About   Help   FAQ
Gene Expression Data
Assay Details
Assay
Reference: J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
Assay type: RNA in situ
MGI Accession ID: MGI:4824245
Gene symbol: Dcc
Gene name: DCC netrin 1 receptor
Probe: EH3202 probe 3133
Probe preparation: Antisense labelled with digoxigenin RNA
Visualized with: Alkaline phosphatase
Assay notes: Cryosections of fresh frozen material were fixed in 4% paraformaldehyde for 20 min. before further processing. A tyramide-biotin/streptavidin amplification step was included in the in situ hybridization procedure.
Results
Specimen euxassay_009578_01: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: neural retina Strong Regionally restricted euxassay_009578_01
TS23: telencephalon marginal layer Strong Regionally restricted euxassay_009578_01
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_009578_01
Specimen euxassay_009578_02: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: neural retina Strong Regionally restricted euxassay_009578_02
TS23: telencephalon marginal layer Strong Regionally restricted euxassay_009578_02
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_009578_02
TS23: rest of cerebellum marginal layer Strong Regionally restricted euxassay_009578_02
TS23: pons marginal layer Strong Regionally restricted euxassay_009578_02
Specimen euxassay_009578_03: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: neural retina Strong Regionally restricted euxassay_009578_03
TS23: telencephalon marginal layer Strong Regionally restricted euxassay_009578_03
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_009578_03
TS23: pons marginal layer Strong Regionally restricted euxassay_009578_03
TS23: rest of cerebellum marginal layer Strong Regionally restricted euxassay_009578_03
TS23: rest of cerebellum ventricular layer Strong Regionally restricted euxassay_009578_03
Specimen euxassay_009578_04: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: neural retina Strong Regionally restricted euxassay_009578_04
TS23: telencephalon marginal layer Strong Regionally restricted euxassay_009578_04
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_009578_04
TS23: rest of cerebellum ventricular layer Strong Regionally restricted euxassay_009578_04
TS23: rest of cerebellum marginal layer Strong Regionally restricted euxassay_009578_04
TS23: medulla oblongata alar plate marginal layer Strong Regionally restricted euxassay_009578_04
TS23: medulla oblongata basal plate marginal layer Strong Regionally restricted euxassay_009578_04
Specimen euxassay_009578_05: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: neural retina Strong Regionally restricted euxassay_009578_05
TS23: telencephalon marginal layer Strong Regionally restricted euxassay_009578_05
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_009578_05
TS23: midbrain mantle layer Strong Regionally restricted euxassay_009578_05
TS23: rest of cerebellum ventricular layer Strong Regionally restricted euxassay_009578_05
TS23: rest of cerebellum marginal layer Strong Regionally restricted euxassay_009578_05
TS23: medulla oblongata alar plate marginal layer Strong Regionally restricted euxassay_009578_05
TS23: medulla oblongata basal plate marginal layer Strong Regionally restricted euxassay_009578_05
TS23: pons mantle layer Strong Regionally restricted euxassay_009578_05
Specimen euxassay_009578_06: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon marginal layer Strong Regionally restricted euxassay_009578_06
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_009578_06
TS23: midbrain mantle layer Strong Regionally restricted euxassay_009578_06
TS23: rest of cerebellum ventricular layer Strong Regionally restricted euxassay_009578_06
TS23: rest of cerebellum marginal layer Strong Regionally restricted euxassay_009578_06
TS23: medulla oblongata alar plate marginal layer Strong Regionally restricted euxassay_009578_06
TS23: medulla oblongata basal plate marginal layer Strong Regionally restricted euxassay_009578_06
TS23: pons mantle layer Strong Regionally restricted euxassay_009578_06
Specimen euxassay_009578_07: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon marginal layer Strong Regionally restricted euxassay_009578_07
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_009578_07
