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Gene Expression Data
Assay Details
Assay
Reference: J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
Assay type: RNA in situ
MGI Accession ID: MGI:4824475
Gene symbol: Ednrb
Gene name: endothelin receptor type B
Probe: IMAGE clone 2099487
Probe preparation: Antisense labelled with digoxigenin RNA
Visualized with: Alkaline phosphatase
Assay notes: Cryosections of fresh frozen material were fixed in 4% paraformaldehyde for 20 min. before further processing. A tyramide-biotin/streptavidin amplification step was included in the in situ hybridization procedure.
Results
Specimen euxassay_000978_01: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon ventricular layer Strong Uniform euxassay_000978_01
TS23: embryo mesenchyme Moderate Regionally restricted euxassay_000978_01
Specimen euxassay_000978_02: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: telencephalon ventricular layer Strong Uniform euxassay_000978_02
TS23: stomach Moderate Regionally restricted euxassay_000978_02 smooth muscle
TS23: smooth muscle tissue Present euxassay_000978_02
TS23: embryo mesenchyme Moderate Regionally restricted euxassay_000978_02
Specimen euxassay_000978_03: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon ventricular layer Strong Uniform euxassay_000978_03
TS23: embryo mesenchyme Moderate Regionally restricted euxassay_000978_03
Specimen euxassay_000978_04: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: telencephalon ventricular layer Strong Uniform euxassay_000978_04
TS23: metencephalon rest of alar plate ventricular layer Strong Uniform euxassay_000978_04
TS23: trigeminal ganglion Strong Uniform euxassay_000978_04
TS23: stomach Moderate Regionally restricted euxassay_000978_04 smooth muscle
TS23: smooth muscle tissue Present euxassay_000978_04
TS23: embryo mesenchyme Moderate Regionally restricted euxassay_000978_04
Specimen euxassay_000978_05: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: telencephalon ventricular layer Strong Uniform euxassay_000978_05
TS23: metencephalon rest of alar plate ventricular layer Strong Uniform euxassay_000978_05
TS23: trigeminal ganglion Strong Uniform euxassay_000978_05
TS23: facial ganglion Strong Uniform euxassay_000978_05
TS23: vestibular ganglion Strong Uniform euxassay_000978_05
TS23: stomach Moderate Regionally restricted euxassay_000978_05 smooth muscle
TS23: smooth muscle tissue Present euxassay_000978_05
TS23: embryo mesenchyme Moderate Regionally restricted euxassay_000978_05
Specimen euxassay_000978_06: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: telencephalon ventricular layer Strong Uniform euxassay_000978_06
TS23: pons ventricular layer Strong Uniform euxassay_000978_06
TS23: metencephalon rest of alar plate ventricular layer Strong Uniform euxassay_000978_06
TS23: trigeminal ganglion Strong Uniform euxassay_000978_06
TS23: facial ganglion Strong Uniform euxassay_000978_06
TS23: vestibular ganglion Strong Uniform euxassay_000978_06
TS23: stomach Moderate Regionally restricted euxassay_000978_06 smooth muscle
TS23: smooth muscle tissue Present euxassay_000978_06
TS23: embryo mesenchyme Moderate Regionally restricted euxassay_000978_06
Specimen euxassay_000978_07: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: telencephalon ventricular layer Strong Uniform euxassay_000978_07
TS23: pons ventricular layer Strong Uniform euxassay_000978_07
TS23: metencephalon rest of alar plate ventricular layer Strong Uniform euxassay_000978_07
TS23: cochlear ganglion Strong Uniform euxassay_000978_07
TS23: vestibular ganglion Strong Uniform euxassay_000978_07
TS23: trigeminal ganglion Strong Uniform euxassay_000978_07
TS23: facial ganglion Strong Uniform euxassay_000978_07
TS23: stomach Moderate Regionally restricted euxassay_000978_07 smooth muscle
TS23: smooth muscle tissue Present euxassay_000978_07
TS23: embryo mesenchyme Moderate Regionally restricted euxassay_000978_07
Specimen euxassay_000978_08: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: telencephalon ventricular layer Strong Uniform euxassay_000978_08
TS23: metencephalon rest of alar plate ventricular layer Strong Uniform euxassay_000978_08
TS23: pons ventricular layer Strong Uniform euxassay_000978_08
TS23: stomach Moderate Regionally restricted euxassay_000978_08 smooth muscle
TS23: smooth muscle tissue Present euxassay_000978_08
TS23: midgut Moderate Regionally restricted euxassay_000978_08 smooth muscle
TS23: embryo mesenchyme Moderate Regionally restricted euxassay_000978_08
Specimen euxassay_000978_09: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: telencephalon ventricular layer Strong Uniform euxassay_000978_09
TS23: pons ventricular layer Strong Uniform euxassay_000978_09
TS23: metencephalon rest of alar plate ventricular layer Strong Uniform euxassay_000978_09
