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Gene Expression Data
Assay Details
Assay
Reference: J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
Assay type: RNA in situ
MGI Accession ID: MGI:4825944
Gene symbol: Lmcd1
Gene name: LIM and cysteine-rich domains 1
Probe: MGC clone 29184
Probe preparation: Antisense labelled with digoxigenin RNA
Visualized with: Alkaline phosphatase
Assay notes: Cryosections of fresh frozen material were fixed in 4% paraformaldehyde for 20 min. before further processing. A tyramide-biotin/streptavidin amplification step was included in the in situ hybridization procedure.
Results
Specimen euxassay_002078_01: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: vertebral axis musculature Strong Regionally restricted euxassay_002078_01
TS23: diaphragm Strong Regionally restricted euxassay_002078_01
TS23: head mesenchyme Moderate Regionally restricted euxassay_002078_01
Specimen euxassay_002078_02: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: vertebral axis musculature Strong Regionally restricted euxassay_002078_02
TS23: diaphragm Strong Regionally restricted euxassay_002078_02
TS23: telencephalon ventricular layer Moderate Uniform euxassay_002078_02
TS23: rest of cerebellum ventricular layer Weak Regionally restricted euxassay_002078_02
TS23: head mesenchyme Moderate Regionally restricted euxassay_002078_02
Specimen euxassay_002078_03: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: vertebral axis musculature Strong Regionally restricted euxassay_002078_03
TS23: diaphragm Strong Regionally restricted euxassay_002078_03
TS23: telencephalon ventricular layer Moderate Uniform euxassay_002078_03
TS23: rest of cerebellum ventricular layer Weak Regionally restricted euxassay_002078_03
TS23: upper lip Strong Regionally restricted euxassay_002078_03
TS23: vibrissa Strong Regionally restricted euxassay_002078_03
TS23: head mesenchyme Moderate Regionally restricted euxassay_002078_03
Specimen euxassay_002078_04: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: vertebral axis musculature Strong Regionally restricted euxassay_002078_04
TS23: diaphragm Strong Regionally restricted euxassay_002078_04
TS23: telencephalon ventricular layer Moderate Uniform euxassay_002078_04
TS23: pons ventricular layer Weak Regionally restricted euxassay_002078_04
TS23: rest of cerebellum ventricular layer Weak Regionally restricted euxassay_002078_04
TS23: midbrain ventricular layer Moderate Regionally restricted euxassay_002078_04
TS23: oral epithelium Strong Regionally restricted euxassay_002078_04
TS23: upper lip Strong Regionally restricted euxassay_002078_04
TS23: lower lip Strong Regionally restricted euxassay_002078_04
TS23: vibrissa Strong Regionally restricted euxassay_002078_04
Specimen euxassay_002078_05: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: vertebral axis musculature Strong Regionally restricted euxassay_002078_05
TS23: diaphragm Strong Regionally restricted euxassay_002078_05
TS23: telencephalon ventricular layer Moderate Uniform euxassay_002078_05
TS23: pons ventricular layer Weak Regionally restricted euxassay_002078_05
TS23: rest of cerebellum ventricular layer Weak Regionally restricted euxassay_002078_05
TS23: medulla oblongata basal plate ventricular layer Weak Regionally restricted euxassay_002078_05
TS23: medulla oblongata alar plate ventricular layer Weak Regionally restricted euxassay_002078_05
TS23: midbrain ventricular layer Moderate Regionally restricted euxassay_002078_05
TS23: spinal cord ventricular layer Moderate Regionally restricted euxassay_002078_05
TS23: oral epithelium Strong Regionally restricted euxassay_002078_05
TS23: lower lip Strong Regionally restricted euxassay_002078_05
TS23: upper lip Strong Regionally restricted euxassay_002078_05
TS23: vibrissa Strong Regionally restricted euxassay_002078_05