TS23: midbrain mantle layer Strong Regionally restricted euxassay_009578_07
TS23: rest of cerebellum ventricular layer Strong Regionally restricted euxassay_009578_07
TS23: rest of cerebellum marginal layer Strong Regionally restricted euxassay_009578_07
TS23: medulla oblongata alar plate marginal layer Strong Regionally restricted euxassay_009578_07
TS23: medulla oblongata basal plate marginal layer Strong Regionally restricted euxassay_009578_07
TS23: medulla oblongata alar plate mantle layer Strong Single cells euxassay_009578_07
TS23: pons mantle layer Moderate Regionally restricted euxassay_009578_07
Specimen euxassay_009578_08: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon marginal layer Strong Regionally restricted euxassay_009578_08
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_009578_08
TS23: midbrain mantle layer Strong Regionally restricted euxassay_009578_08
TS23: rest of cerebellum ventricular layer Strong Regionally restricted euxassay_009578_08
TS23: rest of cerebellum marginal layer Strong Regionally restricted euxassay_009578_08
TS23: medulla oblongata alar plate marginal layer Moderate Regionally restricted euxassay_009578_08
TS23: medulla oblongata basal plate marginal layer Moderate Regionally restricted euxassay_009578_08
TS23: medulla oblongata alar plate mantle layer Moderate Single cells euxassay_009578_08
TS23: pons mantle layer Moderate Regionally restricted euxassay_009578_08
Specimen euxassay_009578_09: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon marginal layer Strong Regionally restricted euxassay_009578_09
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_009578_09
TS23: diencephalon lateral wall mantle layer Strong Regionally restricted euxassay_009578_09
TS23: midbrain mantle layer Strong Regionally restricted euxassay_009578_09
TS23: rest of cerebellum ventricular layer Strong Regionally restricted euxassay_009578_09
TS23: rest of cerebellum marginal layer Strong Regionally restricted euxassay_009578_09
TS23: medulla oblongata alar plate mantle layer Strong Single cells euxassay_009578_09
TS23: pons mantle layer Moderate Regionally restricted euxassay_009578_09
TS23: spinal cord mantle layer Strong Regionally restricted euxassay_009578_09
Specimen euxassay_009578_10: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon marginal layer Strong Regionally restricted euxassay_009578_10
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_009578_10
TS23: diencephalon lateral wall mantle layer Strong Regionally restricted euxassay_009578_10
TS23: midbrain mantle layer Strong Regionally restricted euxassay_009578_10
TS23: rest of cerebellum ventricular layer Strong Regionally restricted euxassay_009578_10
TS23: rest of cerebellum marginal layer Strong Regionally restricted euxassay_009578_10
TS23: medulla oblongata basal plate mantle layer Moderate Regionally restricted euxassay_009578_10
TS23: pons mantle layer Moderate Regionally restricted euxassay_009578_10
TS23: spinal cord mantle layer Strong Regionally restricted euxassay_009578_10
Specimen euxassay_009578_11: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon marginal layer Strong Regionally restricted euxassay_009578_11
TS23: olfactory cortex marginal layer Strong Regionally restricted euxassay_009578_11
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_009578_11
TS23: diencephalon lateral wall mantle layer Strong Regionally restricted euxassay_009578_11
TS23: midbrain mantle layer Strong Regionally restricted euxassay_009578_11
TS23: rest of cerebellum ventricular layer Strong Regionally restricted euxassay_009578_11
TS23: rest of cerebellum marginal layer Strong Regionally restricted euxassay_009578_11
TS23: medulla oblongata basal plate mantle layer Moderate Regionally restricted euxassay_009578_11
TS23: pons mantle layer Moderate Regionally restricted euxassay_009578_11
TS23: spinal cord mantle layer Strong Regionally restricted euxassay_009578_11
Specimen euxassay_009578_12: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon marginal layer Strong Regionally restricted euxassay_009578_12
TS23: olfactory cortex marginal layer Strong Regionally restricted euxassay_009578_12
TS23: telencephalon mantle layer Strong Regionally restricted euxassay_009578_12
TS23: diencephalon lateral wall mantle layer Strong Regionally restricted euxassay_009578_12
