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Gene Expression Data
Assay Details
Assay
Reference: J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
Assay type: RNA in situ
MGI Accession ID: MGI:4824547
Gene symbol: Emx1
Gene name: empty spiracles homeobox 1
Probe: T55040
Probe preparation: Antisense labelled with digoxigenin RNA
Visualized with: Alkaline phosphatase
Assay notes: Cryosections of fresh frozen material were fixed in 4% paraformaldehyde for 20 min. before further processing. A tyramide-biotin/streptavidin amplification step was included in the in situ hybridization procedure.
Results
Specimen euxassay_019478_01: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: cerebral cortex ventricular layer Weak Uniform euxassay_019478_01

Specimen euxassay_019478_02: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: cerebral cortex ventricular layer Moderate Uniform euxassay_019478_02

Specimen euxassay_019478_03: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: cerebral cortex ventricular layer Moderate Uniform euxassay_019478_03

Specimen euxassay_019478_04: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: cerebral cortex ventricular layer Moderate Uniform euxassay_019478_04

Specimen euxassay_019478_05: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: cerebral cortex ventricular layer Moderate Uniform euxassay_019478_05

Specimen euxassay_019478_06: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: cerebral cortex ventricular layer Moderate Uniform euxassay_019478_06

Specimen euxassay_019478_07: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: cerebral cortex ventricular layer Moderate Uniform euxassay_019478_07
TS23: midbrain mantle layer Weak Single cells euxassay_019478_07
TS23: metanephros Weak Regionally restricted euxassay_019478_07

Specimen euxassay_019478_08: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: cerebral cortex ventricular layer Weak Uniform euxassay_019478_08
TS23: midbrain mantle layer Weak Single cells euxassay_019478_08

Specimen euxassay_019478_09: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: cerebral cortex ventricular layer Weak Uniform euxassay_019478_09

Specimen euxassay_019478_10: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: cerebral cortex ventricular layer Weak Uniform euxassay_019478_10

Specimen euxassay_019478_11: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: cerebral cortex ventricular layer Moderate Uniform euxassay_019478_11
TS23: olfactory cortex mantle layer Moderate Uniform euxassay_019478_11
TS23: diencephalon lateral wall mantle layer Weak Single cells euxassay_019478_11 basal plate of prosomere 1

Specimen euxassay_019478_12: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: olfactory cortex mantle layer Moderate Uniform euxassay_019478_12
TS23: cerebral cortex ventricular layer Moderate Uniform euxassay_019478_12

Specimen euxassay_019478_13: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: diencephalon lateral wall mantle layer Weak Single cells euxassay_019478_13 basal plate of prosomere 1

Specimen euxassay_019478_14: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: cerebral cortex ventricular layer Moderate Uniform euxassay_019478_14
TS23: diencephalon lateral wall mantle layer Weak Single cells euxassay_019478_14 basal plate of prosomere 1

Specimen euxassay_019478_15: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: olfactory cortex mantle layer Moderate Uniform euxassay_019478_15
TS23: cerebral cortex ventricular layer Moderate Uniform euxassay_019478_15
TS23: midbrain mantle layer Weak Single cells euxassay_019478_15

Specimen euxassay_019478_16: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: cerebral cortex ventricular layer Moderate Uniform euxassay_019478_16
TS23: olfactory cortex mantle layer Moderate Uniform euxassay_019478_16
TS23: midbrain mantle layer Weak Single cells euxassay_019478_16

Specimen euxassay_019478_17: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: olfactory cortex mantle layer Moderate Uniform euxassay_019478_17
TS23: cerebral cortex ventricular layer Moderate Uniform euxassay_019478_17

Specimen euxassay_019478_18: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: olfactory cortex mantle layer Moderate Uniform euxassay_019478_18
TS23: cerebral cortex ventricular layer Moderate Uniform euxassay_019478_18

Specimen euxassay_019478_19: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: cerebral cortex ventricular layer Moderate Uniform euxassay_019478_19

Specimen euxassay_019478_20: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: cerebral cortex ventricular layer Moderate Uniform euxassay_019478_20
TS23: metanephros Weak Regionally restricted euxassay_019478_20

Specimen euxassay_019478_21: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: cerebral cortex ventricular layer Moderate Uniform euxassay_019478_21
TS23: metanephros Weak Regionally restricted euxassay_019478_21

Specimen euxassay_019478_22: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: cerebral cortex ventricular layer Moderate Uniform euxassay_019478_22

Specimen euxassay_019478_23: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: cerebral cortex ventricular layer Weak Uniform euxassay_019478_23


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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last database update
05/14/2024
MGI 6.23
The Jackson Laboratory