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Gene Expression Data
Assay Details
Assay
Reference: J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
Assay type: RNA in situ
MGI Accession ID: MGI:4825941
Gene symbol: Litaf
Gene name: LPS-induced TN factor
Probe: T31645
Probe preparation: Antisense labelled with digoxigenin RNA
Visualized with: Alkaline phosphatase
Assay notes: Cryosections of fresh frozen material were fixed in 4% paraformaldehyde for 20 min. before further processing. A tyramide-biotin/streptavidin amplification step was included in the in situ hybridization procedure.
Results
Specimen euxassay_013657_01: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon ventricular layer Moderate Uniform euxassay_013657_01
Specimen euxassay_013657_02: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon ventricular layer Moderate Uniform euxassay_013657_02
Specimen euxassay_013657_03: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon ventricular layer Moderate Uniform euxassay_013657_03
Specimen euxassay_013657_04: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon ventricular layer Moderate Uniform euxassay_013657_04
TS23: vibrissa Weak Regionally restricted euxassay_013657_04
TS23: inner ear vestibular component Moderate Regionally restricted euxassay_013657_04
Specimen euxassay_013657_05: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon ventricular layer Moderate Uniform euxassay_013657_05
TS23: upper jaw molar Weak Regionally restricted euxassay_013657_05
TS23: lower jaw molar Weak Regionally restricted euxassay_013657_05
TS23: vibrissa Weak Regionally restricted euxassay_013657_05
TS23: inner ear vestibular component Moderate Regionally restricted euxassay_013657_05
Specimen euxassay_013657_06: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon ventricular layer Moderate Uniform euxassay_013657_06
TS23: upper jaw molar Moderate Regionally restricted euxassay_013657_06
TS23: lower jaw molar Moderate Regionally restricted euxassay_013657_06
TS23: inner ear vestibular component Moderate Regionally restricted euxassay_013657_06
TS23: submandibular gland primordium Weak Regionally restricted euxassay_013657_06
Specimen euxassay_013657_07: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon ventricular layer Moderate Uniform euxassay_013657_07
TS23: pons ventricular layer Weak Regionally restricted euxassay_013657_07
TS23: inner ear vestibular component Moderate Regionally restricted euxassay_013657_07
TS23: submandibular gland primordium Weak Regionally restricted euxassay_013657_07
Specimen euxassay_013657_08: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon ventricular layer Moderate Uniform euxassay_013657_08
TS23: pons ventricular layer Weak Regionally restricted euxassay_013657_08
TS23: inner ear vestibular component Moderate Regionally restricted euxassay_013657_08
TS23: submandibular gland primordium Weak Regionally restricted euxassay_013657_08
Specimen euxassay_013657_09: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon ventricular layer Moderate Uniform euxassay_013657_09
TS23: olfactory cortex ventricular layer Moderate Uniform euxassay_013657_09
TS23: midbrain ventricular layer Weak Regionally restricted euxassay_013657_09
TS23: pons ventricular layer Weak Regionally restricted euxassay_013657_09
TS23: upper jaw incisor Weak Regionally restricted euxassay_013657_09
TS23: lower jaw incisor Weak Regionally restricted euxassay_013657_09
TS23: inner ear vestibular component Moderate Regionally restricted euxassay_013657_09
TS23: submandibular gland primordium Weak Regionally restricted euxassay_013657_09
Specimen euxassay_013657_10: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: olfactory cortex ventricular layer Moderate Uniform euxassay_013657_10
TS23: telencephalon ventricular layer Moderate Uniform euxassay_013657_10
TS23: midbrain ventricular layer Weak Regionally restricted euxassay_013657_10
TS23: upper jaw incisor Weak Regionally restricted euxassay_013657_10
TS23: lower jaw incisor Weak Regionally restricted euxassay_013657_10
TS23: axial skeleton tail region Moderate Regionally restricted euxassay_013657_10
Specimen euxassay_013657_11: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon ventricular layer Moderate Uniform euxassay_013657_11
TS23: diencephalon lateral wall ventricular layer Weak Regionally restricted euxassay_013657_11
TS23: midbrain ventricular layer Weak Regionally restricted euxassay_013657_11
TS23: upper jaw incisor Weak Regionally restricted euxassay_013657_11
TS23: lower jaw incisor Weak Regionally restricted euxassay_013657_11
TS23: axial skeleton tail region Moderate Regionally restricted euxassay_013657_11
Specimen euxassay_013657_12: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon ventricular layer Moderate Uniform euxassay_013657_12
TS23: diencephalon lateral wall ventricular layer Weak Regionally restricted euxassay_013657_12
TS23: midbrain ventricular layer Weak Regionally restricted euxassay_013657_12
TS23: axial skeleton tail region Moderate Regionally restricted euxassay_013657_12
TS23: urethra Weak Regionally restricted euxassay_013657_12 Originally this result was annotated to a male-specific term, but as the specimen was not sexed, it is likely the data annotator intended to use a non-gender specific term.
