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Gene Expression Data
Assay Details
Assay
Reference: J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
Assay type: RNA in situ
MGI Accession ID: MGI:4825497
Gene symbol: Ica1
Gene name: islet cell autoantigen 1
Probe: MGC clone 5919
Probe preparation: Antisense labelled with digoxigenin RNA
Visualized with: Alkaline phosphatase
Assay notes: Cryosections of fresh frozen material were fixed in 4% paraformaldehyde for 20 min. before further processing. A tyramide-biotin/streptavidin amplification step was included in the in situ hybridization procedure.
Results
Specimen euxassay_014251_01: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: neural retina Weak Regionally restricted euxassay_014251_01
TS23: telencephalon mantle layer Weak Regionally restricted euxassay_014251_01
Specimen euxassay_014251_02: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: neural retina Weak Regionally restricted euxassay_014251_02
TS23: telencephalon mantle layer Weak Regionally restricted euxassay_014251_02
Specimen euxassay_014251_03: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_014251_03
TS23: facial ganglion Moderate Regionally restricted euxassay_014251_03
TS23: telencephalon mantle layer Weak Regionally restricted euxassay_014251_03
Specimen euxassay_014251_04: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_014251_04
TS23: facial ganglion Moderate Regionally restricted euxassay_014251_04
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_014251_04
TS23: rest of cerebellum mantle layer Weak Regionally restricted euxassay_014251_04
Specimen euxassay_014251_05: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_014251_05
TS23: facial ganglion Moderate Regionally restricted euxassay_014251_05
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_014251_05
TS23: rest of cerebellum mantle layer Weak Regionally restricted euxassay_014251_05
TS23: submandibular gland primordium Weak Regionally restricted euxassay_014251_05
Specimen euxassay_014251_06: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: glossopharyngeal ganglion Moderate Regionally restricted euxassay_014251_06
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_014251_06
TS23: vestibulo-cochlear ganglion Moderate Regionally restricted euxassay_014251_06
TS23: dorsal root ganglion Moderate Regionally restricted euxassay_014251_06
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_014251_06
TS23: rest of cerebellum mantle layer Weak Regionally restricted euxassay_014251_06
TS23: midbrain mantle layer Weak Regionally restricted euxassay_014251_06
TS23: pons mantle layer Weak Regionally restricted euxassay_014251_06
TS23: medulla oblongata basal plate mantle layer Moderate Regionally restricted euxassay_014251_06
TS23: medulla oblongata alar plate mantle layer Moderate Regionally restricted euxassay_014251_06
TS23: submandibular gland primordium Weak Regionally restricted euxassay_014251_06
Specimen euxassay_014251_07: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_014251_07
TS23: vestibulo-cochlear ganglion Moderate Regionally restricted euxassay_014251_07
TS23: vagus ganglion Moderate Regionally restricted euxassay_014251_07
TS23: dorsal root ganglion Moderate Regionally restricted euxassay_014251_07
TS23: diencephalon lateral wall mantle layer Moderate Regionally restricted euxassay_014251_07
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_014251_07
TS23: midbrain mantle layer Weak Regionally restricted euxassay_014251_07
TS23: rest of cerebellum mantle layer Weak Regionally restricted euxassay_014251_07
TS23: pons mantle layer Weak Regionally restricted euxassay_014251_07
TS23: medulla oblongata alar plate mantle layer Moderate Regionally restricted euxassay_014251_07
TS23: medulla oblongata basal plate mantle layer Moderate Regionally restricted euxassay_014251_07
TS23: pancreas Weak Regionally restricted euxassay_014251_07
TS23: submandibular gland primordium Weak Regionally restricted euxassay_014251_07
Specimen euxassay_014251_08: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_014251_08
TS23: dorsal root ganglion Moderate Regionally restricted euxassay_014251_08
TS23: diencephalon lateral wall mantle layer Moderate Regionally restricted euxassay_014251_08
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_014251_08
TS23: rest of cerebellum mantle layer Weak Regionally restricted euxassay_014251_08
TS23: pons mantle layer Weak Regionally restricted euxassay_014251_08
TS23: midbrain mantle layer Weak Regionally restricted euxassay_014251_08
TS23: spinal cord mantle layer Moderate Regionally restricted euxassay_014251_08
TS23: medulla oblongata basal plate mantle layer Moderate Regionally restricted euxassay_014251_08
TS23: medulla oblongata alar plate mantle layer Moderate Regionally restricted euxassay_014251_08
TS23: pancreas Moderate Regionally restricted euxassay_014251_08
