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Gene Expression Data
Assay Details
Assay
Reference: J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
Assay type: RNA in situ
MGI Accession ID: MGI:4825615
Gene symbol: Iqsec1
Gene name: IQ motif and Sec7 domain 1
Probe: T39550
Probe preparation: Antisense labelled with digoxigenin RNA
Visualized with: Alkaline phosphatase
Assay notes: Cryosections of fresh frozen material were fixed in 4% paraformaldehyde for 20 min. before further processing. A tyramide-biotin/streptavidin amplification step was included in the in situ hybridization procedure.
Results
Specimen euxassay_014196_02: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_014196_02
Specimen euxassay_014196_03: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_014196_03
TS23: rest of cerebellum ventricular layer Moderate Regionally restricted euxassay_014196_03
TS23: pons ventricular layer Moderate Regionally restricted euxassay_014196_03
TS23: medulla oblongata basal plate ventricular layer Moderate Regionally restricted euxassay_014196_03
TS23: medulla oblongata alar plate ventricular layer Moderate Regionally restricted euxassay_014196_03
Specimen euxassay_014196_04: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_014196_04
TS23: pons ventricular layer Moderate Regionally restricted euxassay_014196_04
TS23: rest of cerebellum ventricular layer Moderate Regionally restricted euxassay_014196_04
TS23: medulla oblongata basal plate ventricular layer Moderate Regionally restricted euxassay_014196_04
TS23: medulla oblongata alar plate ventricular layer Moderate Regionally restricted euxassay_014196_04
TS23: turbinate bone primordium Moderate Regionally restricted euxassay_014196_04
TS23: orbito-sphenoid Moderate Regionally restricted euxassay_014196_04
Specimen euxassay_014196_05: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon mantle layer Strong Regionally restricted euxassay_014196_05
TS23: vestibulo-cochlear ganglion Moderate Regionally restricted euxassay_014196_05
TS23: turbinate bone primordium Moderate Regionally restricted euxassay_014196_05
TS23: orbito-sphenoid Moderate Regionally restricted euxassay_014196_05
Specimen euxassay_014196_06: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon mantle layer Strong Regionally restricted euxassay_014196_06
TS23: medulla oblongata alar plate ventricular layer Moderate Regionally restricted euxassay_014196_06
TS23: medulla oblongata basal plate ventricular layer Moderate Regionally restricted euxassay_014196_06
TS23: rest of cerebellum ventricular layer Moderate Regionally restricted euxassay_014196_06
TS23: pons ventricular layer Moderate Regionally restricted euxassay_014196_06
TS23: turbinate bone primordium Moderate Regionally restricted euxassay_014196_06
Specimen euxassay_014196_07: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon mantle layer Strong Regionally restricted euxassay_014196_07
TS23: midbrain ventricular layer Moderate Regionally restricted euxassay_014196_07
TS23: medulla oblongata alar plate ventricular layer Moderate Regionally restricted euxassay_014196_07
TS23: medulla oblongata basal plate ventricular layer Moderate Regionally restricted euxassay_014196_07
TS23: rest of cerebellum ventricular layer Moderate Regionally restricted euxassay_014196_07
TS23: pons ventricular layer Moderate Regionally restricted euxassay_014196_07
TS23: naris Moderate Regionally restricted euxassay_014196_07
TS23: turbinate bone primordium Moderate Regionally restricted euxassay_014196_07
Specimen euxassay_014196_08: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon mantle layer Strong Regionally restricted euxassay_014196_08
TS23: midbrain ventricular layer Moderate Regionally restricted euxassay_014196_08
TS23: medulla oblongata alar plate ventricular layer Moderate Regionally restricted euxassay_014196_08
TS23: medulla oblongata basal plate ventricular layer Moderate Regionally restricted euxassay_014196_08
TS23: rest of cerebellum ventricular layer Moderate Regionally restricted euxassay_014196_08
TS23: pons ventricular layer Moderate Regionally restricted euxassay_014196_08
