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Gene Expression Data
Assay Details
Assay
Reference: J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
Assay type: RNA in situ
MGI Accession ID: MGI:4824197
Gene symbol: Arhgap39
Gene name: Rho GTPase activating protein 39
Probe: MGC clone 79179
Probe preparation: Antisense labelled with digoxigenin RNA
Visualized with: Alkaline phosphatase
Assay notes: Cryosections of fresh frozen material were fixed in 4% paraformaldehyde for 20 min. before further processing. A tyramide-biotin/streptavidin amplification step was included in the in situ hybridization procedure.
Results
Specimen euxassay_010956_01: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: vertebral axis musculature Weak Regionally restricted euxassay_010956_01
TS23: diaphragm Weak Regionally restricted euxassay_010956_01
Specimen euxassay_010956_02: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: brain Moderate Regionally restricted euxassay_010956_02
TS23: diaphragm Weak Regionally restricted euxassay_010956_02
TS23: vertebral axis musculature Weak Regionally restricted euxassay_010956_02
Specimen euxassay_010956_03: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: brain Moderate Regionally restricted euxassay_010956_03
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_010956_03
TS23: vestibulo-cochlear ganglion Moderate Regionally restricted euxassay_010956_03
TS23: diaphragm Weak Regionally restricted euxassay_010956_03
TS23: vertebral axis musculature Weak Regionally restricted euxassay_010956_03
Specimen euxassay_010956_04: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: brain Moderate Regionally restricted euxassay_010956_04
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_010956_04
TS23: facial ganglion Moderate Regionally restricted euxassay_010956_04
TS23: vestibulo-cochlear ganglion Moderate Regionally restricted euxassay_010956_04
TS23: diaphragm Weak Regionally restricted euxassay_010956_04
TS23: vertebral axis musculature Weak Regionally restricted euxassay_010956_04
TS23: upper leg muscle Weak Regionally restricted euxassay_010956_04
TS23: lower leg rest of mesenchyme Weak Regionally restricted euxassay_010956_04
TS23: upper arm muscle Weak Regionally restricted euxassay_010956_04
TS23: stomach Weak Regionally restricted euxassay_010956_04
Specimen euxassay_010956_05: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: brain Moderate Regionally restricted euxassay_010956_05
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_010956_05
TS23: facial ganglion Moderate Regionally restricted euxassay_010956_05
TS23: vestibulo-cochlear ganglion Moderate Regionally restricted euxassay_010956_05
TS23: diaphragm Weak Regionally restricted euxassay_010956_05
TS23: vertebral axis musculature Weak Regionally restricted euxassay_010956_05
TS23: upper leg muscle Weak Regionally restricted euxassay_010956_05
TS23: upper arm muscle Weak Regionally restricted euxassay_010956_05
TS23: stomach Weak Regionally restricted euxassay_010956_05
Specimen euxassay_010956_06: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: brain Moderate Regionally restricted euxassay_010956_06
TS23: dorsal root ganglion Moderate Regionally restricted euxassay_010956_06
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_010956_06
TS23: glossopharyngeal ganglion Moderate Regionally restricted euxassay_010956_06
TS23: vestibulo-cochlear ganglion Moderate Regionally restricted euxassay_010956_06
TS23: diaphragm Weak Regionally restricted euxassay_010956_06
TS23: vertebral axis musculature Weak Regionally restricted euxassay_010956_06
TS23: upper leg muscle Weak Regionally restricted euxassay_010956_06
TS23: stomach Weak Regionally restricted euxassay_010956_06
Specimen euxassay_010956_07: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: brain Moderate Regionally restricted euxassay_010956_07
TS23: spinal cord Moderate Regionally restricted euxassay_010956_07
TS23: dorsal root ganglion Moderate Regionally restricted euxassay_010956_07
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_010956_07
TS23: vagus ganglion Moderate Regionally restricted euxassay_010956_07
TS23: vestibulo-cochlear ganglion Moderate Regionally restricted euxassay_010956_07
TS23: diaphragm Weak Regionally restricted euxassay_010956_07
TS23: vertebral axis musculature Weak Regionally restricted euxassay_010956_07
TS23: upper leg muscle Weak Regionally restricted euxassay_010956_07
TS23: stomach Weak Regionally restricted euxassay_010956_07
TS23: metanephros Weak Regionally restricted euxassay_010956_07
Specimen euxassay_010956_08: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: brain Moderate Regionally restricted euxassay_010956_08
TS23: spinal cord Moderate Regionally restricted euxassay_010956_08
TS23: dorsal root ganglion Moderate Regionally restricted euxassay_010956_08
