About   Help   FAQ
Gene Expression Data
Assay Details
Assay
Reference: J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
Assay type: RNA in situ
MGI Accession ID: MGI:4824860
Gene symbol: Fibcd1
Gene name: fibrinogen C domain containing 1
Probe: MGC clone 79204
Probe preparation: Antisense labelled with digoxigenin RNA
Visualized with: Alkaline phosphatase
Assay notes: Cryosections of fresh frozen material were fixed in 4% paraformaldehyde for 20 min. before further processing. A tyramide-biotin/streptavidin amplification step was included in the in situ hybridization procedure.
Results
Specimen euxassay_010963_01: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: liver Strong Regionally restricted euxassay_010963_01
Specimen euxassay_010963_02: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: liver Strong Regionally restricted euxassay_010963_02
Specimen euxassay_010963_03: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: liver Strong Regionally restricted euxassay_010963_03
Specimen euxassay_010963_04: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: liver Strong Regionally restricted euxassay_010963_04
Specimen euxassay_010963_05: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: liver Strong Regionally restricted euxassay_010963_05
TS23: telencephalon marginal layer Strong Regionally restricted euxassay_010963_05
TS23: midbrain mantle layer Strong Regionally restricted euxassay_010963_05
Specimen euxassay_010963_06: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: liver Strong Regionally restricted euxassay_010963_06
TS23: telencephalon marginal layer Strong Regionally restricted euxassay_010963_06
TS23: midbrain mantle layer Strong Regionally restricted euxassay_010963_06
TS23: pons mantle layer Strong Regionally restricted euxassay_010963_06
Specimen euxassay_010963_07: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: liver Strong Regionally restricted euxassay_010963_07
TS23: telencephalon marginal layer Strong Regionally restricted euxassay_010963_07
TS23: telencephalon mantle layer Strong Regionally restricted euxassay_010963_07
TS23: midbrain mantle layer Strong Regionally restricted euxassay_010963_07
TS23: midbrain marginal layer Strong Regionally restricted euxassay_010963_07
TS23: thalamus mantle layer Strong Regionally restricted euxassay_010963_07
TS23: pons mantle layer Strong Regionally restricted euxassay_010963_07
TS23: medulla oblongata alar plate mantle layer Strong Regionally restricted euxassay_010963_07
Specimen euxassay_010963_08: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: liver Strong Regionally restricted euxassay_010963_08
TS23: telencephalon mantle layer Strong Regionally restricted euxassay_010963_08
TS23: midbrain mantle layer Strong Regionally restricted euxassay_010963_08
TS23: midbrain marginal layer Strong Regionally restricted euxassay_010963_08
TS23: thalamus mantle layer Strong Regionally restricted euxassay_010963_08
TS23: medulla oblongata basal plate mantle layer Strong Regionally restricted euxassay_010963_08
TS23: medulla oblongata alar plate mantle layer Strong Regionally restricted euxassay_010963_08
Specimen euxassay_010963_09: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: liver Strong Regionally restricted euxassay_010963_09
TS23: renal cortex Strong Regionally restricted euxassay_010963_09
TS23: midbrain mantle layer Strong Regionally restricted euxassay_010963_09
TS23: midbrain marginal layer Strong Regionally restricted euxassay_010963_09
TS23: diencephalon lateral wall mantle layer Moderate Regionally restricted euxassay_010963_09
TS23: medulla oblongata basal plate mantle layer Strong Regionally restricted euxassay_010963_09
TS23: spinal cord mantle layer Strong Regionally restricted euxassay_010963_09
Specimen euxassay_010963_10: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: liver Strong Regionally restricted euxassay_010963_10
TS23: renal cortex Strong Regionally restricted euxassay_010963_10
TS23: telencephalon marginal layer Strong Regionally restricted euxassay_010963_10
TS23: midbrain mantle layer Strong Regionally restricted euxassay_010963_10
TS23: midbrain marginal layer Strong Regionally restricted euxassay_010963_10