TS23: midbrain ventricular layer Strong Uniform euxassay_000978_09
TS23: trigeminal ganglion Strong Uniform euxassay_000978_09
TS23: vestibular ganglion Strong Uniform euxassay_000978_09
TS23: inferior glossopharyngeal ganglion Strong Uniform euxassay_000978_09
TS23: superior glossopharyngeal ganglion Strong Uniform euxassay_000978_09
TS23: stomach Moderate Regionally restricted euxassay_000978_09 smooth muscle
TS23: smooth muscle tissue Present euxassay_000978_09
TS23: midgut Moderate Regionally restricted euxassay_000978_09 smooth muscle
TS23: dorsal root ganglion Moderate Regionally restricted euxassay_000978_09
TS23: embryo mesenchyme Moderate Regionally restricted euxassay_000978_09
Specimen euxassay_000978_10: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: telencephalon ventricular layer Strong Uniform euxassay_000978_10
TS23: olfactory cortex ventricular layer Strong Uniform euxassay_000978_10
TS23: pons ventricular layer Strong Uniform euxassay_000978_10
TS23: medulla oblongata basal plate ventricular layer Strong Uniform euxassay_000978_10
TS23: midbrain ventricular layer Strong Uniform euxassay_000978_10
TS23: trigeminal ganglion Strong Uniform euxassay_000978_10
TS23: stomach Moderate Regionally restricted euxassay_000978_10 smooth muscle
TS23: smooth muscle tissue Present euxassay_000978_10
TS23: midgut Moderate Regionally restricted euxassay_000978_10 smooth muscle
TS23: dorsal root ganglion Moderate Regionally restricted euxassay_000978_10
TS23: embryo mesenchyme Moderate Regionally restricted euxassay_000978_10
Specimen euxassay_000978_11: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: olfactory cortex ventricular layer Strong Uniform euxassay_000978_11
TS23: telencephalon ventricular layer Strong Uniform euxassay_000978_11
TS23: medulla oblongata alar plate ventricular layer Strong Uniform euxassay_000978_11
TS23: medulla oblongata basal plate ventricular layer Strong Uniform euxassay_000978_11
TS23: pons ventricular layer Strong Uniform euxassay_000978_11
TS23: midbrain ventricular layer Strong Uniform euxassay_000978_11
TS23: diencephalon lateral wall ventricular layer Strong Uniform euxassay_000978_11
TS23: midgut Moderate Regionally restricted euxassay_000978_11 smooth muscle
TS23: stomach Moderate Regionally restricted euxassay_000978_11 smooth muscle
TS23: smooth muscle tissue Present euxassay_000978_11
TS23: dorsal root ganglion Moderate Regionally restricted euxassay_000978_11
TS23: tongue intrinsic muscle Moderate Regionally restricted euxassay_000978_11
TS23: embryo mesenchyme Moderate Regionally restricted euxassay_000978_11
Specimen euxassay_000978_12: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: olfactory cortex ventricular layer Strong Uniform euxassay_000978_12
TS23: telencephalon ventricular layer Strong Uniform euxassay_000978_12
TS23: pons ventricular layer Strong Uniform euxassay_000978_12
TS23: medulla oblongata basal plate ventricular layer Strong Uniform euxassay_000978_12
TS23: medulla oblongata alar plate ventricular layer Strong Uniform euxassay_000978_12
TS23: midbrain ventricular layer Strong Uniform euxassay_000978_12
TS23: diencephalon lateral wall ventricular layer Strong Uniform euxassay_000978_12
TS23: foregut-midgut junction Moderate Regionally restricted euxassay_000978_12 smooth muscle
TS23: smooth muscle tissue Present euxassay_000978_12
TS23: midgut Moderate Regionally restricted euxassay_000978_12 smooth muscle
TS23: dorsal root ganglion Moderate Regionally restricted euxassay_000978_12
TS23: tongue intrinsic muscle Moderate Regionally restricted euxassay_000978_12
TS23: embryo mesenchyme Moderate Regionally restricted euxassay_000978_12
Specimen euxassay_000978_13: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: telencephalon ventricular layer Strong Uniform euxassay_000978_13
TS23: pons ventricular layer Strong Uniform euxassay_000978_13
TS23: medulla oblongata basal plate ventricular layer Strong Uniform euxassay_000978_13
TS23: medulla oblongata alar plate ventricular layer Strong Uniform euxassay_000978_13
TS23: midbrain ventricular layer Strong Uniform euxassay_000978_13
TS23: diencephalon lateral wall ventricular layer Strong Uniform euxassay_000978_13
TS23: midgut Moderate Regionally restricted euxassay_000978_13 smooth muscle
TS23: foregut-midgut junction Moderate Regionally restricted euxassay_000978_13 smooth muscle
TS23: smooth muscle tissue Present euxassay_000978_13
TS23: ventral grey horn Strong Regionally restricted euxassay_000978_13
TS23: tongue intrinsic muscle Moderate Regionally restricted euxassay_000978_13
TS23: esophagus Moderate Regionally restricted euxassay_000978_13
TS23: urethra Strong Uniform euxassay_000978_13 Originally this result was annotated to a male-specific term, but as the specimen was not sexed, it is likely the data annotator intended to use a non-gender specific term.
