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Gene Expression Data
Assay Details
Assay
Reference: J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
Assay type: RNA in situ
MGI Accession ID: MGI:4824941
Gene symbol: Ftsj3
Gene name: FtsJ RNA 2'-O-methyltransferase 3
Probe: MGC clone 18657
Probe preparation: Antisense labelled with digoxigenin RNA
Visualized with: Alkaline phosphatase
Assay notes: Cryosections of fresh frozen material were fixed in 4% paraformaldehyde for 20 min. before further processing. A tyramide-biotin/streptavidin amplification step was included in the in situ hybridization procedure.
Results
Specimen euxassay_006943_02: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: cerebral cortex marginal layer Moderate Regionally restricted euxassay_006943_02
Specimen euxassay_006943_03: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_006943_03
TS23: cerebral cortex marginal layer Moderate Regionally restricted euxassay_006943_03
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_006943_03
Specimen euxassay_006943_04: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_006943_04
TS23: cerebral cortex marginal layer Moderate Regionally restricted euxassay_006943_04
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_006943_04
Specimen euxassay_006943_05: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_006943_05
TS23: cerebral cortex marginal layer Moderate Regionally restricted euxassay_006943_05
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_006943_05
Specimen euxassay_006943_06: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_006943_06
TS23: vestibulo-cochlear ganglion Moderate Regionally restricted euxassay_006943_06
TS23: cerebral cortex marginal layer Moderate Regionally restricted euxassay_006943_06
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_006943_06
TS23: ovary Moderate Regionally restricted euxassay_006943_06
Specimen euxassay_006943_07: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_006943_07
TS23: vestibulo-cochlear ganglion Moderate Regionally restricted euxassay_006943_07
TS23: glossopharyngeal ganglion Moderate Regionally restricted euxassay_006943_07
TS23: dorsal root ganglion Moderate Regionally restricted euxassay_006943_07
TS23: cerebral cortex marginal layer Moderate Regionally restricted euxassay_006943_07
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_006943_07
TS23: pons mantle layer Moderate Regionally restricted euxassay_006943_07 trigeminal motor nucleus
TS23: ovary Moderate Regionally restricted euxassay_006943_07
Specimen euxassay_006943_08: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_006943_08
TS23: vagus ganglion Moderate Regionally restricted euxassay_006943_08
TS23: vestibulo-cochlear ganglion Weak Regionally restricted euxassay_006943_08
TS23: dorsal root ganglion Strong Regionally restricted euxassay_006943_08
TS23: cerebral cortex marginal layer Moderate Regionally restricted euxassay_006943_08
TS23: medulla oblongata basal plate mantle layer Moderate Regionally restricted euxassay_006943_08 facial motor nucleus
TS23: ovary Moderate Regionally restricted euxassay_006943_08
Specimen euxassay_006943_09: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: dorsal root ganglion Strong Regionally restricted euxassay_006943_09
TS23: cerebral cortex marginal layer Moderate Regionally restricted euxassay_006943_09
TS23: hypothalamus Moderate Regionally restricted euxassay_006943_09
TS23: medulla oblongata basal plate mantle layer Moderate Regionally restricted euxassay_006943_09 facial motor nucleus
Specimen euxassay_006943_10: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: dorsal root ganglion Strong Regionally restricted euxassay_006943_10
TS23: cerebral cortex marginal layer Moderate Regionally restricted euxassay_006943_10
TS23: olfactory cortex marginal layer Moderate Regionally restricted euxassay_006943_10
TS23: hypothalamus Moderate Regionally restricted euxassay_006943_10
Specimen euxassay_006943_11: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: dorsal root ganglion Strong Regionally restricted euxassay_006943_11
TS23: olfactory cortex marginal layer Moderate Regionally restricted euxassay_006943_11
TS23: cerebral cortex marginal layer Moderate Regionally restricted euxassay_006943_11
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_006943_11
TS23: hypothalamus Moderate Regionally restricted euxassay_006943_11
Specimen euxassay_006943_12: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: dorsal root ganglion Strong Regionally restricted euxassay_006943_12
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_006943_12