TS23: turbinate bone primordium Moderate Regionally restricted euxassay_014196_08
TS23: naris Moderate Regionally restricted euxassay_014196_08
TS23: otic capsule Moderate Regionally restricted euxassay_014196_08
Specimen euxassay_014196_09: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon mantle layer Strong Regionally restricted euxassay_014196_09
TS23: midbrain ventricular layer Moderate Regionally restricted euxassay_014196_09
TS23: medulla oblongata alar plate ventricular layer Moderate Regionally restricted euxassay_014196_09
TS23: medulla oblongata basal plate ventricular layer Moderate Regionally restricted euxassay_014196_09
TS23: rest of cerebellum ventricular layer Moderate Regionally restricted euxassay_014196_09
TS23: pons ventricular layer Moderate Regionally restricted euxassay_014196_09
TS23: naris Moderate Regionally restricted euxassay_014196_09
TS23: turbinate bone primordium Moderate Regionally restricted euxassay_014196_09
Specimen euxassay_014196_10: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: midbrain ventricular layer Moderate Regionally restricted euxassay_014196_10
TS23: diencephalon lateral wall ventricular layer Moderate Regionally restricted euxassay_014196_10
TS23: medulla oblongata alar plate ventricular layer Moderate Regionally restricted euxassay_014196_10
TS23: medulla oblongata basal plate ventricular layer Moderate Regionally restricted euxassay_014196_10
TS23: rest of cerebellum ventricular layer Moderate Regionally restricted euxassay_014196_10
TS23: pons ventricular layer Moderate Regionally restricted euxassay_014196_10
TS23: turbinate bone primordium Moderate Regionally restricted euxassay_014196_10
TS23: naris Moderate Regionally restricted euxassay_014196_10
Specimen euxassay_014196_11: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: midbrain ventricular layer Moderate Regionally restricted euxassay_014196_11
TS23: diencephalon lateral wall ventricular layer Moderate Regionally restricted euxassay_014196_11
TS23: medulla oblongata alar plate ventricular layer Moderate Regionally restricted euxassay_014196_11
TS23: medulla oblongata basal plate ventricular layer Moderate Regionally restricted euxassay_014196_11
TS23: rest of cerebellum ventricular layer Moderate Regionally restricted euxassay_014196_11
TS23: pons ventricular layer Moderate Regionally restricted euxassay_014196_11
TS23: turbinate bone primordium Moderate Regionally restricted euxassay_014196_11
TS23: naris Moderate Regionally restricted euxassay_014196_11
Specimen euxassay_014196_12: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon mantle layer Strong Regionally restricted euxassay_014196_12
TS23: midbrain ventricular layer Moderate Regionally restricted euxassay_014196_12
TS23: diencephalon lateral wall ventricular layer Moderate Regionally restricted euxassay_014196_12
TS23: medulla oblongata alar plate ventricular layer Moderate Regionally restricted euxassay_014196_12
TS23: medulla oblongata basal plate ventricular layer Moderate Regionally restricted euxassay_014196_12
TS23: rest of cerebellum ventricular layer Moderate Regionally restricted euxassay_014196_12
TS23: pons ventricular layer Moderate Regionally restricted euxassay_014196_12
TS23: turbinate bone primordium Moderate Regionally restricted euxassay_014196_12
TS23: naris Moderate Regionally restricted euxassay_014196_12
Specimen euxassay_014196_13: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon mantle layer Strong Regionally restricted euxassay_014196_13
TS23: midbrain ventricular layer Moderate Regionally restricted euxassay_014196_13
TS23: medulla oblongata alar plate ventricular layer Moderate Regionally restricted euxassay_014196_13
TS23: medulla oblongata basal plate ventricular layer Moderate Regionally restricted euxassay_014196_13
TS23: rest of cerebellum ventricular layer Moderate Regionally restricted euxassay_014196_13
TS23: pons ventricular layer Moderate Regionally restricted euxassay_014196_13
TS23: turbinate bone primordium Moderate Regionally restricted euxassay_014196_13
