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Gene Expression Data
Assay Details
Assay
Reference: J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
Assay type: RNA in situ
MGI Accession ID: MGI:4825642
Gene symbol: Itga4
Gene name: integrin alpha 4
Probe: MGC clone 76683
Probe preparation: Antisense labelled with digoxigenin RNA
Visualized with: Alkaline phosphatase
Assay notes: Cryosections of fresh frozen material were fixed in 4% paraformaldehyde for 20 min. before further processing. A tyramide-biotin/streptavidin amplification step was included in the in situ hybridization procedure.
Results
Specimen euxassay_006687_03: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: left lung Weak Regionally restricted euxassay_006687_03
TS23: pons mantle layer Weak Regionally restricted euxassay_006687_03
Specimen euxassay_006687_04: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: left lung Weak Regionally restricted euxassay_006687_04
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_006687_04
TS23: amygdala Present euxassay_006687_04
TS23: pons mantle layer Weak Regionally restricted euxassay_006687_04
Specimen euxassay_006687_05: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: left lung Weak Regionally restricted euxassay_006687_05
TS23: telencephalon mantle layer Weak Regionally restricted euxassay_006687_05
TS23: amygdala Present euxassay_006687_05
TS23: diencephalon lateral wall mantle layer Weak Regionally restricted euxassay_006687_05
TS23: pons mantle layer Weak Regionally restricted euxassay_006687_05
TS23: midbrain mantle layer Weak Regionally restricted euxassay_006687_05
Specimen euxassay_006687_06: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: left lung Weak Regionally restricted euxassay_006687_06
TS23: heart ventricle Moderate Regionally restricted euxassay_006687_06
TS23: diencephalon lateral wall mantle layer Weak Regionally restricted euxassay_006687_06
Specimen euxassay_006687_07: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: left lung Moderate Regionally restricted euxassay_006687_07
TS23: heart ventricle Moderate Regionally restricted euxassay_006687_07
TS23: ventral grey horn Weak Regionally restricted euxassay_006687_07
TS23: diencephalon lateral wall mantle layer Weak Regionally restricted euxassay_006687_07
TS23: midbrain mantle layer Weak Regionally restricted euxassay_006687_07
Specimen euxassay_006687_08: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: left lung Moderate Regionally restricted euxassay_006687_08
TS23: heart ventricle Weak Regionally restricted euxassay_006687_08
TS23: ventral grey horn Weak Regionally restricted euxassay_006687_08
TS23: diencephalon lateral wall mantle layer Weak Regionally restricted euxassay_006687_08
TS23: midbrain mantle layer Weak Regionally restricted euxassay_006687_08
Specimen euxassay_006687_09: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: left lung Moderate Regionally restricted euxassay_006687_09
TS23: heart ventricle Weak Regionally restricted euxassay_006687_09
TS23: ventral grey horn Weak Regionally restricted euxassay_006687_09
TS23: diencephalon lateral wall mantle layer Weak Regionally restricted euxassay_006687_09
TS23: adenohypophysis Weak Regionally restricted euxassay_006687_09
Specimen euxassay_006687_10: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: left lung Moderate Regionally restricted euxassay_006687_10
TS23: heart ventricle Weak Regionally restricted euxassay_006687_10
TS23: ventral grey horn Weak Regionally restricted euxassay_006687_10
TS23: adenohypophysis Weak Regionally restricted euxassay_006687_10
Specimen euxassay_006687_11: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: heart ventricle Weak Regionally restricted euxassay_006687_11
TS23: ventral grey horn Weak Regionally restricted euxassay_006687_11
TS23: diencephalon lateral wall mantle layer Weak Regionally restricted euxassay_006687_11
TS23: adenohypophysis Weak Regionally restricted euxassay_006687_11
Specimen euxassay_006687_12: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: right lung Moderate Regionally restricted euxassay_006687_12
TS23: heart ventricle Moderate Regionally restricted euxassay_006687_12
TS23: bladder fundus Weak Regionally restricted euxassay_006687_12
TS23: ventral grey horn Weak Regionally restricted euxassay_006687_12
TS23: diencephalon lateral wall mantle layer Weak Regionally restricted euxassay_006687_12
TS23: adenohypophysis Weak Regionally restricted euxassay_006687_12
Specimen euxassay_006687_13: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: right lung Moderate Regionally restricted euxassay_006687_13
TS23: heart ventricle Moderate Regionally restricted euxassay_006687_13
TS23: bladder fundus Weak Regionally restricted euxassay_006687_13
TS23: urethra Weak Regionally restricted euxassay_006687_13 Originally this result was annotated to a male-specific term, but as the specimen was not sexed, it is likely the data annotator intended to use a non-gender specific term.