TS23: bladder Moderate Regionally restricted euxassay_000978_13
TS23: embryo mesenchyme Moderate Regionally restricted euxassay_000978_13
Specimen euxassay_000978_14: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: telencephalon ventricular layer Strong Uniform euxassay_000978_14
TS23: medulla oblongata basal plate ventricular layer Strong Uniform euxassay_000978_14
TS23: pons ventricular layer Strong Uniform euxassay_000978_14
TS23: midbrain ventricular layer Strong Uniform euxassay_000978_14
TS23: midgut Moderate Regionally restricted euxassay_000978_14 smooth muscle
TS23: foregut-midgut junction Moderate Regionally restricted euxassay_000978_14 smooth muscle
TS23: smooth muscle tissue Present euxassay_000978_14
TS23: ventral grey horn Strong Regionally restricted euxassay_000978_14
TS23: tongue intrinsic muscle Moderate Regionally restricted euxassay_000978_14
TS23: esophagus Moderate Regionally restricted euxassay_000978_14
TS23: urethra Strong Uniform euxassay_000978_14 Originally this result was annotated to a male-specific term, but as the specimen was not sexed, it is likely the data annotator intended to use a non-gender specific term.
TS23: bladder Moderate Regionally restricted euxassay_000978_14
TS23: embryo mesenchyme Moderate Regionally restricted euxassay_000978_14
Specimen euxassay_000978_15: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: olfactory cortex ventricular layer Strong Uniform euxassay_000978_15
TS23: telencephalon ventricular layer Strong Uniform euxassay_000978_15
TS23: medulla oblongata basal plate ventricular layer Strong Uniform euxassay_000978_15
TS23: metencephalon rest of alar plate ventricular layer Strong Uniform euxassay_000978_15
TS23: pons ventricular layer Strong Uniform euxassay_000978_15
TS23: midbrain ventricular layer Strong Uniform euxassay_000978_15
TS23: midgut Moderate Regionally restricted euxassay_000978_15 smooth muscle
TS23: foregut-midgut junction Moderate Regionally restricted euxassay_000978_15 smooth muscle
TS23: smooth muscle tissue Present euxassay_000978_15
TS23: ventral grey horn Strong Regionally restricted euxassay_000978_15
TS23: dorsal root ganglion Strong Regionally restricted euxassay_000978_15
TS23: tongue intrinsic muscle Moderate Regionally restricted euxassay_000978_15
TS23: embryo mesenchyme Moderate Regionally restricted euxassay_000978_15
Specimen euxassay_000978_16: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: olfactory cortex ventricular layer Strong Uniform euxassay_000978_16
TS23: telencephalon ventricular layer Strong Uniform euxassay_000978_16
TS23: metencephalon rest of alar plate ventricular layer Strong Uniform euxassay_000978_16
TS23: medulla oblongata basal plate ventricular layer Strong Uniform euxassay_000978_16
TS23: pons ventricular layer Strong Uniform euxassay_000978_16
TS23: midbrain ventricular layer Strong Uniform euxassay_000978_16
TS23: midgut Moderate Regionally restricted euxassay_000978_16 smooth muscle
TS23: foregut-midgut junction Moderate Regionally restricted euxassay_000978_16 smooth muscle
TS23: smooth muscle tissue Present euxassay_000978_16
TS23: ventral grey horn Moderate Regionally restricted euxassay_000978_16
TS23: dorsal root ganglion Strong Regionally restricted euxassay_000978_16
TS23: tongue intrinsic muscle Moderate Regionally restricted euxassay_000978_16
TS23: embryo mesenchyme Moderate Regionally restricted euxassay_000978_16
Specimen euxassay_000978_17: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: olfactory cortex ventricular layer Strong Uniform euxassay_000978_17
TS23: telencephalon ventricular layer Strong Uniform euxassay_000978_17