TS23: diencephalon lateral wall mantle layer Moderate Regionally restricted euxassay_010963_10
TS23: medulla oblongata alar plate mantle layer Strong Regionally restricted euxassay_010963_10
TS23: medulla oblongata basal plate mantle layer Strong Regionally restricted euxassay_010963_10
TS23: spinal cord mantle layer Strong Regionally restricted euxassay_010963_10
Specimen euxassay_010963_11: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: liver Strong Regionally restricted euxassay_010963_11
TS23: renal cortex Strong Regionally restricted euxassay_010963_11
TS23: thymus primordium Strong Regionally restricted euxassay_010963_11
TS23: telencephalon marginal layer Strong Regionally restricted euxassay_010963_11
TS23: midbrain mantle layer Strong Regionally restricted euxassay_010963_11
TS23: midbrain marginal layer Strong Regionally restricted euxassay_010963_11
TS23: diencephalon lateral wall mantle layer Strong Regionally restricted euxassay_010963_11
TS23: medulla oblongata alar plate mantle layer Strong Regionally restricted euxassay_010963_11
TS23: medulla oblongata basal plate mantle layer Strong Regionally restricted euxassay_010963_11
TS23: spinal cord mantle layer Strong Regionally restricted euxassay_010963_11
Specimen euxassay_010963_12: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: liver Strong Regionally restricted euxassay_010963_12
TS23: renal cortex Strong Regionally restricted euxassay_010963_12
TS23: thymus primordium Strong Regionally restricted euxassay_010963_12
TS23: telencephalon marginal layer Strong Regionally restricted euxassay_010963_12
TS23: midbrain ventricular layer Strong Regionally restricted euxassay_010963_12
TS23: diencephalon lateral wall mantle layer Strong Regionally restricted euxassay_010963_12
TS23: thalamus mantle layer Strong Regionally restricted euxassay_010963_12
TS23: medulla oblongata alar plate mantle layer Strong Regionally restricted euxassay_010963_12
TS23: spinal cord mantle layer Strong Regionally restricted euxassay_010963_12
Specimen euxassay_010963_13: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: liver Strong Regionally restricted euxassay_010963_13
TS23: thymus primordium Strong Regionally restricted euxassay_010963_13
TS23: telencephalon marginal layer Strong Regionally restricted euxassay_010963_13
TS23: midbrain ventricular layer Strong Regionally restricted euxassay_010963_13
TS23: midbrain marginal layer Strong Regionally restricted euxassay_010963_13
TS23: diencephalon lateral wall ventricular layer Strong Regionally restricted euxassay_010963_13
TS23: medulla oblongata alar plate mantle layer Strong Regionally restricted euxassay_010963_13
TS23: spinal cord mantle layer Strong Regionally restricted euxassay_010963_13
Specimen euxassay_010963_14: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: liver Strong Regionally restricted euxassay_010963_14
TS23: thymus primordium Strong Regionally restricted euxassay_010963_14
TS23: midbrain marginal layer Strong Regionally restricted euxassay_010963_14
TS23: midbrain mantle layer Strong Regionally restricted euxassay_010963_14
TS23: thalamus mantle layer Strong Regionally restricted euxassay_010963_14
TS23: medulla oblongata alar plate mantle layer Strong Regionally restricted euxassay_010963_14
TS23: spinal cord mantle layer Strong Regionally restricted euxassay_010963_14
Specimen euxassay_010963_15: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: liver Strong Regionally restricted euxassay_010963_15
TS23: thymus primordium Strong Regionally restricted euxassay_010963_15
TS23: telencephalon marginal layer Strong Regionally restricted euxassay_010963_15
TS23: telencephalon mantle layer Strong Regionally restricted euxassay_010963_15
TS23: midbrain mantle layer Strong Regionally restricted euxassay_010963_15
TS23: midbrain marginal layer Strong Regionally restricted euxassay_010963_15
TS23: thalamus mantle layer Strong Regionally restricted euxassay_010963_15
TS23: diencephalon lateral wall mantle layer Strong Regionally restricted euxassay_010963_15
TS23: medulla oblongata basal plate mantle layer Strong Regionally restricted euxassay_010963_15