Specimen euxassay_014251_09: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: dorsal root ganglion Weak Regionally restricted euxassay_014251_09
TS23: diencephalon lateral wall mantle layer Moderate Regionally restricted euxassay_014251_09
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_014251_09
TS23: pons mantle layer Moderate Regionally restricted euxassay_014251_09
TS23: rest of cerebellum mantle layer Moderate Regionally restricted euxassay_014251_09
TS23: midbrain mantle layer Moderate Regionally restricted euxassay_014251_09
TS23: spinal cord mantle layer Moderate Regionally restricted euxassay_014251_09
TS23: medulla oblongata basal plate mantle layer Moderate Regionally restricted euxassay_014251_09
TS23: medulla oblongata alar plate mantle layer Moderate Regionally restricted euxassay_014251_09
TS23: pancreas Moderate Regionally restricted euxassay_014251_09
TS23: thyroid gland Weak Regionally restricted euxassay_014251_09
Specimen euxassay_014251_10: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: dorsal root ganglion Weak Regionally restricted euxassay_014251_10
TS23: diencephalon lateral wall mantle layer Moderate Regionally restricted euxassay_014251_10
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_014251_10
TS23: midbrain mantle layer Moderate Regionally restricted euxassay_014251_10
TS23: pons mantle layer Moderate Regionally restricted euxassay_014251_10
TS23: rest of cerebellum mantle layer Moderate Regionally restricted euxassay_014251_10
TS23: medulla oblongata basal plate mantle layer Moderate Regionally restricted euxassay_014251_10
TS23: spinal cord mantle layer Moderate Regionally restricted euxassay_014251_10
Specimen euxassay_014251_11: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: diencephalon lateral wall mantle layer Moderate Regionally restricted euxassay_014251_11
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_014251_11
TS23: pons mantle layer Moderate Regionally restricted euxassay_014251_11
TS23: midbrain mantle layer Moderate Regionally restricted euxassay_014251_11
TS23: medulla oblongata alar plate mantle layer Moderate Regionally restricted euxassay_014251_11
TS23: medulla oblongata basal plate mantle layer Moderate Regionally restricted euxassay_014251_11
TS23: spinal cord mantle layer Moderate Regionally restricted euxassay_014251_11
Specimen euxassay_014251_12: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: diencephalon lateral wall mantle layer Moderate Regionally restricted euxassay_014251_12
TS23: telencephalon mantle layer Weak Regionally restricted euxassay_014251_12
TS23: pons mantle layer Moderate Regionally restricted euxassay_014251_12
TS23: midbrain mantle layer Moderate Regionally restricted euxassay_014251_12
TS23: medulla oblongata alar plate mantle layer Moderate Regionally restricted euxassay_014251_12
TS23: medulla oblongata basal plate mantle layer Moderate Regionally restricted euxassay_014251_12
TS23: spinal cord mantle layer Moderate Regionally restricted euxassay_014251_12
Specimen euxassay_014251_13: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: dorsal root ganglion Weak Regionally restricted euxassay_014251_13
TS23: diencephalon lateral wall mantle layer Moderate Regionally restricted euxassay_014251_13
TS23: telencephalon mantle layer Weak Regionally restricted euxassay_014251_13
TS23: pons mantle layer Moderate Regionally restricted euxassay_014251_13
TS23: midbrain mantle layer Moderate Regionally restricted euxassay_014251_13
TS23: spinal cord mantle layer Moderate Regionally restricted euxassay_014251_13
TS23: medulla oblongata basal plate mantle layer Moderate Regionally restricted euxassay_014251_13
TS23: medulla oblongata alar plate mantle layer Moderate Regionally restricted euxassay_014251_13
TS23: pancreas Moderate Regionally restricted euxassay_014251_13
Specimen euxassay_014251_14: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: dorsal root ganglion Weak Regionally restricted euxassay_014251_14
TS23: telencephalon mantle layer Weak Regionally restricted euxassay_014251_14
TS23: diencephalon lateral wall mantle layer Weak Regionally restricted euxassay_014251_14
TS23: midbrain mantle layer Moderate Regionally restricted euxassay_014251_14
TS23: pons mantle layer Moderate Regionally restricted euxassay_014251_14
TS23: medulla oblongata alar plate mantle layer Moderate Regionally restricted euxassay_014251_14
TS23: medulla oblongata basal plate mantle layer Moderate Regionally restricted euxassay_014251_14
TS23: spinal cord mantle layer Moderate Regionally restricted euxassay_014251_14
TS23: pancreas Weak Regionally restricted euxassay_014251_14
TS23: thyroid gland Weak Regionally restricted euxassay_014251_14
Specimen euxassay_014251_15: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: dorsal root ganglion Weak Regionally restricted euxassay_014251_15
TS23: telencephalon mantle layer Weak Regionally restricted euxassay_014251_15