TS23: midbrain mantle layer Strong Regionally restricted euxassay_009578_12
TS23: rest of cerebellum ventricular layer Strong Regionally restricted euxassay_009578_12
TS23: rest of cerebellum marginal layer Strong Regionally restricted euxassay_009578_12
TS23: medulla oblongata basal plate mantle layer Moderate Regionally restricted euxassay_009578_12
TS23: pons mantle layer Moderate Regionally restricted euxassay_009578_12
TS23: spinal cord mantle layer Strong Regionally restricted euxassay_009578_12
Specimen euxassay_009578_13: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: olfactory cortex marginal layer Strong Regionally restricted euxassay_009578_13
TS23: telencephalon marginal layer Strong Regionally restricted euxassay_009578_13
TS23: telencephalon mantle layer Strong Regionally restricted euxassay_009578_13
TS23: diencephalon lateral wall mantle layer Strong Regionally restricted euxassay_009578_13
TS23: midbrain mantle layer Strong Regionally restricted euxassay_009578_13
TS23: rest of cerebellum ventricular layer Strong Regionally restricted euxassay_009578_13
TS23: rest of cerebellum marginal layer Strong Regionally restricted euxassay_009578_13
TS23: medulla oblongata basal plate mantle layer Moderate Regionally restricted euxassay_009578_13
TS23: medulla oblongata alar plate mantle layer Strong Single cells euxassay_009578_13
TS23: pons mantle layer Moderate Regionally restricted euxassay_009578_13
TS23: spinal cord mantle layer Strong Regionally restricted euxassay_009578_13
Specimen euxassay_009578_14: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: olfactory cortex marginal layer Strong Regionally restricted euxassay_009578_14
TS23: telencephalon marginal layer Strong Regionally restricted euxassay_009578_14
TS23: telencephalon mantle layer Strong Regionally restricted euxassay_009578_14
TS23: diencephalon lateral wall mantle layer Strong Regionally restricted euxassay_009578_14
TS23: midbrain mantle layer Strong Regionally restricted euxassay_009578_14
TS23: rest of cerebellum ventricular layer Strong Regionally restricted euxassay_009578_14
TS23: rest of cerebellum marginal layer Strong Regionally restricted euxassay_009578_14
TS23: medulla oblongata alar plate mantle layer Strong Single cells euxassay_009578_14
TS23: pons mantle layer Moderate Regionally restricted euxassay_009578_14
TS23: spinal cord mantle layer Strong Regionally restricted euxassay_009578_14
Specimen euxassay_009578_15: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon marginal layer Strong Regionally restricted euxassay_009578_15
TS23: telencephalon mantle layer Strong Regionally restricted euxassay_009578_15
TS23: diencephalon lateral wall mantle layer Strong Regionally restricted euxassay_009578_15
TS23: midbrain mantle layer Strong Regionally restricted euxassay_009578_15
TS23: rest of cerebellum ventricular layer Strong Regionally restricted euxassay_009578_15
TS23: rest of cerebellum marginal layer Strong Regionally restricted euxassay_009578_15
TS23: medulla oblongata alar plate marginal layer Strong Regionally restricted euxassay_009578_15
TS23: medulla oblongata basal plate marginal layer Strong Regionally restricted euxassay_009578_15
TS23: medulla oblongata alar plate mantle layer Strong Single cells euxassay_009578_15
TS23: pons mantle layer Moderate Regionally restricted euxassay_009578_15
TS23: spinal cord mantle layer Strong Regionally restricted euxassay_009578_15
Specimen euxassay_009578_16: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon marginal layer Strong Regionally restricted euxassay_009578_16
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_009578_16
TS23: diencephalon lateral wall mantle layer Moderate Regionally restricted euxassay_009578_16
TS23: midbrain mantle layer Strong Regionally restricted euxassay_009578_16
TS23: rest of cerebellum ventricular layer Strong Regionally restricted euxassay_009578_16
TS23: rest of cerebellum marginal layer Strong Regionally restricted euxassay_009578_16
TS23: medulla oblongata alar plate marginal layer Strong Regionally restricted euxassay_009578_16
TS23: medulla oblongata basal plate marginal layer Strong Regionally restricted euxassay_009578_16
TS23: pons mantle layer Moderate Regionally restricted euxassay_009578_16