TS23: metencephalon rest of alar plate ventricular layer Strong Uniform euxassay_000978_17
TS23: pons ventricular layer Strong Uniform euxassay_000978_17
TS23: midbrain ventricular layer Strong Uniform euxassay_000978_17
TS23: trigeminal ganglion Strong Uniform euxassay_000978_17
TS23: midgut Moderate Regionally restricted euxassay_000978_17 smooth muscle
TS23: smooth muscle tissue Present euxassay_000978_17
TS23: ventral grey horn Moderate Regionally restricted euxassay_000978_17
TS23: dorsal root ganglion Strong Regionally restricted euxassay_000978_17
TS23: tongue intrinsic muscle Moderate Regionally restricted euxassay_000978_17
TS23: embryo mesenchyme Moderate Regionally restricted euxassay_000978_17
Specimen euxassay_000978_18: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: telencephalon ventricular layer Strong Uniform euxassay_000978_18
TS23: metencephalon rest of alar plate ventricular layer Strong Uniform euxassay_000978_18
TS23: pons ventricular layer Strong Uniform euxassay_000978_18
TS23: superior glossopharyngeal ganglion Strong Uniform euxassay_000978_18
TS23: vestibular ganglion Strong Uniform euxassay_000978_18
TS23: trigeminal ganglion Strong Uniform euxassay_000978_18
TS23: midgut Moderate Regionally restricted euxassay_000978_18 smooth muscle
TS23: smooth muscle tissue Present euxassay_000978_18
TS23: dorsal root ganglion Strong Regionally restricted euxassay_000978_18
TS23: embryo mesenchyme Moderate Regionally restricted euxassay_000978_18
Specimen euxassay_000978_19: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon ventricular layer Strong Uniform euxassay_000978_19
TS23: metencephalon rest of alar plate ventricular layer Strong Uniform euxassay_000978_19
TS23: dorsal root ganglion Strong Regionally restricted euxassay_000978_19
TS23: embryo mesenchyme Moderate Regionally restricted euxassay_000978_19
Specimen euxassay_000978_20: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: telencephalon ventricular layer Strong Uniform euxassay_000978_20
TS23: metencephalon rest of alar plate ventricular layer Strong Uniform euxassay_000978_20
TS23: trigeminal ganglion Strong Uniform euxassay_000978_20
TS23: facial ganglion Strong Uniform euxassay_000978_20
TS23: vestibular ganglion Strong Uniform euxassay_000978_20
TS23: cochlear ganglion Strong Uniform euxassay_000978_20
TS23: inferior glossopharyngeal ganglion Strong Uniform euxassay_000978_20
TS23: midgut Moderate Regionally restricted euxassay_000978_20 smooth muscle
TS23: smooth muscle tissue Present euxassay_000978_20
TS23: embryo mesenchyme Moderate Regionally restricted euxassay_000978_20
Specimen euxassay_000978_21: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon ventricular layer Strong Uniform euxassay_000978_21
TS23: metencephalon rest of alar plate ventricular layer Strong Uniform euxassay_000978_21
TS23: trigeminal ganglion Strong Uniform euxassay_000978_21
TS23: facial ganglion Strong Uniform euxassay_000978_21
TS23: vestibular ganglion Strong Uniform euxassay_000978_21
TS23: embryo mesenchyme Moderate Regionally restricted euxassay_000978_21
Specimen euxassay_000978_22: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon ventricular layer Strong Uniform euxassay_000978_22
TS23: 4th ventricle Strong Uniform euxassay_000978_22
TS23: metencephalon rest of alar plate ventricular layer Strong Uniform euxassay_000978_22
TS23: trigeminal ganglion Strong Uniform euxassay_000978_22
TS23: facial ganglion Strong Uniform euxassay_000978_22
TS23: embryo mesenchyme Moderate Regionally restricted euxassay_000978_22
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
05/07/2024
MGI 6.23 		The Jackson Laboratory