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Gene Expression Data
Assay Details
Assay
Reference: J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
Assay type: RNA in situ
MGI Accession ID: MGI:4825990
Gene symbol: Carmil3
Gene name: capping protein regulator and myosin 1 linker 3
Probe: T36025
Probe preparation: Antisense labelled with digoxigenin RNA
Visualized with: Alkaline phosphatase
Assay notes: Cryosections of fresh frozen material were fixed in 4% paraformaldehyde for 20 min. before further processing. A tyramide-biotin/streptavidin amplification step was included in the in situ hybridization procedure.
Results
Specimen euxassay_008003_01: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_008003_01
Specimen euxassay_008003_02: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_008003_02
Specimen euxassay_008003_03: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_008003_03
TS23: metencephalon rest of alar plate mantle layer Weak Regionally restricted euxassay_008003_03
Specimen euxassay_008003_04: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_008003_04
TS23: metencephalon rest of alar plate mantle layer Weak Regionally restricted euxassay_008003_04
TS23: midbrain mantle layer Weak Regionally restricted euxassay_008003_04
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_008003_04
Specimen euxassay_008003_05: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_008003_05
TS23: midbrain mantle layer Moderate Regionally restricted euxassay_008003_05
TS23: metencephalon rest of alar plate mantle layer Moderate Regionally restricted euxassay_008003_05
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_008003_05
Specimen euxassay_008003_06: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_008003_06
TS23: diencephalon lateral wall mantle layer Moderate Regionally restricted euxassay_008003_06
TS23: metencephalon rest of alar plate mantle layer Moderate Regionally restricted euxassay_008003_06
TS23: pons mantle layer Moderate Regionally restricted euxassay_008003_06
TS23: midbrain mantle layer Moderate Regionally restricted euxassay_008003_06
TS23: medulla oblongata basal plate mantle layer Weak Regionally restricted euxassay_008003_06
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_008003_06
TS23: vestibulo-cochlear ganglion Moderate Regionally restricted euxassay_008003_06
TS23: glossopharyngeal ganglion Moderate Regionally restricted euxassay_008003_06
TS23: dorsal root ganglion Moderate Regionally restricted euxassay_008003_06
Specimen euxassay_008003_07: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_008003_07
TS23: extraembryonic component Moderate Regionally restricted euxassay_008003_07
TS23: diencephalon lateral wall mantle layer Moderate Regionally restricted euxassay_008003_07
TS23: metencephalon rest of alar plate mantle layer Moderate Regionally restricted euxassay_008003_07
TS23: pons mantle layer Moderate Regionally restricted euxassay_008003_07
TS23: midbrain mantle layer Moderate Regionally restricted euxassay_008003_07
TS23: medulla oblongata basal plate mantle layer Weak Regionally restricted euxassay_008003_07
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_008003_07
TS23: glossopharyngeal ganglion Moderate Regionally restricted euxassay_008003_07
TS23: vestibulo-cochlear ganglion Moderate Regionally restricted euxassay_008003_07
TS23: dorsal root ganglion Moderate Regionally restricted euxassay_008003_07
Specimen euxassay_008003_08: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: diencephalon lateral wall mantle layer Moderate Regionally restricted euxassay_008003_08
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_008003_08
TS23: metencephalon rest of alar plate mantle layer Moderate Regionally restricted euxassay_008003_08
TS23: pons mantle layer Moderate Regionally restricted euxassay_008003_08
TS23: midbrain mantle layer Moderate Regionally restricted euxassay_008003_08
TS23: medulla oblongata basal plate mantle layer Moderate Regionally restricted euxassay_008003_08
TS23: spinal cord mantle layer Moderate Regionally restricted euxassay_008003_08
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_008003_08
TS23: vagus ganglion Moderate Regionally restricted euxassay_008003_08
TS23: vestibulo-cochlear ganglion Moderate Regionally restricted euxassay_008003_08
TS23: dorsal root ganglion Moderate Regionally restricted euxassay_008003_08
Specimen euxassay_008003_09: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_008003_09
TS23: diencephalon lateral wall mantle layer Moderate Regionally restricted euxassay_008003_09
TS23: hypothalamus mantle layer Moderate Regionally restricted euxassay_008003_09
TS23: metencephalon rest of alar plate mantle layer Moderate Regionally restricted euxassay_008003_09
TS23: pons mantle layer Moderate Regionally restricted euxassay_008003_09
