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Gene Expression Data
Assay Details
Assay
Reference: J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
Assay type: RNA in situ
MGI Accession ID: MGI:4825226
Gene symbol: Gria1
Gene name: glutamate receptor, ionotropic, AMPA1 (alpha 1)
Probe: MGC clone 73512
Probe preparation: Antisense labelled with digoxigenin RNA
Visualized with: Alkaline phosphatase
Assay notes: Cryosections of fresh frozen material were fixed in 4% paraformaldehyde for 20 min. before further processing. A tyramide-biotin/streptavidin amplification step was included in the in situ hybridization procedure.
Results
Specimen euxassay_008537_01: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: neural retina Moderate Regionally restricted euxassay_008537_01
TS23: telencephalon mantle layer Strong Regionally restricted euxassay_008537_01
Specimen euxassay_008537_02: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: neural retina Weak Regionally restricted euxassay_008537_02
TS23: telencephalon mantle layer Strong Regionally restricted euxassay_008537_02
Specimen euxassay_008537_03: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: neural retina Moderate Regionally restricted euxassay_008537_03
TS23: telencephalon mantle layer Strong Regionally restricted euxassay_008537_03
TS23: rest of cerebellum mantle layer Strong Regionally restricted euxassay_008537_03
Specimen euxassay_008537_04: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: neural retina Weak Regionally restricted euxassay_008537_04
TS23: rest of cerebellum mantle layer Strong Regionally restricted euxassay_008537_04
TS23: telencephalon mantle layer Strong Regionally restricted euxassay_008537_04
Specimen euxassay_008537_05: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: rest of cerebellum mantle layer Strong Regionally restricted euxassay_008537_05
TS23: telencephalon mantle layer Strong Regionally restricted euxassay_008537_05
TS23: midbrain mantle layer Strong Regionally restricted euxassay_008537_05
TS23: saccule Moderate Regionally restricted euxassay_008537_05
Specimen euxassay_008537_06: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: rest of cerebellum mantle layer Strong Regionally restricted euxassay_008537_06
TS23: telencephalon mantle layer Strong Regionally restricted euxassay_008537_06
TS23: pons mantle layer Strong Regionally restricted euxassay_008537_06
TS23: midbrain mantle layer Strong Regionally restricted euxassay_008537_06
TS23: diencephalon lateral wall mantle layer Strong Regionally restricted euxassay_008537_06
TS23: medulla oblongata alar plate mantle layer Strong Regionally restricted euxassay_008537_06
TS23: saccule Moderate Regionally restricted euxassay_008537_06
Specimen euxassay_008537_07: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: pons mantle layer Strong Regionally restricted euxassay_008537_07
TS23: rest of cerebellum mantle layer Strong Regionally restricted euxassay_008537_07
TS23: telencephalon mantle layer Strong Regionally restricted euxassay_008537_07
TS23: diencephalon lateral wall mantle layer Strong Regionally restricted euxassay_008537_07
TS23: midbrain mantle layer Strong Regionally restricted euxassay_008537_07
TS23: medulla oblongata alar plate mantle layer Strong Regionally restricted euxassay_008537_07
TS23: palatal shelf Moderate Regionally restricted euxassay_008537_07
TS23: saccule Moderate Regionally restricted euxassay_008537_07
Specimen euxassay_008537_08: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: pons mantle layer Strong Regionally restricted euxassay_008537_08
TS23: rest of cerebellum mantle layer Strong Regionally restricted euxassay_008537_08
TS23: telencephalon mantle layer Strong Regionally restricted euxassay_008537_08
TS23: midbrain mantle layer Strong Regionally restricted euxassay_008537_08
TS23: diencephalon lateral wall mantle layer Strong Regionally restricted euxassay_008537_08