TS23: cerebral cortex marginal layer Moderate Regionally restricted euxassay_006943_12
TS23: olfactory cortex marginal layer Moderate Regionally restricted euxassay_006943_12
TS23: hypothalamus Moderate Regionally restricted euxassay_006943_12
Specimen euxassay_006943_13: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: dorsal root ganglion Strong Regionally restricted euxassay_006943_13
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_006943_13
TS23: cerebral cortex marginal layer Moderate Regionally restricted euxassay_006943_13
TS23: hypothalamus Moderate Regionally restricted euxassay_006943_13
Specimen euxassay_006943_14: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: cerebral cortex marginal layer Moderate Regionally restricted euxassay_006943_14
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_006943_14
TS23: hypothalamus Moderate Regionally restricted euxassay_006943_14
Specimen euxassay_006943_15: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: cerebral cortex marginal layer Moderate Regionally restricted euxassay_006943_15
TS23: olfactory cortex marginal layer Moderate Regionally restricted euxassay_006943_15
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_006943_15
TS23: hypothalamus Moderate Regionally restricted euxassay_006943_15
TS23: medulla oblongata basal plate mantle layer Moderate Regionally restricted euxassay_006943_15 facial motor nucleus
Specimen euxassay_006943_16: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: dorsal root ganglion Strong Regionally restricted euxassay_006943_16
TS23: cerebral cortex marginal layer Moderate Regionally restricted euxassay_006943_16
TS23: olfactory cortex marginal layer Moderate Regionally restricted euxassay_006943_16
TS23: medulla oblongata basal plate mantle layer Moderate Regionally restricted euxassay_006943_16 facial motor nucleus
Specimen euxassay_006943_17: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: trigeminal ganglion Strong Regionally restricted euxassay_006943_17
TS23: vagus ganglion Strong Regionally restricted euxassay_006943_17
TS23: vestibulo-cochlear ganglion Moderate Regionally restricted euxassay_006943_17
TS23: dorsal root ganglion Strong Regionally restricted euxassay_006943_17
TS23: cerebral cortex marginal layer Moderate Regionally restricted euxassay_006943_17
TS23: olfactory cortex marginal layer Moderate Regionally restricted euxassay_006943_17
TS23: pons mantle layer Moderate Regionally restricted euxassay_006943_17 trigeminal motor nucleus
Specimen euxassay_006943_18: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: glossopharyngeal ganglion Moderate Regionally restricted euxassay_006943_18
TS23: vestibulo-cochlear ganglion Moderate Regionally restricted euxassay_006943_18
TS23: trigeminal ganglion Strong Regionally restricted euxassay_006943_18
TS23: dorsal root ganglion Strong Regionally restricted euxassay_006943_18
TS23: cerebral cortex marginal layer Moderate Regionally restricted euxassay_006943_18
TS23: olfactory cortex marginal layer Moderate Regionally restricted euxassay_006943_18
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_006943_18
Specimen euxassay_006943_19: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Strong Regionally restricted euxassay_006943_19
TS23: vestibulo-cochlear ganglion Weak Regionally restricted euxassay_006943_19
TS23: cerebral cortex marginal layer Moderate Regionally restricted euxassay_006943_19
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_006943_19
Specimen euxassay_006943_20: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_006943_20
TS23: cerebral cortex marginal layer Moderate Regionally restricted euxassay_006943_20
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_006943_20
Specimen euxassay_006943_21: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_006943_21
TS23: cerebral cortex marginal layer Moderate Regionally restricted euxassay_006943_21
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_006943_21
TS23: ovary Moderate Regionally restricted euxassay_006943_21
Specimen euxassay_006943_22: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_006943_22
TS23: cerebral cortex marginal layer Moderate Regionally restricted euxassay_006943_22
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_006943_22
TS23: ovary Moderate Regionally restricted euxassay_006943_22
Specimen euxassay_006943_23: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: cerebral cortex marginal layer Moderate Regionally restricted euxassay_006943_23
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
05/07/2024
MGI 6.23 		The Jackson Laboratory