TS23: midbrain mantle layer Moderate Regionally restricted euxassay_008003_09
TS23: medulla oblongata basal plate mantle layer Moderate Regionally restricted euxassay_008003_09
TS23: spinal cord mantle layer Moderate Regionally restricted euxassay_008003_09
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_008003_09
TS23: vestibulo-cochlear ganglion Moderate Regionally restricted euxassay_008003_09
TS23: dorsal root ganglion Moderate Regionally restricted euxassay_008003_09
Specimen euxassay_008003_10: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: diencephalon lateral wall mantle layer Moderate Regionally restricted euxassay_008003_10
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_008003_10
TS23: hypothalamus mantle layer Moderate Regionally restricted euxassay_008003_10
TS23: metencephalon rest of alar plate mantle layer Moderate Regionally restricted euxassay_008003_10
TS23: pons mantle layer Moderate Regionally restricted euxassay_008003_10
TS23: midbrain mantle layer Moderate Regionally restricted euxassay_008003_10
TS23: medulla oblongata basal plate mantle layer Moderate Regionally restricted euxassay_008003_10
TS23: spinal cord mantle layer Moderate Regionally restricted euxassay_008003_10
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_008003_10
TS23: dorsal root ganglion Moderate Regionally restricted euxassay_008003_10
Specimen euxassay_008003_11: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: diencephalon lateral wall mantle layer Moderate Regionally restricted euxassay_008003_11
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_008003_11
TS23: hypothalamus mantle layer Moderate Regionally restricted euxassay_008003_11
TS23: metencephalon rest of alar plate mantle layer Moderate Regionally restricted euxassay_008003_11
TS23: pons mantle layer Moderate Regionally restricted euxassay_008003_11
TS23: midbrain mantle layer Moderate Regionally restricted euxassay_008003_11
TS23: medulla oblongata basal plate mantle layer Moderate Regionally restricted euxassay_008003_11
TS23: spinal cord mantle layer Moderate Regionally restricted euxassay_008003_11
TS23: dorsal root ganglion Moderate Regionally restricted euxassay_008003_11
Specimen euxassay_008003_12: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: diencephalon lateral wall mantle layer Moderate Regionally restricted euxassay_008003_12
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_008003_12
TS23: hypothalamus mantle layer Moderate Regionally restricted euxassay_008003_12
TS23: metencephalon rest of alar plate mantle layer Moderate Regionally restricted euxassay_008003_12
TS23: pons mantle layer Moderate Regionally restricted euxassay_008003_12
TS23: midbrain mantle layer Moderate Regionally restricted euxassay_008003_12
TS23: medulla oblongata basal plate mantle layer Moderate Regionally restricted euxassay_008003_12
TS23: spinal cord mantle layer Moderate Regionally restricted euxassay_008003_12
TS23: dorsal root ganglion Moderate Regionally restricted euxassay_008003_12
TS23: olfactory epithelium Weak Regionally restricted euxassay_008003_12
Specimen euxassay_008003_13: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: diencephalon lateral wall mantle layer Moderate Regionally restricted euxassay_008003_13
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_008003_13
TS23: hypothalamus mantle layer Moderate Regionally restricted euxassay_008003_13
TS23: metencephalon rest of alar plate mantle layer Moderate Regionally restricted euxassay_008003_13
TS23: pons mantle layer Moderate Regionally restricted euxassay_008003_13
TS23: midbrain mantle layer Moderate Regionally restricted euxassay_008003_13
TS23: medulla oblongata basal plate mantle layer Moderate Regionally restricted euxassay_008003_13
TS23: spinal cord mantle layer Moderate Regionally restricted euxassay_008003_13
TS23: dorsal root ganglion Moderate Regionally restricted euxassay_008003_13
TS23: olfactory epithelium Weak Regionally restricted euxassay_008003_13
Specimen euxassay_008003_14: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: diencephalon lateral wall mantle layer Moderate Regionally restricted euxassay_008003_14
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_008003_14
TS23: hypothalamus mantle layer Moderate Regionally restricted euxassay_008003_14
TS23: metencephalon rest of alar plate mantle layer Moderate Regionally restricted euxassay_008003_14
TS23: pons mantle layer Moderate Regionally restricted euxassay_008003_14
TS23: midbrain mantle layer Moderate Regionally restricted euxassay_008003_14
TS23: medulla oblongata basal plate mantle layer Moderate Regionally restricted euxassay_008003_14
TS23: spinal cord mantle layer Moderate Regionally restricted euxassay_008003_14
TS23: olfactory epithelium Weak Regionally restricted euxassay_008003_14
Specimen euxassay_008003_15: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: diencephalon lateral wall mantle layer Moderate Regionally restricted euxassay_008003_15