TS23: diencephalon lateral wall mantle layer Weak Regionally restricted euxassay_014251_15
TS23: pons mantle layer Moderate Regionally restricted euxassay_014251_15
TS23: midbrain mantle layer Moderate Regionally restricted euxassay_014251_15
TS23: rest of cerebellum mantle layer Moderate Regionally restricted euxassay_014251_15
TS23: medulla oblongata basal plate mantle layer Moderate Regionally restricted euxassay_014251_15
TS23: medulla oblongata alar plate mantle layer Moderate Regionally restricted euxassay_014251_15
Specimen euxassay_014251_16: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: vestibulo-cochlear ganglion Moderate Regionally restricted euxassay_014251_16
TS23: vagus ganglion Moderate Regionally restricted euxassay_014251_16
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_014251_16
TS23: dorsal root ganglion Weak Regionally restricted euxassay_014251_16
TS23: telencephalon mantle layer Weak Regionally restricted euxassay_014251_16
TS23: diencephalon lateral wall mantle layer Weak Regionally restricted euxassay_014251_16
TS23: pons mantle layer Moderate Regionally restricted euxassay_014251_16
TS23: rest of cerebellum mantle layer Weak Regionally restricted euxassay_014251_16
TS23: midbrain mantle layer Weak Regionally restricted euxassay_014251_16
TS23: medulla oblongata alar plate mantle layer Moderate Regionally restricted euxassay_014251_16
TS23: medulla oblongata basal plate mantle layer Moderate Regionally restricted euxassay_014251_16
TS23: submandibular gland primordium Weak Regionally restricted euxassay_014251_16
Specimen euxassay_014251_17: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_014251_17
TS23: vestibulo-cochlear ganglion Moderate Regionally restricted euxassay_014251_17
TS23: glossopharyngeal ganglion Moderate Regionally restricted euxassay_014251_17
TS23: dorsal root ganglion Weak Regionally restricted euxassay_014251_17
TS23: diencephalon lateral wall mantle layer Weak Regionally restricted euxassay_014251_17
TS23: telencephalon mantle layer Weak Regionally restricted euxassay_014251_17
TS23: rest of cerebellum mantle layer Weak Regionally restricted euxassay_014251_17
TS23: pons mantle layer Moderate Regionally restricted euxassay_014251_17
TS23: midbrain mantle layer Moderate Regionally restricted euxassay_014251_17
TS23: medulla oblongata basal plate mantle layer Moderate Regionally restricted euxassay_014251_17
TS23: medulla oblongata alar plate mantle layer Moderate Regionally restricted euxassay_014251_17
TS23: submandibular gland primordium Weak Regionally restricted euxassay_014251_17
Specimen euxassay_014251_18: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_014251_18
TS23: vestibulo-cochlear ganglion Moderate Regionally restricted euxassay_014251_18
TS23: glossopharyngeal ganglion Moderate Regionally restricted euxassay_014251_18
TS23: telencephalon mantle layer Weak Regionally restricted euxassay_014251_18
TS23: diencephalon lateral wall mantle layer Weak Regionally restricted euxassay_014251_18
TS23: pons mantle layer Moderate Regionally restricted euxassay_014251_18
TS23: rest of cerebellum mantle layer Moderate Regionally restricted euxassay_014251_18
TS23: midbrain mantle layer Moderate Regionally restricted euxassay_014251_18
TS23: submandibular gland primordium Weak Regionally restricted euxassay_014251_18
Specimen euxassay_014251_19: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_014251_19
TS23: facial ganglion Moderate Regionally restricted euxassay_014251_19
TS23: telencephalon mantle layer Weak Regionally restricted euxassay_014251_19
TS23: midbrain mantle layer Moderate Regionally restricted euxassay_014251_19
TS23: rest of cerebellum mantle layer Moderate Regionally restricted euxassay_014251_19
Specimen euxassay_014251_20: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_014251_20
TS23: facial ganglion Moderate Regionally restricted euxassay_014251_20
TS23: telencephalon mantle layer Weak Regionally restricted euxassay_014251_20
TS23: rest of cerebellum mantle layer Weak Regionally restricted euxassay_014251_20
TS23: midbrain mantle layer Weak Regionally restricted euxassay_014251_20
Specimen euxassay_014251_21: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_014251_21
TS23: telencephalon mantle layer Weak Regionally restricted euxassay_014251_21
Specimen euxassay_014251_22: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: neural retina Weak Regionally restricted euxassay_014251_22
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_014251_22
TS23: telencephalon mantle layer Weak Regionally restricted euxassay_014251_22
Specimen euxassay_014251_23: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: neural retina Weak Regionally restricted euxassay_014251_23
TS23: telencephalon mantle layer Weak Regionally restricted euxassay_014251_23
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
05/21/2024
MGI 6.23 		The Jackson Laboratory