TS23: ventral grey horn Weak Regionally restricted euxassay_006687_13
TS23: diencephalon lateral wall mantle layer Weak Regionally restricted euxassay_006687_13
TS23: midbrain mantle layer Weak Regionally restricted euxassay_006687_13
TS23: adenohypophysis Weak Regionally restricted euxassay_006687_13
Specimen euxassay_006687_14: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: right lung Moderate Regionally restricted euxassay_006687_14
TS23: heart ventricle Moderate Regionally restricted euxassay_006687_14
TS23: bladder fundus Weak Regionally restricted euxassay_006687_14
TS23: urethra Weak Regionally restricted euxassay_006687_14 Originally this result was annotated to a male-specific term, but as the specimen was not sexed, it is likely the data annotator intended to use a non-gender specific term.
TS23: ventral grey horn Moderate Regionally restricted euxassay_006687_14
TS23: diencephalon lateral wall mantle layer Weak Regionally restricted euxassay_006687_14
TS23: midbrain mantle layer Weak Regionally restricted euxassay_006687_14
TS23: pons mantle layer Weak Regionally restricted euxassay_006687_14
Specimen euxassay_006687_15: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: right lung Weak Regionally restricted euxassay_006687_15
TS23: heart ventricle Weak Regionally restricted euxassay_006687_15
TS23: urethra Weak Regionally restricted euxassay_006687_15 Originally this result was annotated to a male-specific term, but as the specimen was not sexed, it is likely the data annotator intended to use a non-gender specific term.
TS23: diencephalon lateral wall mantle layer Weak Regionally restricted euxassay_006687_15
Specimen euxassay_006687_16: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: right lung Weak Regionally restricted euxassay_006687_16
TS23: heart ventricle Weak Regionally restricted euxassay_006687_16
TS23: diencephalon lateral wall mantle layer Weak Regionally restricted euxassay_006687_16
TS23: pons mantle layer Weak Regionally restricted euxassay_006687_16
Specimen euxassay_006687_17: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: right lung Weak Regionally restricted euxassay_006687_17
TS23: heart ventricle Weak Regionally restricted euxassay_006687_17
Specimen euxassay_006687_18: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: right lung Weak Regionally restricted euxassay_006687_18
TS23: heart ventricle Weak Regionally restricted euxassay_006687_18
TS23: telencephalon mantle layer Weak Regionally restricted euxassay_006687_18
TS23: amygdala Present euxassay_006687_18
Specimen euxassay_006687_19: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: right lung Weak Regionally restricted euxassay_006687_19
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_006687_19
TS23: amygdala Present euxassay_006687_19
Specimen euxassay_006687_20: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: right lung Weak Regionally restricted euxassay_006687_20
Specimen euxassay_006687_21: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: right lung Weak Regionally restricted euxassay_006687_21
Specimen euxassay_006687_22: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: right lung Weak Regionally restricted euxassay_006687_22
Specimen euxassay_006687_23: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: right lung Weak Regionally restricted euxassay_006687_23
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
05/14/2024
MGI 6.23 		The Jackson Laboratory