay_008471_21
TS23: rest of cerebellum marginal layer Strong Regionally restricted euxassay_008471_21
TS23: pons mantle layer Strong Regionally restricted euxassay_008471_21
TS23: trigeminal ganglion Strong Regionally restricted euxassay_008471_21
TS23: olfactory epithelium Moderate Regionally restricted euxassay_008471_21
TS23: submandibular gland primordium Moderate Regionally restricted euxassay_008471_21
TS23: rib Strong Regionally restricted euxassay_008471_21
TS23: embryo mesenchyme Weak Regionally restricted euxassay_008471_21

Specimen euxassay_008471_22: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon mantle layer Strong Regionally restricted euxassay_008471_22
TS23: rest of cerebellum mantle layer Strong Regionally restricted euxassay_008471_22
TS23: rest of cerebellum marginal layer Strong Regionally restricted euxassay_008471_22
TS23: pons mantle layer Strong Regionally restricted euxassay_008471_22
TS23: trigeminal ganglion Strong Regionally restricted euxassay_008471_22
TS23: olfactory epithelium Moderate Regionally restricted euxassay_008471_22
TS23: rib Moderate Regionally restricted euxassay_008471_22
TS23: embryo mesenchyme Weak Regionally restricted euxassay_008471_22

Specimen euxassay_008471_23: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon mantle layer Strong Regionally restricted euxassay_008471_23
TS23: rest of cerebellum mantle layer Strong Regionally restricted euxassay_008471_23
TS23: rest of cerebellum marginal layer Strong Regionally restricted euxassay_008471_23
TS23: trigeminal ganglion Strong Regionally restricted euxassay_008471_23
TS23: vibrissa Strong Regionally restricted euxassay_008471_23
TS23: rib Moderate Regionally restricted euxassay_008471_23
TS23: embryo mesenchyme Weak Regionally restricted euxassay_008471_23

Specimen euxassay_008471_24: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon mantle layer Strong Regionally restricted euxassay_008471_24
TS23: trigeminal ganglion Strong Regionally restricted euxassay_008471_24
TS23: vibrissa Strong Regionally restricted euxassay_008471_24
TS23: embryo mesenchyme Weak Regionally restricted euxassay_008471_24


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Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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last database update
10/22/2024
MGI 6.24
The Jackson Laboratory