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_010956_08
TS23: vestibulo-cochlear ganglion Moderate Regionally restricted euxassay_010956_08
TS23: diaphragm Weak Regionally restricted euxassay_010956_08
TS23: vertebral axis musculature Weak Regionally restricted euxassay_010956_08
TS23: upper leg muscle Weak Regionally restricted euxassay_010956_08
TS23: stomach Weak Regionally restricted euxassay_010956_08
TS23: metanephros Weak Regionally restricted euxassay_010956_08
Specimen euxassay_010956_09: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: brain Moderate Regionally restricted euxassay_010956_09
TS23: spinal cord Moderate Regionally restricted euxassay_010956_09
TS23: dorsal root ganglion Moderate Regionally restricted euxassay_010956_09
TS23: diaphragm Weak Regionally restricted euxassay_010956_09
TS23: vertebral axis musculature Weak Regionally restricted euxassay_010956_09
TS23: stomach Weak Regionally restricted euxassay_010956_09
TS23: midgut Weak Regionally restricted euxassay_010956_09
TS23: olfactory epithelium Weak Regionally restricted euxassay_010956_09
TS23: metanephros Weak Regionally restricted euxassay_010956_09
Specimen euxassay_010956_10: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: brain Moderate Regionally restricted euxassay_010956_10
TS23: spinal cord Moderate Regionally restricted euxassay_010956_10
TS23: dorsal root ganglion Moderate Regionally restricted euxassay_010956_10
TS23: diaphragm Weak Regionally restricted euxassay_010956_10
TS23: vertebral axis musculature Weak Regionally restricted euxassay_010956_10
TS23: tail paraxial mesenchyme Weak Regionally restricted euxassay_010956_10
TS23: stomach Weak Regionally restricted euxassay_010956_10
TS23: midgut Weak Regionally restricted euxassay_010956_10
TS23: olfactory epithelium Weak Regionally restricted euxassay_010956_10
TS23: metanephros Weak Regionally restricted euxassay_010956_10
Specimen euxassay_010956_11: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: brain Moderate Regionally restricted euxassay_010956_11
TS23: spinal cord Moderate Regionally restricted euxassay_010956_11
TS23: dorsal root ganglion Moderate Regionally restricted euxassay_010956_11
TS23: diaphragm Weak Regionally restricted euxassay_010956_11
TS23: vertebral axis musculature Weak Regionally restricted euxassay_010956_11
TS23: tail paraxial mesenchyme Weak Regionally restricted euxassay_010956_11
TS23: midgut Weak Regionally restricted euxassay_010956_11
TS23: stomach Weak Regionally restricted euxassay_010956_11
TS23: olfactory epithelium Weak Regionally restricted euxassay_010956_11
TS23: metanephros Weak Regionally restricted euxassay_010956_11
Specimen euxassay_010956_12: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: brain Moderate Regionally restricted euxassay_010956_12
TS23: spinal cord Moderate Regionally restricted euxassay_010956_12
TS23: diaphragm Weak Regionally restricted euxassay_010956_12
TS23: vertebral axis musculature Weak Regionally restricted euxassay_010956_12
TS23: tail paraxial mesenchyme Weak Regionally restricted euxassay_010956_12
TS23: tongue muscle Weak Regionally restricted euxassay_010956_12
TS23: midgut Weak Regionally restricted euxassay_010956_12
TS23: olfactory epithelium Weak Regionally restricted euxassay_010956_12
Specimen euxassay_010956_13: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: brain Moderate Regionally restricted euxassay_010956_13
TS23: spinal cord Moderate Regionally restricted euxassay_010956_13
TS23: diaphragm Weak Regionally restricted euxassay_010956_13
TS23: vertebral axis musculature Weak Regionally restricted euxassay_010956_13
TS23: tail paraxial mesenchyme Weak Regionally restricted euxassay_010956_13
TS23: tongue muscle Weak Regionally restricted euxassay_010956_13
TS23: midgut Weak Regionally restricted euxassay_010956_13
TS23: olfactory epithelium Moderate Regionally restricted euxassay_010956_13
TS23: vomeronasal organ Moderate Regionally restricted euxassay_010956_13
Specimen euxassay_010956_14: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: brain Moderate Regionally restricted euxassay_010956_14
TS23: spinal cord Moderate Regionally restricted euxassay_010956_14
TS23: diaphragm Weak Regionally restricted euxassay_010956_14
TS23: vertebral axis musculature Weak Regionally restricted euxassay_010956_14
TS23: tail paraxial mesenchyme Weak Regionally restricted euxassay_010956_14
TS23: tongue muscle Weak Regionally restricted euxassay_010956_14
TS23: midgut Weak Regionally restricted euxassay_010956_14
Specimen euxassay_010956_15: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: brain Moderate Regionally restricted euxassay_010956_15
TS23: spinal cord Moderate Regionally restricted euxassay_010956_15
TS23: diaphragm Weak Regionally restricted euxassay_010956_15
TS23: vertebral axis musculature Weak Regionally restricted euxassay_010956_15