Specimen euxassay_002078_06: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: vertebral axis musculature Strong Regionally restricted euxassay_002078_06
TS23: diaphragm Strong Regionally restricted euxassay_002078_06
TS23: telencephalon ventricular layer Moderate Uniform euxassay_002078_06
TS23: medulla oblongata alar plate ventricular layer Weak Regionally restricted euxassay_002078_06
TS23: medulla oblongata basal plate ventricular layer Weak Regionally restricted euxassay_002078_06
TS23: rest of cerebellum ventricular layer Weak Regionally restricted euxassay_002078_06
TS23: pons ventricular layer Weak Regionally restricted euxassay_002078_06
TS23: midbrain ventricular layer Moderate Regionally restricted euxassay_002078_06
TS23: spinal cord ventricular layer Moderate Regionally restricted euxassay_002078_06
TS23: upper lip Strong Regionally restricted euxassay_002078_06
TS23: lower lip Strong Regionally restricted euxassay_002078_06
TS23: vibrissa Strong Regionally restricted euxassay_002078_06
Specimen euxassay_002078_07: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: vertebral axis musculature Strong Regionally restricted euxassay_002078_07
TS23: telencephalon ventricular layer Moderate Uniform euxassay_002078_07
TS23: pons ventricular layer Weak Regionally restricted euxassay_002078_07
TS23: medulla oblongata basal plate ventricular layer Weak Regionally restricted euxassay_002078_07
TS23: medulla oblongata alar plate ventricular layer Weak Regionally restricted euxassay_002078_07
TS23: midbrain ventricular layer Moderate Regionally restricted euxassay_002078_07
TS23: spinal cord ventricular layer Moderate Regionally restricted euxassay_002078_07
TS23: ventral grey horn Moderate Regionally restricted euxassay_002078_07
TS23: oral epithelium Weak Regionally restricted euxassay_002078_07
TS23: lower lip Strong Regionally restricted euxassay_002078_07
TS23: upper lip Strong Regionally restricted euxassay_002078_07
TS23: turbinate bone primordium Strong Regionally restricted euxassay_002078_07
Specimen euxassay_002078_08: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: vertebral axis musculature Strong Regionally restricted euxassay_002078_08
TS23: telencephalon ventricular layer Moderate Uniform euxassay_002078_08
TS23: pons ventricular layer Weak Regionally restricted euxassay_002078_08
TS23: midbrain ventricular layer Moderate Regionally restricted euxassay_002078_08
TS23: ventral grey horn Moderate Regionally restricted euxassay_002078_08
TS23: oral epithelium Weak Regionally restricted euxassay_002078_08
TS23: upper lip Strong Regionally restricted euxassay_002078_08
TS23: lower lip Strong Regionally restricted euxassay_002078_08
TS23: turbinate bone primordium Strong Regionally restricted euxassay_002078_08
Specimen euxassay_002078_09: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: vertebral axis musculature Strong Regionally restricted euxassay_002078_09
TS23: telencephalon ventricular layer Moderate Uniform euxassay_002078_09
TS23: pons ventricular layer Weak Regionally restricted euxassay_002078_09
TS23: medulla oblongata alar plate ventricular layer Weak Regionally restricted euxassay_002078_09
TS23: medulla oblongata basal plate ventricular layer Weak Regionally restricted euxassay_002078_09
TS23: midbrain ventricular layer Moderate Regionally restricted euxassay_002078_09
TS23: diencephalon lateral wall ventricular layer Weak Regionally restricted euxassay_002078_09
TS23: hypothalamus ventricular layer Weak Regionally restricted euxassay_002078_09
TS23: tongue Moderate Regionally restricted euxassay_002078_09
TS23: lower lip Moderate Regionally restricted euxassay_002078_09
TS23: upper lip Moderate Regionally restricted euxassay_002078_09
TS23: turbinate bone primordium Strong Regionally restricted euxassay_002078_09
Specimen euxassay_002078_10: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: vertebral axis musculature Strong Regionally restricted euxassay_002078_10
