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Gene Expression Data
Assay Details
Assay
Reference: J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
Assay type: RNA in situ
MGI Accession ID: MGI:4825913
Gene symbol: Lgi3
Gene name: leucine-rich repeat LGI family, member 3
Probe: MGC clone 66716
Probe preparation: Antisense labelled with digoxigenin RNA
Visualized with: Alkaline phosphatase
Assay notes: Cryosections of fresh frozen material were fixed in 4% paraformaldehyde for 20 min. before further processing. A tyramide-biotin/streptavidin amplification step was included in the in situ hybridization procedure.
Results
Specimen euxassay_007015_02: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon mantle layer Moderate Spotted euxassay_007015_02
TS23: hand Moderate Regionally restricted euxassay_007015_02
Specimen euxassay_007015_03: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon mantle layer Moderate Spotted euxassay_007015_03
TS23: stomach mesentery Moderate Regionally restricted euxassay_007015_03
TS23: foot Moderate Regionally restricted euxassay_007015_03
TS23: hand Moderate Regionally restricted euxassay_007015_03
Specimen euxassay_007015_04: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: left lung Strong Regionally restricted euxassay_007015_04
TS23: telencephalon mantle layer Moderate Spotted euxassay_007015_04
TS23: trigeminal ganglion Moderate Spotted euxassay_007015_04
TS23: stomach mesentery Moderate Regionally restricted euxassay_007015_04
TS23: hand Moderate Regionally restricted euxassay_007015_04
TS23: foot Moderate Regionally restricted euxassay_007015_04
Specimen euxassay_007015_05: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: left lung Strong Regionally restricted euxassay_007015_05
TS23: pons mantle layer Moderate Spotted euxassay_007015_05
TS23: telencephalon mantle layer Moderate Spotted euxassay_007015_05
TS23: trigeminal ganglion Moderate Spotted euxassay_007015_05
TS23: stomach mesentery Moderate Regionally restricted euxassay_007015_05
TS23: hand Moderate Regionally restricted euxassay_007015_05
TS23: foot Moderate Regionally restricted euxassay_007015_05
Specimen euxassay_007015_06: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: left lung Strong Regionally restricted euxassay_007015_06
TS23: pons mantle layer Moderate Spotted euxassay_007015_06
TS23: trigeminal ganglion Moderate Spotted euxassay_007015_06
TS23: stomach mesentery Moderate Regionally restricted euxassay_007015_06
TS23: urogenital mesentery Moderate Regionally restricted euxassay_007015_06
TS23: hand Moderate Regionally restricted euxassay_007015_06
TS23: foot Moderate Regionally restricted euxassay_007015_06
Specimen euxassay_007015_07: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: left lung Strong Regionally restricted euxassay_007015_07
TS23: medulla oblongata basal plate mantle layer Moderate Spotted euxassay_007015_07
TS23: pons mantle layer Moderate Spotted euxassay_007015_07
TS23: trigeminal ganglion Moderate Spotted euxassay_007015_07
TS23: stomach mesentery Moderate Regionally restricted euxassay_007015_07
TS23: urogenital mesentery Moderate Regionally restricted euxassay_007015_07
Specimen euxassay_007015_08: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: left lung Strong Regionally restricted euxassay_007015_08
TS23: pons mantle layer Moderate Spotted euxassay_007015_08
TS23: medulla oblongata basal plate mantle layer Moderate Spotted euxassay_007015_08
TS23: trigeminal ganglion Moderate Spotted euxassay_007015_08
TS23: stomach mesentery Moderate Regionally restricted euxassay_007015_08
TS23: urogenital mesentery Moderate Regionally restricted euxassay_007015_08
Specimen euxassay_007015_09: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: left lung Strong Regionally restricted euxassay_007015_09
TS23: medulla oblongata basal plate mantle layer Moderate Spotted euxassay_007015_09
TS23: pons mantle layer Moderate Spotted euxassay_007015_09
TS23: trigeminal ganglion Moderate Spotted euxassay_007015_09
TS23: stomach mesentery Moderate Regionally restricted euxassay_007015_09
TS23: urogenital mesentery Moderate Regionally restricted euxassay_007015_09
Specimen euxassay_007015_10: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: left lung Strong Regionally restricted euxassay_007015_10
TS23: pons mantle layer Moderate Spotted euxassay_007015_10
TS23: medulla oblongata basal plate mantle layer Moderate Spotted euxassay_007015_10
TS23: trigeminal ganglion Moderate Spotted euxassay_007015_10
TS23: stomach mesentery Moderate Regionally restricted euxassay_007015_10
TS23: urogenital mesentery Moderate Regionally restricted euxassay_007015_10
Specimen euxassay_007015_11: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: left lung Strong Regionally restricted euxassay_007015_11
TS23: pons mantle layer Moderate Spotted euxassay_007015_11
TS23: medulla oblongata basal plate mantle layer Moderate Spotted euxassay_007015_11
TS23: basal columns Strong Regionally restricted euxassay_007015_11
TS23: diencephalon lateral wall mantle layer Moderate Spotted euxassay_007015_11
TS23: stomach mesentery Moderate Regionally restricted euxassay_007015_11
Specimen euxassay_007015_12: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: left lung Strong Regionally restricted euxassay_007015_12
TS23: pons mantle layer Moderate Spotted euxassay_007015_12