TS23: hypothalamus mantle layer Strong Regionally restricted euxassay_008537_08
TS23: medulla oblongata alar plate mantle layer Strong Regionally restricted euxassay_008537_08
TS23: medulla oblongata basal plate mantle layer Strong Regionally restricted euxassay_008537_08
TS23: palatal shelf Moderate Regionally restricted euxassay_008537_08
TS23: saccule Moderate Regionally restricted euxassay_008537_08
Specimen euxassay_008537_09: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: pons mantle layer Strong Regionally restricted euxassay_008537_09
TS23: rest of cerebellum mantle layer Strong Regionally restricted euxassay_008537_09
TS23: telencephalon mantle layer Strong Regionally restricted euxassay_008537_09
TS23: midbrain mantle layer Strong Regionally restricted euxassay_008537_09
TS23: diencephalon lateral wall mantle layer Strong Regionally restricted euxassay_008537_09
TS23: hypothalamus mantle layer Strong Regionally restricted euxassay_008537_09
TS23: medulla oblongata alar plate mantle layer Strong Regionally restricted euxassay_008537_09
TS23: medulla oblongata basal plate mantle layer Strong Regionally restricted euxassay_008537_09
TS23: palatal shelf Moderate Regionally restricted euxassay_008537_09
Specimen euxassay_008537_10: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: pons mantle layer Strong Regionally restricted euxassay_008537_10
TS23: rest of cerebellum mantle layer Strong Regionally restricted euxassay_008537_10
TS23: telencephalon mantle layer Strong Regionally restricted euxassay_008537_10
TS23: olfactory cortex mantle layer Strong Regionally restricted euxassay_008537_10
TS23: midbrain mantle layer Strong Regionally restricted euxassay_008537_10
TS23: diencephalon lateral wall mantle layer Strong Regionally restricted euxassay_008537_10
TS23: hypothalamus mantle layer Strong Regionally restricted euxassay_008537_10
TS23: medulla oblongata alar plate mantle layer Strong Regionally restricted euxassay_008537_10
TS23: medulla oblongata basal plate mantle layer Strong Regionally restricted euxassay_008537_10
TS23: spinal cord mantle layer Strong Uniform euxassay_008537_10
TS23: palatal shelf Moderate Regionally restricted euxassay_008537_10
Specimen euxassay_008537_11: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon mantle layer Strong Regionally restricted euxassay_008537_11
TS23: rest of cerebellum mantle layer Strong Regionally restricted euxassay_008537_11
TS23: pons mantle layer Strong Regionally restricted euxassay_008537_11
TS23: olfactory cortex mantle layer Strong Regionally restricted euxassay_008537_11
TS23: midbrain mantle layer Strong Regionally restricted euxassay_008537_11
TS23: diencephalon lateral wall mantle layer Strong Regionally restricted euxassay_008537_11
TS23: hypothalamus mantle layer Strong Regionally restricted euxassay_008537_11
TS23: medulla oblongata basal plate mantle layer Strong Regionally restricted euxassay_008537_11
TS23: spinal cord mantle layer Strong Uniform euxassay_008537_11
TS23: palatal shelf Weak Regionally restricted euxassay_008537_11
Specimen euxassay_008537_12: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: olfactory cortex mantle layer Strong Regionally restricted euxassay_008537_12
TS23: telencephalon mantle layer Strong Regionally restricted euxassay_008537_12
TS23: rest of cerebellum mantle layer Strong Regionally restricted euxassay_008537_12
TS23: pons mantle layer Strong Regionally restricted euxassay_008537_12
TS23: midbrain mantle layer Strong Regionally restricted euxassay_008537_12
TS23: diencephalon lateral wall mantle layer Strong Regionally restricted euxassay_008537_12
TS23: hypothalamus mantle layer Strong Regionally restricted euxassay_008537_12
TS23: medulla oblongata basal plate mantle layer Strong Regionally restricted euxassay_008537_12
TS23: spinal cord mantle layer Strong Uniform euxassay_008537_12
TS23: palatal shelf Weak Regionally restricted euxassay_008537_12