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_008003_15
TS23: hypothalamus mantle layer Moderate Regionally restricted euxassay_008003_15
TS23: metencephalon rest of alar plate mantle layer Moderate Regionally restricted euxassay_008003_15
TS23: pons mantle layer Moderate Regionally restricted euxassay_008003_15
TS23: midbrain mantle layer Moderate Regionally restricted euxassay_008003_15
TS23: medulla oblongata basal plate mantle layer Moderate Regionally restricted euxassay_008003_15
TS23: spinal cord mantle layer Moderate Regionally restricted euxassay_008003_15
TS23: olfactory epithelium Weak Regionally restricted euxassay_008003_15
Specimen euxassay_008003_16: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: diencephalon lateral wall mantle layer Moderate Regionally restricted euxassay_008003_16
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_008003_16
TS23: hypothalamus mantle layer Moderate Regionally restricted euxassay_008003_16
TS23: metencephalon rest of alar plate mantle layer Moderate Regionally restricted euxassay_008003_16
TS23: pons mantle layer Moderate Regionally restricted euxassay_008003_16
TS23: midbrain mantle layer Moderate Regionally restricted euxassay_008003_16
TS23: medulla oblongata basal plate mantle layer Moderate Regionally restricted euxassay_008003_16
TS23: spinal cord mantle layer Weak Regionally restricted euxassay_008003_16
TS23: dorsal root ganglion Moderate Regionally restricted euxassay_008003_16
Specimen euxassay_008003_17: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: diencephalon lateral wall mantle layer Moderate Regionally restricted euxassay_008003_17
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_008003_17
TS23: hypothalamus mantle layer Moderate Regionally restricted euxassay_008003_17
TS23: metencephalon rest of alar plate mantle layer Moderate Regionally restricted euxassay_008003_17
TS23: pons mantle layer Moderate Regionally restricted euxassay_008003_17
TS23: midbrain mantle layer Moderate Regionally restricted euxassay_008003_17
TS23: medulla oblongata basal plate mantle layer Moderate Regionally restricted euxassay_008003_17
TS23: vagus ganglion Moderate Regionally restricted euxassay_008003_17
TS23: vestibulo-cochlear ganglion Moderate Regionally restricted euxassay_008003_17
TS23: dorsal root ganglion Moderate Regionally restricted euxassay_008003_17
TS23: olfactory epithelium Weak Regionally restricted euxassay_008003_17
Specimen euxassay_008003_18: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: hypothalamus mantle layer Moderate Regionally restricted euxassay_008003_18
TS23: diencephalon lateral wall mantle layer Moderate Regionally restricted euxassay_008003_18
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_008003_18
TS23: metencephalon rest of alar plate mantle layer Moderate Regionally restricted euxassay_008003_18
TS23: pons mantle layer Moderate Regionally restricted euxassay_008003_18
TS23: midbrain mantle layer Moderate Regionally restricted euxassay_008003_18
TS23: medulla oblongata basal plate mantle layer Moderate Regionally restricted euxassay_008003_18
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_008003_18
TS23: vestibulo-cochlear ganglion Moderate Regionally restricted euxassay_008003_18
TS23: glossopharyngeal ganglion Moderate Regionally restricted euxassay_008003_18
TS23: dorsal root ganglion Moderate Regionally restricted euxassay_008003_18
TS23: olfactory epithelium Weak Regionally restricted euxassay_008003_18
Specimen euxassay_008003_19: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_008003_19
TS23: metencephalon rest of alar plate mantle layer Moderate Regionally restricted euxassay_008003_19
TS23: pons mantle layer Moderate Regionally restricted euxassay_008003_19
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_008003_19
TS23: vestibulo-cochlear ganglion Moderate Regionally restricted euxassay_008003_19
TS23: glossopharyngeal ganglion Moderate Regionally restricted euxassay_008003_19
TS23: olfactory epithelium Weak Regionally restricted euxassay_008003_19
Specimen euxassay_008003_20: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_008003_20
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_008003_20
TS23: olfactory epithelium Weak Regionally restricted euxassay_008003_20
Specimen euxassay_008003_21: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_008003_21
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_008003_21
Specimen euxassay_008003_22: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_008003_22
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_008003_22
Specimen euxassay_008003_23: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_008003_23
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
05/28/2024
MGI 6.13 		The Jackson Laboratory