Specimen euxassay_014196_14: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon mantle layer Strong Regionally restricted euxassay_014196_14
TS23: midbrain ventricular layer Moderate Regionally restricted euxassay_014196_14
TS23: medulla oblongata alar plate ventricular layer Moderate Regionally restricted euxassay_014196_14
TS23: medulla oblongata basal plate ventricular layer Moderate Regionally restricted euxassay_014196_14
TS23: rest of cerebellum ventricular layer Moderate Regionally restricted euxassay_014196_14
TS23: pons ventricular layer Moderate Regionally restricted euxassay_014196_14
TS23: turbinate bone primordium Moderate Regionally restricted euxassay_014196_14
TS23: otic capsule Moderate Regionally restricted euxassay_014196_14
Specimen euxassay_014196_15: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon mantle layer Strong Regionally restricted euxassay_014196_15
TS23: midbrain ventricular layer Moderate Regionally restricted euxassay_014196_15
TS23: medulla oblongata alar plate ventricular layer Moderate Regionally restricted euxassay_014196_15
TS23: medulla oblongata basal plate ventricular layer Moderate Regionally restricted euxassay_014196_15
TS23: rest of cerebellum ventricular layer Moderate Regionally restricted euxassay_014196_15
TS23: pons ventricular layer Moderate Regionally restricted euxassay_014196_15
TS23: turbinate bone primordium Moderate Regionally restricted euxassay_014196_15
TS23: orbito-sphenoid Moderate Regionally restricted euxassay_014196_15
Specimen euxassay_014196_16: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon mantle layer Strong Regionally restricted euxassay_014196_16
TS23: midbrain ventricular layer Moderate Regionally restricted euxassay_014196_16
TS23: medulla oblongata alar plate ventricular layer Moderate Regionally restricted euxassay_014196_16
TS23: medulla oblongata basal plate ventricular layer Moderate Regionally restricted euxassay_014196_16
TS23: rest of cerebellum ventricular layer Moderate Regionally restricted euxassay_014196_16
TS23: pons ventricular layer Moderate Regionally restricted euxassay_014196_16
TS23: turbinate bone primordium Moderate Regionally restricted euxassay_014196_16
TS23: orbito-sphenoid Moderate Regionally restricted euxassay_014196_16
Specimen euxassay_014196_17: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_014196_17
TS23: medulla oblongata alar plate ventricular layer Moderate Regionally restricted euxassay_014196_17
TS23: medulla oblongata basal plate ventricular layer Moderate Regionally restricted euxassay_014196_17
TS23: rest of cerebellum ventricular layer Moderate Regionally restricted euxassay_014196_17
TS23: pons ventricular layer Moderate Regionally restricted euxassay_014196_17
TS23: vestibulo-cochlear ganglion Moderate Regionally restricted euxassay_014196_17
TS23: orbito-sphenoid Moderate Regionally restricted euxassay_014196_17
Specimen euxassay_014196_18: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_014196_18
TS23: medulla oblongata alar plate ventricular layer Moderate Regionally restricted euxassay_014196_18
TS23: medulla oblongata basal plate ventricular layer Moderate Regionally restricted euxassay_014196_18
TS23: rest of cerebellum ventricular layer Moderate Regionally restricted euxassay_014196_18
TS23: pons ventricular layer Moderate Regionally restricted euxassay_014196_18
Specimen euxassay_014196_19: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_014196_19
TS23: medulla oblongata alar plate ventricular layer Moderate Regionally restricted euxassay_014196_19
TS23: medulla oblongata basal plate ventricular layer Moderate Regionally restricted euxassay_014196_19
TS23: rest of cerebellum ventricular layer Moderate Regionally restricted euxassay_014196_19
TS23: pons ventricular layer Moderate Regionally restricted euxassay_014196_19
Specimen euxassay_014196_20: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_014196_20
TS23: rest of cerebellum ventricular layer Moderate Regionally restricted euxassay_014196_20
TS23: pons ventricular layer Moderate Regionally restricted euxassay_014196_20
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
05/21/2024
MGI 6.23 		The Jackson Laboratory