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Gene Expression Data
Assay Details
Assay
Reference: J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
Assay type: RNA in situ
MGI Accession ID: MGI:4824899
Gene symbol: Foxc2
Gene name: forkhead box C2
Probe: T55049
Probe preparation: Antisense labelled with digoxigenin RNA
Visualized with: Alkaline phosphatase
Assay notes: Cryosections of fresh frozen material were fixed in 4% paraformaldehyde for 20 min. before further processing. A tyramide-biotin/streptavidin amplification step was included in the in situ hybridization procedure.
Results
Specimen euxassay_019498_01: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: pharyngo-tympanic tube Weak Regionally restricted euxassay_019498_01
TS23: hindlimb digit 1 phalanx Moderate Regionally restricted euxassay_019498_01
TS23: hindlimb digit 1 metatarsal Moderate Regionally restricted euxassay_019498_01
TS23: hindlimb digit 2 phalanx Moderate Regionally restricted euxassay_019498_01
TS23: hindlimb digit 2 metatarsal Moderate Regionally restricted euxassay_019498_01
TS23: hindlimb digit 3 phalanx Moderate Regionally restricted euxassay_019498_01
TS23: hindlimb digit 3 metatarsal Moderate Regionally restricted euxassay_019498_01
TS23: hindlimb digit 4 phalanx Moderate Regionally restricted euxassay_019498_01
TS23: hindlimb digit 4 metatarsal Moderate Regionally restricted euxassay_019498_01
TS23: hindlimb digit 5 metatarsal Moderate Regionally restricted euxassay_019498_01
TS23: hindlimb digit 5 phalanx Moderate Regionally restricted euxassay_019498_01
TS23: hand mesenchyme Weak Regionally restricted euxassay_019498_01
TS23: cornea Weak Regionally restricted euxassay_019498_01
Specimen euxassay_019498_02: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: pharyngo-tympanic tube Weak Regionally restricted euxassay_019498_02
TS23: hindlimb digit 5 phalanx Moderate Regionally restricted euxassay_019498_02
TS23: hindlimb digit 5 metatarsal Moderate Regionally restricted euxassay_019498_02
TS23: hindlimb digit 4 phalanx Moderate Regionally restricted euxassay_019498_02
TS23: hindlimb digit 4 metatarsal Moderate Regionally restricted euxassay_019498_02
TS23: hindlimb digit 3 metatarsal Moderate Regionally restricted euxassay_019498_02
TS23: hindlimb digit 3 phalanx Moderate Regionally restricted euxassay_019498_02
TS23: hindlimb digit 2 phalanx Weak Regionally restricted euxassay_019498_02
TS23: forelimb digit 2 phalanx Moderate Regionally restricted euxassay_019498_02
TS23: forelimb digit 1 phalanx Moderate Regionally restricted euxassay_019498_02
TS23: cornea Weak Regionally restricted euxassay_019498_02
Specimen euxassay_019498_03: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: pharyngo-tympanic tube Weak Regionally restricted euxassay_019498_03
TS23: hindlimb digit 5 metatarsal Moderate Regionally restricted euxassay_019498_03
TS23: hindlimb digit 4 metatarsal Moderate Regionally restricted euxassay_019498_03
TS23: forelimb digit 2 phalanx Moderate Regionally restricted euxassay_019498_03
TS23: forelimb digit 1 phalanx Moderate Regionally restricted euxassay_019498_03
TS23: temporal bone Weak Regionally restricted euxassay_019498_03
TS23: cornea Weak Regionally restricted euxassay_019498_03
Specimen euxassay_019498_04: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: temporal bone Weak Regionally restricted euxassay_019498_04
TS23: orbito-sphenoid Weak Regionally restricted euxassay_019498_04
TS23: cornea Weak Regionally restricted euxassay_019498_04
Specimen euxassay_019498_05: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: pharyngo-tympanic tube Weak Regionally restricted euxassay_019498_05
TS23: temporal bone Moderate Regionally restricted euxassay_019498_05
TS23: orbito-sphenoid Weak Regionally restricted euxassay_019498_05
Specimen euxassay_019498_06: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: temporal bone Moderate Regionally restricted euxassay_019498_06
Specimen euxassay_019498_07: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: exoccipital bone Moderate Regionally restricted euxassay_019498_07
TS23: temporal bone Moderate Regionally restricted euxassay_019498_07
Specimen euxassay_019498_08: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: metanephros Weak Regionally restricted euxassay_019498_08
TS23: orbito-sphenoid Weak Regionally restricted euxassay_019498_08
TS23: turbinate bone primordium Weak Regionally restricted euxassay_019498_08
Specimen euxassay_019498_09: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: metanephros Strong Regionally restricted euxassay_019498_09
TS23: turbinate bone primordium Weak Regionally restricted euxassay_019498_09
TS23: orbito-sphenoid Weak Regionally restricted euxassay_019498_09
TS23: otic capsule Moderate Regionally restricted euxassay_019498_09
TS23: pelvic girdle skeleton Weak Regionally restricted euxassay_019498_09
Specimen euxassay_019498_10: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: metanephros Strong Regionally restricted euxassay_019498_10
TS23: turbinate bone primordium Weak Regionally restricted euxassay_019498_10
TS23: otic capsule Moderate Regionally restricted euxassay_019498_10
