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Gene Expression Data
Assay Details
Assay
Reference: J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
Assay type: RNA in situ
MGI Accession ID: MGI:4824986
Gene symbol: Galnt9
Gene name: polypeptide N-acetylgalactosaminyltransferase 9
Probe: MGC clone 63144
Probe preparation: Antisense labelled with digoxigenin RNA
Visualized with: Alkaline phosphatase
Assay notes: Cryosections of fresh frozen material were fixed in 4% paraformaldehyde for 20 min. before further processing. A tyramide-biotin/streptavidin amplification step was included in the in situ hybridization procedure.
Results
Specimen euxassay_006920_01: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: brain Moderate Regionally restricted euxassay_006920_01
Specimen euxassay_006920_02: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: brain Moderate Regionally restricted euxassay_006920_02
TS23: interdigital region between hindlimb digits 1 and 2 mesenchyme Moderate Regionally restricted euxassay_006920_02
TS23: interdigital region between hindlimb digits 2 and 3 mesenchyme Moderate Regionally restricted euxassay_006920_02
TS23: interdigital region between hindlimb digits 4 and 5 mesenchyme Moderate Regionally restricted euxassay_006920_02
TS23: interdigital region between hindlimb digits 3 and 4 mesenchyme Moderate Regionally restricted euxassay_006920_02
TS23: interdigital region between forelimb digits 4 and 5 mesenchyme Moderate Regionally restricted euxassay_006920_02
TS23: interdigital region between forelimb digits 3 and 4 mesenchyme Moderate Regionally restricted euxassay_006920_02
TS23: interdigital region between forelimb digits 2 and 3 mesenchyme Moderate Regionally restricted euxassay_006920_02
TS23: interdigital region between forelimb digits 1 and 2 mesenchyme Moderate Regionally restricted euxassay_006920_02
Specimen euxassay_006920_03: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: brain Moderate Regionally restricted euxassay_006920_03
TS23: interdigital region between hindlimb digits 4 and 5 mesenchyme Moderate Regionally restricted euxassay_006920_03
TS23: interdigital region between hindlimb digits 3 and 4 mesenchyme Moderate Regionally restricted euxassay_006920_03
TS23: interdigital region between hindlimb digits 2 and 3 mesenchyme Moderate Regionally restricted euxassay_006920_03
TS23: interdigital region between hindlimb digits 1 and 2 mesenchyme Moderate Regionally restricted euxassay_006920_03
TS23: interdigital region between forelimb digits 1 and 2 mesenchyme Moderate Regionally restricted euxassay_006920_03
TS23: interdigital region between forelimb digits 2 and 3 mesenchyme Moderate Regionally restricted euxassay_006920_03
TS23: interdigital region between forelimb digits 3 and 4 mesenchyme Moderate Regionally restricted euxassay_006920_03
TS23: interdigital region between forelimb digits 4 and 5 mesenchyme Moderate Regionally restricted euxassay_006920_03
Specimen euxassay_006920_04: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: brain Moderate Regionally restricted euxassay_006920_04
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_006920_04
TS23: facial ganglion Moderate Regionally restricted euxassay_006920_04
TS23: interdigital region between hindlimb digits 1 and 2 mesenchyme Moderate Regionally restricted euxassay_006920_04
TS23: interdigital region between hindlimb digits 2 and 3 mesenchyme Moderate Regionally restricted euxassay_006920_04
TS23: interdigital region between hindlimb digits 3 and 4 mesenchyme Moderate Regionally restricted euxassay_006920_04
TS23: interdigital region between hindlimb digits 4 and 5 mesenchyme Moderate Regionally restricted euxassay_006920_04
TS23: interdigital region between forelimb digits 1 and 2 mesenchyme Moderate Regionally restricted euxassay_006920_04
TS23: interdigital region between forelimb digits 2 and 3 mesenchyme Moderate Regionally restricted euxassay_006920_04
TS23: interdigital region between forelimb digits 3 and 4 mesenchyme Moderate Regionally restricted euxassay_006920_04
TS23: interdigital region between forelimb digits 4 and 5 mesenchyme Moderate Regionally restricted euxassay_006920_04
Specimen euxassay_006920_05: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: brain Moderate Regionally restricted euxassay_006920_05
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_006920_05
TS23: facial ganglion Moderate Regionally restricted euxassay_006920_05
TS23: interdigital region between hindlimb digits 1 and 2 mesenchyme Weak Regionally restricted euxassay_006920_05
