About   Help   FAQ
Gene Expression Data
Assay Details
Assay
Reference: J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
Assay type: RNA in situ
MGI Accession ID: MGI:4824482
Gene symbol: Efhc1
Gene name: EF-hand domain (C-terminal) containing 1
Probe: T37698
Probe preparation: Antisense labelled with digoxigenin RNA
Visualized with: Alkaline phosphatase
Assay notes: Cryosections of fresh frozen material were fixed in 4% paraformaldehyde for 20 min. before further processing. A tyramide-biotin/streptavidin amplification step was included in the in situ hybridization procedure.
Results
Specimen euxassay_011763_03: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: metencephalon part of 4th ventricle choroid plexus Weak Regionally restricted euxassay_011763_03
TS23: medulla oblongata part of 4th ventricle choroid plexus Weak Regionally restricted euxassay_011763_03
Specimen euxassay_011763_04: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: metencephalon part of 4th ventricle choroid plexus Weak Regionally restricted euxassay_011763_04
TS23: medulla oblongata part of 4th ventricle choroid plexus Weak Regionally restricted euxassay_011763_04
Specimen euxassay_011763_05: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: metencephalon part of 4th ventricle choroid plexus Weak Regionally restricted euxassay_011763_05
TS23: medulla oblongata part of 4th ventricle choroid plexus Weak Regionally restricted euxassay_011763_05
TS23: choroid invagination Weak Regionally restricted euxassay_011763_05
Specimen euxassay_011763_06: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: metencephalon part of 4th ventricle choroid plexus Weak Regionally restricted euxassay_011763_06
TS23: medulla oblongata part of 4th ventricle choroid plexus Weak Regionally restricted euxassay_011763_06
TS23: choroid invagination Weak Regionally restricted euxassay_011763_06
Specimen euxassay_011763_07: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: metencephalon part of 4th ventricle choroid plexus Weak Regionally restricted euxassay_011763_07
TS23: medulla oblongata part of 4th ventricle choroid plexus Weak Regionally restricted euxassay_011763_07
TS23: choroid invagination Weak Regionally restricted euxassay_011763_07
Specimen euxassay_011763_08: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: metencephalon part of 4th ventricle choroid plexus Weak Regionally restricted euxassay_011763_08
TS23: medulla oblongata part of 4th ventricle choroid plexus Weak Regionally restricted euxassay_011763_08
TS23: choroid invagination Weak Regionally restricted euxassay_011763_08
Specimen euxassay_011763_09: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: metencephalon part of 4th ventricle choroid plexus Weak Regionally restricted euxassay_011763_09
TS23: medulla oblongata part of 4th ventricle choroid plexus Weak Regionally restricted euxassay_011763_09
TS23: choroid invagination Weak Regionally restricted euxassay_011763_09
Specimen euxassay_011763_10: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: metencephalon part of 4th ventricle choroid plexus Weak Regionally restricted euxassay_011763_10
TS23: medulla oblongata part of 4th ventricle choroid plexus Weak Regionally restricted euxassay_011763_10
TS23: choroid invagination Weak Regionally restricted euxassay_011763_10
TS23: olfactory epithelium Moderate Regionally restricted euxassay_011763_10
Specimen euxassay_011763_11: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: metencephalon part of 4th ventricle choroid plexus Weak Regionally restricted euxassay_011763_11
TS23: medulla oblongata part of 4th ventricle choroid plexus Weak Regionally restricted euxassay_011763_11
TS23: choroid invagination Weak Regionally restricted euxassay_011763_11
TS23: olfactory epithelium Strong Regionally restricted euxassay_011763_11
Specimen euxassay_011763_12: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: diencephalon roof plate Weak Regionally restricted euxassay_011763_12
TS23: metencephalon part of 4th ventricle choroid plexus Weak Regionally restricted euxassay_011763_12
TS23: medulla oblongata part of 4th ventricle choroid plexus Weak Regionally restricted euxassay_011763_12
TS23: olfactory epithelium Strong Regionally restricted euxassay_011763_12
Specimen euxassay_011763_13: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: metencephalon part of 4th ventricle choroid plexus Weak Regionally restricted euxassay_011763_13
TS23: medulla oblongata part of 4th ventricle choroid plexus Weak Regionally restricted euxassay_011763_13
TS23: diencephalon roof plate Weak Regionally restricted euxassay_011763_13
TS23: olfactory epithelium Strong Regionally restricted euxassay_011763_13
TS23: pharynx epithelium Moderate Regionally restricted euxassay_011763_13
Specimen euxassay_011763_14: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: metencephalon part of 4th ventricle choroid plexus Weak Regionally restricted euxassay_011763_14
TS23: medulla oblongata part of 4th ventricle choroid plexus Weak Regionally restricted euxassay_011763_14
TS23: olfactory epithelium Moderate Regionally restricted euxassay_011763_14
TS23: pharynx epithelium Moderate Regionally restricted euxassay_011763_14
Specimen euxassay_011763_15: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: metencephalon part of 4th ventricle choroid plexus Weak Regionally restricted euxassay_011763_15
TS23: medulla oblongata part of 4th ventricle choroid plexus Weak Regionally restricted euxassay_011763_15
TS23: choroid invagination Weak Regionally restricted euxassay_011763_15
TS23: olfactory epithelium Moderate Regionally restricted euxassay_011763_15
TS23: pharynx epithelium Moderate Regionally restricted euxassay_011763_15
Specimen euxassay_011763_16: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: metencephalon part of 4th ventricle choroid plexus Weak Regionally restricted euxassay_011763_16
TS23: medulla oblongata part of 4th ventricle choroid plexus Weak Regionally restricted euxassay_011763_16
TS23: choroid invagination Weak Regionally restricted euxassay_011763_16
TS23: olfactory epithelium Strong Regionally restricted euxassay_011763_16
Specimen euxassay_011763_17: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: medulla oblongata part of 4th ventricle choroid plexus Weak Regionally restricted euxassay_011763_17
TS23: metencephalon part of 4th ventricle choroid plexus Weak Regionally restricted euxassay_011763_17
TS23: choroid invagination Weak Regionally restricted euxassay_011763_17
TS23: olfactory epithelium Strong Regionally restricted euxassay_011763_17
Specimen euxassay_011763_18: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: metencephalon part of 4th ventricle choroid plexus Weak Regionally restricted euxassay_011763_18
TS23: medulla oblongata part of 4th ventricle choroid plexus Weak Regionally restricted euxassay_011763_18
TS23: choroid invagination Weak Regionally restricted euxassay_011763_18
TS23: olfactory epithelium Strong Regionally restricted euxassay_011763_18
Specimen euxassay_011763_19: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: metencephalon part of 4th ventricle choroid plexus Weak Regionally restricted euxassay_011763_19
TS23: medulla oblongata part of 4th ventricle choroid plexus Weak Regionally restricted euxassay_011763_19
TS23: olfactory epithelium Strong Regionally restricted euxassay_011763_19
Specimen euxassay_011763_20: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: metencephalon part of 4th ventricle choroid plexus Weak Regionally restricted euxassay_011763_20
TS23: medulla oblongata part of 4th ventricle choroid plexus Weak Regionally restricted euxassay_011763_20
TS23: olfactory epithelium Strong Regionally restricted euxassay_011763_20
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
Warranty Disclaimer, Privacy Notice, Licensing, & Copyright
Send questions and comments to User Support. 		last database update
05/07/2024
MGI 6.23 		The Jackson Laboratory