Specimen euxassay_008537_13: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: olfactory cortex mantle layer Strong Regionally restricted euxassay_008537_13
TS23: telencephalon mantle layer Strong Regionally restricted euxassay_008537_13
TS23: rest of cerebellum mantle layer Strong Regionally restricted euxassay_008537_13
TS23: pons mantle layer Strong Regionally restricted euxassay_008537_13
TS23: midbrain mantle layer Strong Regionally restricted euxassay_008537_13
TS23: diencephalon lateral wall mantle layer Strong Regionally restricted euxassay_008537_13
TS23: hypothalamus mantle layer Strong Regionally restricted euxassay_008537_13
TS23: medulla oblongata basal plate mantle layer Strong Regionally restricted euxassay_008537_13
TS23: spinal cord mantle layer Strong Uniform euxassay_008537_13
TS23: palatal shelf Weak Regionally restricted euxassay_008537_13
Specimen euxassay_008537_14: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: pons mantle layer Strong Regionally restricted euxassay_008537_14
TS23: rest of cerebellum mantle layer Strong Regionally restricted euxassay_008537_14
TS23: telencephalon mantle layer Strong Regionally restricted euxassay_008537_14
TS23: midbrain mantle layer Strong Regionally restricted euxassay_008537_14
TS23: diencephalon lateral wall mantle layer Strong Regionally restricted euxassay_008537_14
TS23: hypothalamus mantle layer Strong Regionally restricted euxassay_008537_14
TS23: medulla oblongata basal plate mantle layer Strong Regionally restricted euxassay_008537_14
TS23: spinal cord mantle layer Strong Uniform euxassay_008537_14
Specimen euxassay_008537_15: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon mantle layer Strong Regionally restricted euxassay_008537_15
TS23: rest of cerebellum mantle layer Strong Regionally restricted euxassay_008537_15
TS23: pons mantle layer Strong Regionally restricted euxassay_008537_15
TS23: diencephalon lateral wall mantle layer Strong Regionally restricted euxassay_008537_15
TS23: hypothalamus mantle layer Strong Regionally restricted euxassay_008537_15
TS23: midbrain mantle layer Strong Regionally restricted euxassay_008537_15
TS23: medulla oblongata basal plate mantle layer Strong Regionally restricted euxassay_008537_15
TS23: spinal cord mantle layer Strong Uniform euxassay_008537_15
TS23: palatal shelf Weak Regionally restricted euxassay_008537_15
Specimen euxassay_008537_16: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: olfactory cortex mantle layer Strong Regionally restricted euxassay_008537_16
TS23: telencephalon mantle layer Strong Regionally restricted euxassay_008537_16
TS23: rest of cerebellum mantle layer Strong Regionally restricted euxassay_008537_16
TS23: pons mantle layer Strong Regionally restricted euxassay_008537_16
TS23: midbrain mantle layer Strong Regionally restricted euxassay_008537_16
TS23: diencephalon lateral wall mantle layer Strong Regionally restricted euxassay_008537_16
TS23: hypothalamus mantle layer Strong Regionally restricted euxassay_008537_16
TS23: medulla oblongata basal plate mantle layer Strong Regionally restricted euxassay_008537_16
TS23: medulla oblongata alar plate mantle layer Strong Regionally restricted euxassay_008537_16
TS23: spinal cord mantle layer Strong Uniform euxassay_008537_16
TS23: palatal shelf Weak Regionally restricted euxassay_008537_16
Specimen euxassay_008537_17: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: olfactory cortex mantle layer Strong Regionally restricted euxassay_008537_17
TS23: telencephalon mantle layer Strong Regionally restricted euxassay_008537_17
TS23: rest of cerebellum mantle layer Strong Regionally restricted euxassay_008537_17
TS23: pons mantle layer Strong Regionally restricted euxassay_008537_17
TS23: midbrain mantle layer Strong Regionally restricted euxassay_008537_17
TS23: diencephalon lateral wall mantle layer Strong Regionally restricted euxassay_008537_17