TS23: interdigital region between hindlimb digits 2 and 3 mesenchyme Weak Regionally restricted euxassay_006920_05
TS23: interdigital region between hindlimb digits 3 and 4 mesenchyme Weak Regionally restricted euxassay_006920_05
TS23: interdigital region between hindlimb digits 4 and 5 mesenchyme Weak Regionally restricted euxassay_006920_05
TS23: interdigital region between forelimb digits 1 and 2 mesenchyme Moderate Regionally restricted euxassay_006920_05
TS23: interdigital region between forelimb digits 2 and 3 mesenchyme Moderate Regionally restricted euxassay_006920_05
TS23: interdigital region between forelimb digits 3 and 4 mesenchyme Moderate Regionally restricted euxassay_006920_05
TS23: interdigital region between forelimb digits 4 and 5 mesenchyme Moderate Regionally restricted euxassay_006920_05
Specimen euxassay_006920_06: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: brain Moderate Regionally restricted euxassay_006920_06
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_006920_06
TS23: facial ganglion Moderate Regionally restricted euxassay_006920_06
TS23: vestibulo-cochlear ganglion Weak Regionally restricted euxassay_006920_06
TS23: interdigital region between hindlimb digits 1 and 2 mesenchyme Weak Regionally restricted euxassay_006920_06
TS23: interdigital region between hindlimb digits 2 and 3 mesenchyme Weak Regionally restricted euxassay_006920_06
TS23: interdigital region between hindlimb digits 3 and 4 mesenchyme Weak Regionally restricted euxassay_006920_06
TS23: interdigital region between hindlimb digits 4 and 5 mesenchyme Weak Regionally restricted euxassay_006920_06
TS23: vibrissa Moderate Regionally restricted euxassay_006920_06
Specimen euxassay_006920_07: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: brain Moderate Regionally restricted euxassay_006920_07
TS23: dorsal root ganglion Moderate Regionally restricted euxassay_006920_07
TS23: vestibulo-cochlear ganglion Weak Regionally restricted euxassay_006920_07
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_006920_07
TS23: glossopharyngeal ganglion Moderate Regionally restricted euxassay_006920_07
TS23: vibrissa Moderate Regionally restricted euxassay_006920_07
Specimen euxassay_006920_08: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: brain Moderate Regionally restricted euxassay_006920_08
TS23: dorsal root ganglion Moderate Regionally restricted euxassay_006920_08
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_006920_08
TS23: vestibulo-cochlear ganglion Weak Regionally restricted euxassay_006920_08
TS23: vagus ganglion Moderate Regionally restricted euxassay_006920_08
TS23: glossopharyngeal ganglion Moderate Regionally restricted euxassay_006920_08
TS23: vibrissa Weak Regionally restricted euxassay_006920_08
Specimen euxassay_006920_09: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: brain Moderate Regionally restricted euxassay_006920_09
TS23: spinal cord Moderate Regionally restricted euxassay_006920_09
TS23: dorsal root ganglion Moderate Regionally restricted euxassay_006920_09
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_006920_09
TS23: vestibulo-cochlear ganglion Weak Regionally restricted euxassay_006920_09
TS23: vagus ganglion Moderate Regionally restricted euxassay_006920_09
TS23: vibrissa Moderate Regionally restricted euxassay_006920_09
Specimen euxassay_006920_10: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: brain Moderate Regionally restricted euxassay_006920_10
TS23: spinal cord Moderate Regionally restricted euxassay_006920_10
TS23: dorsal root ganglion Moderate Regionally restricted euxassay_006920_10
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_006920_10
TS23: trigeminal nerve Moderate Regionally restricted euxassay_006920_10
TS23: vibrissa Moderate Regionally restricted euxassay_006920_10
Specimen euxassay_006920_11: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: brain Moderate Regionally restricted euxassay_006920_11
TS23: spinal cord Moderate Regionally restricted euxassay_006920_11
TS23: dorsal root ganglion Moderate Regionally restricted euxassay_006920_11
TS23: trigeminal nerve Moderate Regionally restricted euxassay_006920_11
TS23: vibrissa Moderate Regionally restricted euxassay_006920_11
Specimen euxassay_006920_12: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: brain Moderate Regionally restricted euxassay_006920_12
TS23: spinal cord Moderate Regionally restricted euxassay_006920_12
TS23: dorsal root ganglion Moderate Regionally restricted euxassay_006920_12
TS23: vibrissa Moderate Regionally restricted euxassay_006920_12