Specimen euxassay_013657_13: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: lower jaw incisor Weak Regionally restricted euxassay_013657_13
TS23: upper jaw incisor Weak Regionally restricted euxassay_013657_13
TS23: axial skeleton tail region Weak Regionally restricted euxassay_013657_13
TS23: urethra Weak Regionally restricted euxassay_013657_13 Originally this result was annotated to a male-specific term, but as the specimen was not sexed, it is likely the data annotator intended to use a non-gender specific term.
Specimen euxassay_013657_14: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon ventricular layer Moderate Uniform euxassay_013657_14
TS23: midbrain ventricular layer Weak Regionally restricted euxassay_013657_14
TS23: diencephalon lateral wall ventricular layer Weak Regionally restricted euxassay_013657_14
TS23: upper jaw incisor Moderate Regionally restricted euxassay_013657_14
TS23: lower jaw incisor Moderate Regionally restricted euxassay_013657_14
TS23: urethra Weak Regionally restricted euxassay_013657_14 Originally this result was annotated to a male-specific term, but as the specimen was not sexed, it is likely the data annotator intended to use a non-gender specific term.
Specimen euxassay_013657_15: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: olfactory cortex ventricular layer Moderate Uniform euxassay_013657_15
TS23: telencephalon ventricular layer Moderate Uniform euxassay_013657_15
TS23: midbrain ventricular layer Weak Regionally restricted euxassay_013657_15
TS23: pons ventricular layer Weak Regionally restricted euxassay_013657_15
Specimen euxassay_013657_16: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon ventricular layer Moderate Uniform euxassay_013657_16
TS23: olfactory cortex ventricular layer Moderate Uniform euxassay_013657_16
TS23: midbrain ventricular layer Weak Regionally restricted euxassay_013657_16
TS23: pons ventricular layer Weak Regionally restricted euxassay_013657_16
Specimen euxassay_013657_17: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon ventricular layer Moderate Uniform euxassay_013657_17
TS23: midbrain ventricular layer Weak Regionally restricted euxassay_013657_17
TS23: pons ventricular layer Weak Regionally restricted euxassay_013657_17
TS23: inner ear vestibular component Moderate Regionally restricted euxassay_013657_17
TS23: submandibular gland primordium Weak Regionally restricted euxassay_013657_17
Specimen euxassay_013657_18: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon ventricular layer Moderate Uniform euxassay_013657_18
TS23: midbrain ventricular layer Weak Regionally restricted euxassay_013657_18
TS23: pons ventricular layer Weak Regionally restricted euxassay_013657_18
TS23: upper jaw molar Moderate Regionally restricted euxassay_013657_18
TS23: lower jaw molar Moderate Regionally restricted euxassay_013657_18
TS23: inner ear vestibular component Moderate Regionally restricted euxassay_013657_18
TS23: submandibular gland primordium Weak Regionally restricted euxassay_013657_18
Specimen euxassay_013657_19: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon ventricular layer Moderate Uniform euxassay_013657_19
TS23: pons ventricular layer Weak Regionally restricted euxassay_013657_19
TS23: upper jaw molar Weak Regionally restricted euxassay_013657_19
TS23: lower jaw molar Weak Regionally restricted euxassay_013657_19
TS23: vibrissa Weak Regionally restricted euxassay_013657_19
TS23: inner ear vestibular component Moderate Regionally restricted euxassay_013657_19
TS23: submandibular gland primordium Weak Regionally restricted euxassay_013657_19
Specimen euxassay_013657_20: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon ventricular layer Moderate Uniform euxassay_013657_20
TS23: vibrissa Weak Regionally restricted euxassay_013657_20
TS23: inner ear vestibular component Moderate Regionally restricted euxassay_013657_20
Specimen euxassay_013657_21: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon ventricular layer Moderate Uniform euxassay_013657_21
TS23: inner ear vestibular component Moderate Regionally restricted euxassay_013657_21
Specimen euxassay_013657_22: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon ventricular layer Moderate Uniform euxassay_013657_22
Specimen euxassay_013657_23: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon ventricular layer Moderate Uniform euxassay_013657_23
Specimen euxassay_013657_24: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon ventricular layer Moderate Uniform euxassay_013657_24
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
05/07/2024
MGI 6.23 		The Jackson Laboratory