TS23: spinal cord mantle layer Strong Regionally restricted euxassay_010963_15
Specimen euxassay_010963_16: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: liver Strong Regionally restricted euxassay_010963_16
TS23: thymus primordium Strong Regionally restricted euxassay_010963_16
TS23: telencephalon marginal layer Strong Regionally restricted euxassay_010963_16
TS23: telencephalon mantle layer Strong Regionally restricted euxassay_010963_16
TS23: midbrain mantle layer Strong Regionally restricted euxassay_010963_16
TS23: midbrain marginal layer Strong Regionally restricted euxassay_010963_16
TS23: diencephalon lateral wall mantle layer Strong Regionally restricted euxassay_010963_16
TS23: medulla oblongata basal plate mantle layer Moderate Regionally restricted euxassay_010963_16
TS23: spinal cord mantle layer Strong Regionally restricted euxassay_010963_16
Specimen euxassay_010963_17: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: liver Strong Regionally restricted euxassay_010963_17
TS23: telencephalon marginal layer Strong Regionally restricted euxassay_010963_17
TS23: telencephalon mantle layer Strong Regionally restricted euxassay_010963_17
TS23: midbrain marginal layer Strong Regionally restricted euxassay_010963_17
TS23: midbrain mantle layer Strong Regionally restricted euxassay_010963_17
TS23: diencephalon lateral wall mantle layer Strong Regionally restricted euxassay_010963_17
TS23: spinal cord mantle layer Strong Regionally restricted euxassay_010963_17
Specimen euxassay_010963_18: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: liver Strong Regionally restricted euxassay_010963_18
TS23: renal cortex Strong Regionally restricted euxassay_010963_18
TS23: telencephalon marginal layer Strong Regionally restricted euxassay_010963_18
TS23: telencephalon mantle layer Strong Regionally restricted euxassay_010963_18
TS23: midbrain marginal layer Strong Regionally restricted euxassay_010963_18
TS23: midbrain mantle layer Strong Regionally restricted euxassay_010963_18
TS23: thalamus mantle layer Strong Regionally restricted euxassay_010963_18
TS23: diencephalon lateral wall mantle layer Strong Regionally restricted euxassay_010963_18
TS23: pons mantle layer Strong Regionally restricted euxassay_010963_18
Specimen euxassay_010963_19: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: liver Strong Regionally restricted euxassay_010963_19
TS23: renal cortex Strong Regionally restricted euxassay_010963_19
TS23: telencephalon marginal layer Strong Regionally restricted euxassay_010963_19
TS23: telencephalon mantle layer Strong Regionally restricted euxassay_010963_19
TS23: midbrain mantle layer Strong Regionally restricted euxassay_010963_19
TS23: pons mantle layer Strong Regionally restricted euxassay_010963_19
Specimen euxassay_010963_20: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: liver Strong Regionally restricted euxassay_010963_20
TS23: renal cortex Strong Regionally restricted euxassay_010963_20
TS23: telencephalon marginal layer Strong Regionally restricted euxassay_010963_20
TS23: telencephalon mantle layer Strong Regionally restricted euxassay_010963_20
Specimen euxassay_010963_21: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: liver Strong Regionally restricted euxassay_010963_21
TS23: renal cortex Strong Regionally restricted euxassay_010963_21
TS23: telencephalon marginal layer Strong Regionally restricted euxassay_010963_21
TS23: telencephalon mantle layer Strong Regionally restricted euxassay_010963_21
Specimen euxassay_010963_22: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: liver Strong Regionally restricted euxassay_010963_22
TS23: renal cortex Strong Regionally restricted euxassay_010963_22
Specimen euxassay_010963_23: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: liver Strong Regionally restricted euxassay_010963_23
Specimen euxassay_010963_24: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: liver Strong Regionally restricted euxassay_010963_24
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
Warranty Disclaimer, Privacy Notice, Licensing, & Copyright
Send questions and comments to User Support. 		last database update
05/07/2024
MGI 6.23 		The Jackson Laboratory