Specimen euxassay_009578_17: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon marginal layer Strong Regionally restricted euxassay_009578_17
TS23: olfactory cortex marginal layer Strong Regionally restricted euxassay_009578_17
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_009578_17
TS23: diencephalon lateral wall mantle layer Moderate Regionally restricted euxassay_009578_17
TS23: midbrain mantle layer Strong Regionally restricted euxassay_009578_17
TS23: rest of cerebellum ventricular layer Strong Regionally restricted euxassay_009578_17
TS23: rest of cerebellum marginal layer Strong Regionally restricted euxassay_009578_17
TS23: medulla oblongata alar plate marginal layer Strong Regionally restricted euxassay_009578_17
TS23: medulla oblongata basal plate marginal layer Strong Regionally restricted euxassay_009578_17
TS23: pons mantle layer Moderate Regionally restricted euxassay_009578_17
Specimen euxassay_009578_18: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon marginal layer Strong Regionally restricted euxassay_009578_18
TS23: olfactory cortex marginal layer Strong Regionally restricted euxassay_009578_18
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_009578_18
TS23: diencephalon lateral wall mantle layer Moderate Regionally restricted euxassay_009578_18
TS23: rest of cerebellum ventricular layer Strong Regionally restricted euxassay_009578_18
TS23: rest of cerebellum marginal layer Strong Regionally restricted euxassay_009578_18
TS23: medulla oblongata basal plate marginal layer Strong Regionally restricted euxassay_009578_18
TS23: medulla oblongata alar plate marginal layer Strong Regionally restricted euxassay_009578_18
Specimen euxassay_009578_19: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon marginal layer Strong Regionally restricted euxassay_009578_19
TS23: olfactory cortex marginal layer Strong Regionally restricted euxassay_009578_19
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_009578_19
TS23: rest of cerebellum ventricular layer Strong Regionally restricted euxassay_009578_19
TS23: rest of cerebellum marginal layer Strong Regionally restricted euxassay_009578_19
TS23: pons marginal layer Strong Regionally restricted euxassay_009578_19
Specimen euxassay_009578_20: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: olfactory cortex marginal layer Strong Regionally restricted euxassay_009578_20
TS23: telencephalon marginal layer Strong Regionally restricted euxassay_009578_20
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_009578_20
TS23: rest of cerebellum ventricular layer Strong Regionally restricted euxassay_009578_20
TS23: rest of cerebellum marginal layer Strong Regionally restricted euxassay_009578_20
TS23: pons marginal layer Strong Regionally restricted euxassay_009578_20
TS23: medulla oblongata alar plate marginal layer Strong Regionally restricted euxassay_009578_20
Specimen euxassay_009578_21: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon marginal layer Strong Regionally restricted euxassay_009578_21
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_009578_21
TS23: rest of cerebellum ventricular layer Strong Regionally restricted euxassay_009578_21
TS23: rest of cerebellum marginal layer Strong Regionally restricted euxassay_009578_21
TS23: medulla oblongata alar plate marginal layer Strong Regionally restricted euxassay_009578_21
Specimen euxassay_009578_22: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon marginal layer Strong Regionally restricted euxassay_009578_22
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_009578_22
Specimen euxassay_009578_23: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon marginal layer Strong Regionally restricted euxassay_009578_23
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_009578_23
Specimen euxassay_009578_24: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: neural retina Strong Regionally restricted euxassay_009578_24
TS23: telencephalon marginal layer Strong Regionally restricted euxassay_009578_24
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_009578_24
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
Warranty Disclaimer, Privacy Notice, Licensing, & Copyright
Send questions and comments to User Support. 		last database update
05/21/2024
MGI 6.23 		The Jackson Laboratory