TS23: hypothalamus mantle layer Strong Regionally restricted euxassay_008537_17
TS23: medulla oblongata alar plate mantle layer Strong Regionally restricted euxassay_008537_17
TS23: medulla oblongata basal plate mantle layer Strong Regionally restricted euxassay_008537_17
TS23: spinal cord mantle layer Strong Uniform euxassay_008537_17
TS23: palatal shelf Weak Regionally restricted euxassay_008537_17
Specimen euxassay_008537_18: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: pons mantle layer Strong Regionally restricted euxassay_008537_18
TS23: rest of cerebellum mantle layer Strong Regionally restricted euxassay_008537_18
TS23: olfactory cortex mantle layer Strong Regionally restricted euxassay_008537_18
TS23: telencephalon mantle layer Strong Regionally restricted euxassay_008537_18
TS23: midbrain mantle layer Strong Regionally restricted euxassay_008537_18
TS23: diencephalon lateral wall mantle layer Strong Regionally restricted euxassay_008537_18
TS23: hypothalamus mantle layer Strong Regionally restricted euxassay_008537_18
TS23: medulla oblongata alar plate mantle layer Strong Regionally restricted euxassay_008537_18
TS23: spinal cord mantle layer Strong Uniform euxassay_008537_18
TS23: palatal shelf Weak Regionally restricted euxassay_008537_18
Specimen euxassay_008537_19: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: olfactory cortex mantle layer Strong Regionally restricted euxassay_008537_19
TS23: telencephalon mantle layer Strong Regionally restricted euxassay_008537_19
TS23: rest of cerebellum mantle layer Strong Regionally restricted euxassay_008537_19
TS23: pons mantle layer Strong Regionally restricted euxassay_008537_19
TS23: midbrain mantle layer Strong Regionally restricted euxassay_008537_19
TS23: diencephalon lateral wall mantle layer Strong Regionally restricted euxassay_008537_19
TS23: medulla oblongata alar plate mantle layer Strong Regionally restricted euxassay_008537_19
TS23: palatal shelf Moderate Regionally restricted euxassay_008537_19
TS23: saccule Moderate Regionally restricted euxassay_008537_19
Specimen euxassay_008537_20: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: rest of cerebellum mantle layer Strong Regionally restricted euxassay_008537_20
TS23: pons mantle layer Strong Regionally restricted euxassay_008537_20
TS23: telencephalon mantle layer Strong Regionally restricted euxassay_008537_20
TS23: midbrain mantle layer Strong Regionally restricted euxassay_008537_20
TS23: diencephalon lateral wall mantle layer Strong Regionally restricted euxassay_008537_20
TS23: palatal shelf Moderate Regionally restricted euxassay_008537_20
TS23: saccule Moderate Regionally restricted euxassay_008537_20
Specimen euxassay_008537_21: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: pons mantle layer Strong Regionally restricted euxassay_008537_21
TS23: rest of cerebellum mantle layer Strong Regionally restricted euxassay_008537_21
TS23: telencephalon mantle layer Strong Regionally restricted euxassay_008537_21
TS23: palatal shelf Moderate Regionally restricted euxassay_008537_21
TS23: saccule Moderate Regionally restricted euxassay_008537_21
Specimen euxassay_008537_22: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: rest of cerebellum mantle layer Strong Regionally restricted euxassay_008537_22
TS23: telencephalon mantle layer Strong Regionally restricted euxassay_008537_22
TS23: saccule Weak Regionally restricted euxassay_008537_22
Specimen euxassay_008537_23: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon mantle layer Strong Regionally restricted euxassay_008537_23
Specimen euxassay_008537_24: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: neural retina Weak Regionally restricted euxassay_008537_24
TS23: telencephalon mantle layer Strong Regionally restricted euxassay_008537_24
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
05/07/2024
MGI 6.23 		The Jackson Laboratory