TS23: diaphragm Moderate Regionally restricted euxassay_002078_10
TS23: olfactory cortex ventricular layer Moderate Uniform euxassay_002078_10
TS23: telencephalon ventricular layer Moderate Uniform euxassay_002078_10
TS23: medulla oblongata alar plate ventricular layer Weak Regionally restricted euxassay_002078_10
TS23: medulla oblongata basal plate ventricular layer Weak Regionally restricted euxassay_002078_10
TS23: pons ventricular layer Weak Regionally restricted euxassay_002078_10
TS23: midbrain ventricular layer Moderate Regionally restricted euxassay_002078_10
TS23: hypothalamus ventricular layer Weak Regionally restricted euxassay_002078_10
TS23: diencephalon lateral wall ventricular layer Weak Regionally restricted euxassay_002078_10
TS23: tongue Moderate Regionally restricted euxassay_002078_10
TS23: upper lip Moderate Regionally restricted euxassay_002078_10
Specimen euxassay_002078_11: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: vertebral axis musculature Strong Regionally restricted euxassay_002078_11
TS23: diaphragm Moderate Regionally restricted euxassay_002078_11
TS23: olfactory cortex ventricular layer Moderate Uniform euxassay_002078_11
TS23: telencephalon ventricular layer Moderate Uniform euxassay_002078_11
TS23: pons ventricular layer Weak Regionally restricted euxassay_002078_11
TS23: medulla oblongata basal plate ventricular layer Weak Regionally restricted euxassay_002078_11
TS23: medulla oblongata alar plate ventricular layer Weak Regionally restricted euxassay_002078_11
TS23: midbrain ventricular layer Moderate Regionally restricted euxassay_002078_11
TS23: hypothalamus ventricular layer Weak Regionally restricted euxassay_002078_11
TS23: diencephalon lateral wall ventricular layer Weak Regionally restricted euxassay_002078_11
TS23: tongue Moderate Regionally restricted euxassay_002078_11
Specimen euxassay_002078_12: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: vertebral axis musculature Strong Regionally restricted euxassay_002078_12
TS23: diaphragm Strong Regionally restricted euxassay_002078_12
TS23: telencephalon ventricular layer Moderate Uniform euxassay_002078_12
TS23: rest of cerebellum ventricular layer Weak Regionally restricted euxassay_002078_12
TS23: pons ventricular layer Weak Regionally restricted euxassay_002078_12
TS23: medulla oblongata basal plate ventricular layer Weak Regionally restricted euxassay_002078_12
TS23: medulla oblongata alar plate ventricular layer Weak Regionally restricted euxassay_002078_12
TS23: midbrain ventricular layer Moderate Regionally restricted euxassay_002078_12
TS23: hypothalamus ventricular layer Weak Regionally restricted euxassay_002078_12
TS23: diencephalon lateral wall ventricular layer Weak Regionally restricted euxassay_002078_12
TS23: tongue Moderate Regionally restricted euxassay_002078_12
Specimen euxassay_002078_13: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: vertebral axis musculature Strong Regionally restricted euxassay_002078_13
TS23: diaphragm Strong Regionally restricted euxassay_002078_13
TS23: telencephalon ventricular layer Moderate Uniform euxassay_002078_13
TS23: rest of cerebellum ventricular layer Weak Regionally restricted euxassay_002078_13
TS23: pons ventricular layer Weak Regionally restricted euxassay_002078_13
TS23: medulla oblongata alar plate ventricular layer Weak Regionally restricted euxassay_002078_13
TS23: medulla oblongata basal plate ventricular layer Weak Regionally restricted euxassay_002078_13
TS23: midbrain ventricular layer Moderate Regionally restricted euxassay_002078_13
TS23: hypothalamus ventricular layer Weak Regionally restricted euxassay_002078_13
TS23: tongue Moderate Regionally restricted euxassay_002078_13
Specimen euxassay_002078_14: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: vertebral axis musculature Strong Regionally restricted euxassay_002078_14