Specimen euxassay_006920_13: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: brain Moderate Regionally restricted euxassay_006920_13
TS23: spinal cord Moderate Regionally restricted euxassay_006920_13
TS23: dorsal root ganglion Moderate Regionally restricted euxassay_006920_13
TS23: vibrissa Moderate Regionally restricted euxassay_006920_13
Specimen euxassay_006920_14: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: brain Moderate Regionally restricted euxassay_006920_14
TS23: spinal cord Moderate Regionally restricted euxassay_006920_14
TS23: dorsal root ganglion Moderate Regionally restricted euxassay_006920_14
TS23: vibrissa Moderate Regionally restricted euxassay_006920_14
Specimen euxassay_006920_15: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: brain Moderate Regionally restricted euxassay_006920_15
TS23: spinal cord Moderate Regionally restricted euxassay_006920_15
TS23: dorsal root ganglion Moderate Regionally restricted euxassay_006920_15
TS23: vibrissa Moderate Regionally restricted euxassay_006920_15
Specimen euxassay_006920_16: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: brain Moderate Regionally restricted euxassay_006920_16
TS23: spinal cord Moderate Regionally restricted euxassay_006920_16
TS23: vibrissa Moderate Regionally restricted euxassay_006920_16
Specimen euxassay_006920_17: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: brain Moderate Regionally restricted euxassay_006920_17
TS23: spinal cord Moderate Regionally restricted euxassay_006920_17
TS23: dorsal root ganglion Moderate Regionally restricted euxassay_006920_17
TS23: trigeminal nerve Moderate Regionally restricted euxassay_006920_17
TS23: vibrissa Moderate Regionally restricted euxassay_006920_17
Specimen euxassay_006920_18: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: brain Moderate Regionally restricted euxassay_006920_18
TS23: spinal cord Moderate Regionally restricted euxassay_006920_18
TS23: dorsal root ganglion Moderate Regionally restricted euxassay_006920_18
TS23: trigeminal nerve Moderate Regionally restricted euxassay_006920_18
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_006920_18
TS23: vagus ganglion Moderate Regionally restricted euxassay_006920_18
TS23: vestibulo-cochlear ganglion Weak Regionally restricted euxassay_006920_18
TS23: vibrissa Moderate Regionally restricted euxassay_006920_18
Specimen euxassay_006920_19: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: brain Moderate Regionally restricted euxassay_006920_19
TS23: vestibulo-cochlear ganglion Weak Regionally restricted euxassay_006920_19
TS23: vagus ganglion Moderate Regionally restricted euxassay_006920_19
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_006920_19
TS23: glossopharyngeal ganglion Moderate Regionally restricted euxassay_006920_19
TS23: vibrissa Moderate Regionally restricted euxassay_006920_19
Specimen euxassay_006920_20: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: brain Moderate Regionally restricted euxassay_006920_20
TS23: glossopharyngeal ganglion Moderate Regionally restricted euxassay_006920_20
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_006920_20
TS23: vestibulo-cochlear ganglion Weak Regionally restricted euxassay_006920_20
TS23: facial ganglion Moderate Regionally restricted euxassay_006920_20
Specimen euxassay_006920_21: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: brain Moderate Regionally restricted euxassay_006920_21
TS23: facial ganglion Moderate Regionally restricted euxassay_006920_21
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_006920_21
TS23: vibrissa Moderate Regionally restricted euxassay_006920_21
Specimen euxassay_006920_22: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: brain Moderate Regionally restricted euxassay_006920_22
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_006920_22
TS23: facial ganglion Moderate Regionally restricted euxassay_006920_22
TS23: vibrissa Moderate Regionally restricted euxassay_006920_22
Specimen euxassay_006920_23: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: brain Moderate Regionally restricted euxassay_006920_23
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_006920_23
TS23: vibrissa Moderate Regionally restricted euxassay_006920_23
Specimen euxassay_006920_24: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: brain Moderate Regionally restricted euxassay_006920_24
TS23: vibrissa Moderate Regionally restricted euxassay_006920_24
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
05/21/2024
MGI 6.23 		The Jackson Laboratory