TS23: axial skeleton tail region Weak Regionally restricted euxassay_019498_10
TS23: pelvic girdle skeleton Weak Regionally restricted euxassay_019498_10
Specimen euxassay_019498_11: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: metanephros Strong Regionally restricted euxassay_019498_11
TS23: turbinate bone primordium Weak Regionally restricted euxassay_019498_11
TS23: otic capsule Moderate Regionally restricted euxassay_019498_11
TS23: axial skeleton tail region Weak Regionally restricted euxassay_019498_11
Specimen euxassay_019498_12: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: metanephros Weak Regionally restricted euxassay_019498_12
TS23: orbito-sphenoid Weak Regionally restricted euxassay_019498_12
TS23: axial skeleton tail region Weak Regionally restricted euxassay_019498_12
TS23: nephric duct of male Weak Regionally restricted euxassay_019498_12
Specimen euxassay_019498_13: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: axial skeleton tail region Weak Regionally restricted euxassay_019498_13
Specimen euxassay_019498_15: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: nephric duct of male Weak Regionally restricted euxassay_019498_15
Specimen euxassay_019498_17: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: metanephros Strong Regionally restricted euxassay_019498_17
TS23: turbinate bone primordium Weak Regionally restricted euxassay_019498_17
TS23: otic capsule Moderate Regionally restricted euxassay_019498_17
TS23: pelvic girdle skeleton Weak Regionally restricted euxassay_019498_17
Specimen euxassay_019498_18: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: metanephros Strong Regionally restricted euxassay_019498_18
TS23: turbinate bone primordium Weak Regionally restricted euxassay_019498_18
TS23: otic capsule Moderate Regionally restricted euxassay_019498_18
TS23: pelvic girdle skeleton Weak Regionally restricted euxassay_019498_18
Specimen euxassay_019498_19: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: metanephros Strong Regionally restricted euxassay_019498_19
TS23: turbinate bone primordium Weak Regionally restricted euxassay_019498_19
TS23: orbito-sphenoid Weak Regionally restricted euxassay_019498_19
TS23: otic capsule Moderate Regionally restricted euxassay_019498_19
TS23: pelvic girdle skeleton Weak Regionally restricted euxassay_019498_19
Specimen euxassay_019498_20: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: metanephros Strong Regionally restricted euxassay_019498_20
TS23: turbinate bone primordium Weak Regionally restricted euxassay_019498_20
TS23: otic capsule Moderate Regionally restricted euxassay_019498_20
Specimen euxassay_019498_21: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: metanephros Strong Regionally restricted euxassay_019498_21
TS23: hindlimb digit 5 metatarsal Moderate Regionally restricted euxassay_019498_21
TS23: hindlimb digit 4 metatarsal Moderate Regionally restricted euxassay_019498_21
Specimen euxassay_019498_22: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: hindlimb digit 5 phalanx Moderate Regionally restricted euxassay_019498_22
TS23: hindlimb digit 5 metatarsal Moderate Regionally restricted euxassay_019498_22
TS23: hindlimb digit 4 phalanx Moderate Regionally restricted euxassay_019498_22
TS23: hindlimb digit 4 metatarsal Moderate Regionally restricted euxassay_019498_22
TS23: hindlimb digit 3 phalanx Moderate Regionally restricted euxassay_019498_22
TS23: hindlimb digit 3 metatarsal Moderate Regionally restricted euxassay_019498_22
TS23: hindlimb digit 2 phalanx Moderate Regionally restricted euxassay_019498_22
TS23: hindlimb digit 2 metatarsal Moderate Regionally restricted euxassay_019498_22
TS23: hindlimb digit 1 metatarsal Moderate Regionally restricted euxassay_019498_22
TS23: temporal bone Moderate Regionally restricted euxassay_019498_22
Specimen euxassay_019498_23: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: hindlimb digit 5 metatarsal Moderate Regionally restricted euxassay_019498_23
TS23: hindlimb digit 4 metatarsal Moderate Regionally restricted euxassay_019498_23
TS23: hindlimb digit 3 metatarsal Moderate Regionally restricted euxassay_019498_23
TS23: hindlimb digit 2 phalanx Moderate Regionally restricted euxassay_019498_23
TS23: hindlimb digit 2 metatarsal Moderate Regionally restricted euxassay_019498_23
TS23: hindlimb digit 1 metatarsal Moderate Regionally restricted euxassay_019498_23
TS23: foot mesenchyme Moderate Regionally restricted euxassay_019498_23
TS23: forelimb digit 2 phalanx Weak Regionally restricted euxassay_019498_23
TS23: forelimb digit 1 phalanx Weak Regionally restricted euxassay_019498_23
TS23: temporal bone Moderate Regionally restricted euxassay_019498_23
TS23: cornea Moderate Regionally restricted euxassay_019498_23
Specimen euxassay_019498_24: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: pharyngo-tympanic tube Weak Regionally restricted euxassay_019498_24
TS23: foot mesenchyme Weak Regionally restricted euxassay_019498_24
TS23: forelimb digit 1 phalanx Weak Regionally restricted euxassay_019498_24
TS23: forelimb digit 2 phalanx Moderate Regionally restricted euxassay_019498_24
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
05/21/2024
MGI 6.23 		The Jackson Laboratory