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Gene Expression Data
Assay Details
Assay
Reference: J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
Assay type: RNA in situ
MGI Accession ID: MGI:4825439
Gene symbol: Hoxd9
Gene name: homeobox D9
Probe: MGC clone 29423
Probe preparation: Antisense labelled with digoxigenin RNA
Visualized with: Alkaline phosphatase
Assay notes: Cryosections of fresh frozen material were fixed in 4% paraformaldehyde for 20 min. before further processing. A tyramide-biotin/streptavidin amplification step was included in the in situ hybridization procedure.
Results
Specimen euxassay_008880_01: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: forearm Strong Regionally restricted euxassay_008880_01
Specimen euxassay_008880_02: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: clavicle Strong Regionally restricted euxassay_008880_02
TS23: hand Strong Regionally restricted euxassay_008880_02
TS23: upper leg Strong Regionally restricted euxassay_008880_02
Specimen euxassay_008880_03: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: clavicle Strong Regionally restricted euxassay_008880_03
TS23: hand Strong Regionally restricted euxassay_008880_03
Specimen euxassay_008880_04: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: testis Strong Regionally restricted euxassay_008880_04
TS23: clavicle Strong Regionally restricted euxassay_008880_04
TS23: hand Strong Regionally restricted euxassay_008880_04
Specimen euxassay_008880_05: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: testis Strong Regionally restricted euxassay_008880_05
Specimen euxassay_008880_06: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: testis Strong Regionally restricted euxassay_008880_06
TS23: foot Strong Regionally restricted euxassay_008880_06
TS23: midgut Strong Regionally restricted euxassay_008880_06
Specimen euxassay_008880_07: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: spinal cord Strong Regionally restricted euxassay_008880_07
TS23: testis Strong Regionally restricted euxassay_008880_07
TS23: metanephros Strong Regionally restricted euxassay_008880_07
TS23: foot Strong Regionally restricted euxassay_008880_07
TS23: midgut Strong Regionally restricted euxassay_008880_07
Specimen euxassay_008880_08: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: spinal cord Strong Regionally restricted euxassay_008880_08
TS23: metanephros Strong Regionally restricted euxassay_008880_08
TS23: testis Strong Regionally restricted euxassay_008880_08
TS23: foot Strong Regionally restricted euxassay_008880_08
TS23: midgut Strong Regionally restricted euxassay_008880_08
Specimen euxassay_008880_09: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: spinal cord Strong Regionally restricted euxassay_008880_09
TS23: metanephros Strong Regionally restricted euxassay_008880_09
TS23: midgut Strong Regionally restricted euxassay_008880_09
Specimen euxassay_008880_10: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: spinal cord Strong Regionally restricted euxassay_008880_10
TS23: metanephros Strong Regionally restricted euxassay_008880_10
TS23: midgut Strong Regionally restricted euxassay_008880_10
Specimen euxassay_008880_11: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: spinal cord Strong Regionally restricted euxassay_008880_11
TS23: midgut Strong Regionally restricted euxassay_008880_11
Specimen euxassay_008880_12: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: spinal cord Strong Regionally restricted euxassay_008880_12
TS23: midgut Strong Regionally restricted euxassay_008880_12
Specimen euxassay_008880_13: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: spinal cord Strong Regionally restricted euxassay_008880_13
Specimen euxassay_008880_14: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: spinal cord Strong Regionally restricted euxassay_008880_14
Specimen euxassay_008880_15: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: spinal cord Strong Regionally restricted euxassay_008880_15
TS23: metanephros Strong Regionally restricted euxassay_008880_15
Specimen euxassay_008880_16: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: spinal cord Strong Regionally restricted euxassay_008880_16
TS23: metanephros Strong Regionally restricted euxassay_008880_16
Specimen euxassay_008880_17: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: spinal cord Strong Regionally restricted euxassay_008880_17
TS23: metanephros Strong Regionally restricted euxassay_008880_17
Specimen euxassay_008880_18: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: spinal cord Strong Regionally restricted euxassay_008880_18
TS23: testis Strong Regionally restricted euxassay_008880_18
TS23: metanephros Strong Regionally restricted euxassay_008880_18
TS23: foot Strong Regionally restricted euxassay_008880_18
Specimen euxassay_008880_19: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: spinal cord Strong Regionally restricted euxassay_008880_19
TS23: metanephros Strong Regionally restricted euxassay_008880_19
TS23: testis Strong Regionally restricted euxassay_008880_19
TS23: clavicle Strong Regionally restricted euxassay_008880_19
TS23: foot Strong Regionally restricted euxassay_008880_19
Specimen euxassay_008880_20: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: testis Strong Regionally restricted euxassay_008880_20
TS23: clavicle Strong Regionally restricted euxassay_008880_20
TS23: foot Strong Regionally restricted euxassay_008880_20
Specimen euxassay_008880_21: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: clavicle Strong Regionally restricted euxassay_008880_21
TS23: hand Strong Regionally restricted euxassay_008880_21
TS23: foot Strong Regionally restricted euxassay_008880_21
Specimen euxassay_008880_22: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: clavicle Strong Regionally restricted euxassay_008880_22
TS23: hand Strong Regionally restricted euxassay_008880_22
Specimen euxassay_008880_23: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: forearm Strong Regionally restricted euxassay_008880_23
TS23: hand Strong Regionally restricted euxassay_008880_23
Specimen euxassay_008880_24: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: forearm Strong Regionally restricted euxassay_008880_24
TS23: upper leg Strong Regionally restricted euxassay_008880_24
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
05/07/2024
MGI 6.23 		The Jackson Laboratory