TS23: medulla oblongata basal plate mantle layer Moderate Spotted euxassay_007015_12
TS23: basal columns Strong Regionally restricted euxassay_007015_12
TS23: midbrain ventricular layer Strong Regionally restricted euxassay_007015_12
TS23: stomach mesentery Moderate Regionally restricted euxassay_007015_12
Specimen euxassay_007015_13: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: left lung Strong Regionally restricted euxassay_007015_13
TS23: pons ventricular layer Strong Regionally restricted euxassay_007015_13
TS23: medulla oblongata basal plate ventricular layer Strong Regionally restricted euxassay_007015_13
TS23: basal columns Strong Regionally restricted euxassay_007015_13
TS23: midbrain ventricular layer Strong Regionally restricted euxassay_007015_13
Specimen euxassay_007015_14: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: left lung Strong Regionally restricted euxassay_007015_14
TS23: pons mantle layer Strong Regionally restricted euxassay_007015_14
TS23: pons ventricular layer Strong Regionally restricted euxassay_007015_14
TS23: medulla oblongata basal plate mantle layer Strong Regionally restricted euxassay_007015_14
TS23: basal columns Strong Regionally restricted euxassay_007015_14
TS23: midbrain ventricular layer Strong Regionally restricted euxassay_007015_14
Specimen euxassay_007015_15: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: left lung Strong Regionally restricted euxassay_007015_15
TS23: pons mantle layer Strong Spotted euxassay_007015_15
TS23: medulla oblongata basal plate mantle layer Strong Spotted euxassay_007015_15
TS23: basal columns Strong Regionally restricted euxassay_007015_15
TS23: diencephalon lateral wall mantle layer Moderate Spotted euxassay_007015_15
Specimen euxassay_007015_16: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: right lung Strong Regionally restricted euxassay_007015_16
TS23: medulla oblongata basal plate mantle layer Strong Spotted euxassay_007015_16
TS23: pons mantle layer Strong Spotted euxassay_007015_16
TS23: basal columns Strong Regionally restricted euxassay_007015_16
TS23: diencephalon lateral wall mantle layer Moderate Spotted euxassay_007015_16
TS23: midgut mesentery Moderate Regionally restricted euxassay_007015_16
Specimen euxassay_007015_17: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: right lung Strong Regionally restricted euxassay_007015_17
TS23: medulla oblongata basal plate mantle layer Strong Spotted euxassay_007015_17
TS23: pons mantle layer Strong Spotted euxassay_007015_17
TS23: basal columns Strong Regionally restricted euxassay_007015_17
TS23: midgut mesentery Moderate Regionally restricted euxassay_007015_17
Specimen euxassay_007015_18: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: right lung Strong Regionally restricted euxassay_007015_18
TS23: medulla oblongata basal plate mantle layer Moderate Regionally restricted euxassay_007015_18
TS23: pons mantle layer Moderate Regionally restricted euxassay_007015_18
TS23: basal columns Strong Regionally restricted euxassay_007015_18
TS23: midgut mesentery Moderate Regionally restricted euxassay_007015_18
Specimen euxassay_007015_19: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: right lung Strong Regionally restricted euxassay_007015_19
TS23: medulla oblongata basal plate mantle layer Moderate Regionally restricted euxassay_007015_19
TS23: pons mantle layer Moderate Regionally restricted euxassay_007015_19
TS23: basal columns Strong Regionally restricted euxassay_007015_19
TS23: trigeminal ganglion Moderate Spotted euxassay_007015_19
TS23: midgut mesentery Moderate Regionally restricted euxassay_007015_19
Specimen euxassay_007015_20: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: right lung Strong Regionally restricted euxassay_007015_20
TS23: medulla oblongata basal plate mantle layer Moderate Regionally restricted euxassay_007015_20
TS23: pons mantle layer Moderate Regionally restricted euxassay_007015_20
TS23: trigeminal ganglion Moderate Spotted euxassay_007015_20
TS23: midgut mesentery Moderate Regionally restricted euxassay_007015_20
Specimen euxassay_007015_21: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: right lung Strong Regionally restricted euxassay_007015_21
TS23: trigeminal ganglion Moderate Spotted euxassay_007015_21
TS23: midgut mesentery Moderate Regionally restricted euxassay_007015_21
Specimen euxassay_007015_22: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: right lung Strong Regionally restricted euxassay_007015_22
TS23: trigeminal ganglion Moderate Spotted euxassay_007015_22
Specimen euxassay_007015_23: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: right lung Strong Regionally restricted euxassay_007015_23
TS23: trigeminal ganglion Moderate Spotted euxassay_007015_23
TS23: urogenital mesentery Weak Regionally restricted euxassay_007015_23
Specimen euxassay_007015_24: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: right lung Strong Regionally restricted euxassay_007015_24
TS23: telencephalon mantle layer Moderate Spotted euxassay_007015_24
TS23: trigeminal ganglion Moderate Spotted euxassay_007015_24
TS23: urogenital mesentery Moderate Regionally restricted euxassay_007015_24
TS23: foot Moderate Regionally restricted euxassay_007015_24
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
05/21/2024
MGI 6.23 		The Jackson Laboratory