TS23: diaphragm Strong Regionally restricted euxassay_002078_14
TS23: olfactory cortex ventricular layer Moderate Uniform euxassay_002078_14
TS23: telencephalon ventricular layer Moderate Uniform euxassay_002078_14
TS23: rest of cerebellum ventricular layer Weak Regionally restricted euxassay_002078_14
TS23: midbrain ventricular layer Moderate Regionally restricted euxassay_002078_14
Specimen euxassay_002078_15: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: vertebral axis musculature Strong Regionally restricted euxassay_002078_15
TS23: diaphragm Strong Regionally restricted euxassay_002078_15
TS23: olfactory cortex ventricular layer Moderate Uniform euxassay_002078_15
TS23: telencephalon ventricular layer Moderate Uniform euxassay_002078_15
TS23: rest of cerebellum ventricular layer Weak Regionally restricted euxassay_002078_15
TS23: oral epithelium Weak Regionally restricted euxassay_002078_15
TS23: upper lip Moderate Regionally restricted euxassay_002078_15
TS23: lower lip Moderate Regionally restricted euxassay_002078_15
TS23: turbinate bone primordium Strong Regionally restricted euxassay_002078_15
Specimen euxassay_002078_16: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: vertebral axis musculature Strong Regionally restricted euxassay_002078_16
TS23: diaphragm Strong Regionally restricted euxassay_002078_16
TS23: olfactory cortex ventricular layer Moderate Uniform euxassay_002078_16
TS23: telencephalon ventricular layer Moderate Uniform euxassay_002078_16
TS23: rest of cerebellum ventricular layer Weak Regionally restricted euxassay_002078_16
TS23: oral epithelium Weak Regionally restricted euxassay_002078_16
TS23: upper lip Strong Regionally restricted euxassay_002078_16
TS23: lower lip Strong Regionally restricted euxassay_002078_16
TS23: turbinate bone primordium Strong Regionally restricted euxassay_002078_16
Specimen euxassay_002078_17: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: vertebral axis musculature Strong Regionally restricted euxassay_002078_17
TS23: diaphragm Strong Regionally restricted euxassay_002078_17
TS23: telencephalon ventricular layer Moderate Uniform euxassay_002078_17
TS23: rest of cerebellum ventricular layer Weak Regionally restricted euxassay_002078_17
TS23: oral epithelium Moderate Regionally restricted euxassay_002078_17
TS23: upper lip Strong Regionally restricted euxassay_002078_17
TS23: lower lip Strong Regionally restricted euxassay_002078_17
TS23: vibrissa Strong Regionally restricted euxassay_002078_17
TS23: turbinate bone primordium Strong Regionally restricted euxassay_002078_17
Specimen euxassay_002078_18: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: vertebral axis musculature Strong Regionally restricted euxassay_002078_18
TS23: diaphragm Strong Regionally restricted euxassay_002078_18
TS23: telencephalon ventricular layer Moderate Uniform euxassay_002078_18
TS23: oral epithelium Moderate Regionally restricted euxassay_002078_18
TS23: upper lip Strong Regionally restricted euxassay_002078_18
TS23: lower lip Strong Regionally restricted euxassay_002078_18
TS23: vibrissa Strong Regionally restricted euxassay_002078_18
TS23: turbinate bone primordium Strong Regionally restricted euxassay_002078_18
Specimen euxassay_002078_19: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: vertebral axis musculature Strong Regionally restricted euxassay_002078_19
TS23: diaphragm Strong Regionally restricted euxassay_002078_19
TS23: telencephalon ventricular layer Moderate Uniform euxassay_002078_19
TS23: oral epithelium Moderate Regionally restricted euxassay_002078_19
TS23: upper lip Strong Regionally restricted euxassay_002078_19
TS23: vibrissa Strong Regionally restricted euxassay_002078_19
TS23: head mesenchyme Moderate Regionally restricted euxassay_002078_19
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
05/07/2024
MGI 6.23 		The Jackson Laboratory