TS23: tail paraxial mesenchyme Weak Regionally restricted euxassay_010956_15
TS23: tongue muscle Weak Regionally restricted euxassay_010956_15
TS23: midgut Weak Regionally restricted euxassay_010956_15
TS23: olfactory epithelium Moderate Regionally restricted euxassay_010956_15
Specimen euxassay_010956_16: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: brain Moderate Regionally restricted euxassay_010956_16
TS23: spinal cord Moderate Regionally restricted euxassay_010956_16
TS23: dorsal root ganglion Moderate Regionally restricted euxassay_010956_16
TS23: diaphragm Weak Regionally restricted euxassay_010956_16
TS23: vertebral axis musculature Weak Regionally restricted euxassay_010956_16
TS23: tail paraxial mesenchyme Weak Regionally restricted euxassay_010956_16
TS23: tongue muscle Weak Regionally restricted euxassay_010956_16
TS23: midgut Weak Regionally restricted euxassay_010956_16
TS23: olfactory epithelium Moderate Regionally restricted euxassay_010956_16
TS23: vomeronasal organ Moderate Regionally restricted euxassay_010956_16
Specimen euxassay_010956_17: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: brain Moderate Regionally restricted euxassay_010956_17
TS23: spinal cord Moderate Regionally restricted euxassay_010956_17
TS23: dorsal root ganglion Moderate Regionally restricted euxassay_010956_17
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_010956_17
TS23: vestibulo-cochlear ganglion Moderate Regionally restricted euxassay_010956_17
TS23: glossopharyngeal ganglion Moderate Regionally restricted euxassay_010956_17
TS23: diaphragm Weak Regionally restricted euxassay_010956_17
TS23: vertebral axis musculature Weak Regionally restricted euxassay_010956_17
TS23: tail paraxial mesenchyme Weak Regionally restricted euxassay_010956_17
TS23: tongue muscle Weak Regionally restricted euxassay_010956_17
TS23: midgut Weak Regionally restricted euxassay_010956_17
TS23: olfactory epithelium Moderate Regionally restricted euxassay_010956_17
Specimen euxassay_010956_18: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: brain Moderate Regionally restricted euxassay_010956_18
TS23: spinal cord Moderate Regionally restricted euxassay_010956_18
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_010956_18
TS23: vestibulo-cochlear ganglion Moderate Regionally restricted euxassay_010956_18
TS23: glossopharyngeal ganglion Moderate Regionally restricted euxassay_010956_18
TS23: diaphragm Weak Regionally restricted euxassay_010956_18
TS23: vertebral axis musculature Weak Regionally restricted euxassay_010956_18
TS23: tail paraxial mesenchyme Weak Regionally restricted euxassay_010956_18
TS23: midgut Weak Regionally restricted euxassay_010956_18
TS23: olfactory epithelium Weak Regionally restricted euxassay_010956_18
TS23: metanephros Weak Regionally restricted euxassay_010956_18
Specimen euxassay_010956_19: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: brain Moderate Regionally restricted euxassay_010956_19
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_010956_19
TS23: vestibulo-cochlear ganglion Moderate Regionally restricted euxassay_010956_19
TS23: diaphragm Weak Regionally restricted euxassay_010956_19
TS23: vertebral axis musculature Weak Regionally restricted euxassay_010956_19
TS23: tail paraxial mesenchyme Weak Regionally restricted euxassay_010956_19
TS23: midgut Weak Regionally restricted euxassay_010956_19
TS23: olfactory epithelium Weak Regionally restricted euxassay_010956_19
TS23: metanephros Weak Regionally restricted euxassay_010956_19
Specimen euxassay_010956_20: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: brain Moderate Regionally restricted euxassay_010956_20
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_010956_20
TS23: vestibulo-cochlear ganglion Moderate Regionally restricted euxassay_010956_20
TS23: facial ganglion Moderate Regionally restricted euxassay_010956_20
TS23: diaphragm Weak Regionally restricted euxassay_010956_20
TS23: vertebral axis musculature Weak Regionally restricted euxassay_010956_20
TS23: upper leg muscle Weak Regionally restricted euxassay_010956_20
TS23: metanephros Weak Regionally restricted euxassay_010956_20
Specimen euxassay_010956_21: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: brain Moderate Regionally restricted euxassay_010956_21
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_010956_21
TS23: diaphragm Weak Regionally restricted euxassay_010956_21
TS23: vertebral axis musculature Weak Regionally restricted euxassay_010956_21
TS23: upper leg muscle Weak Regionally restricted euxassay_010956_21
TS23: metanephros Weak Regionally restricted euxassay_010956_21
Specimen euxassay_010956_22: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: brain Moderate Regionally restricted euxassay_010956_22
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_010956_22
TS23: diaphragm Weak Regionally restricted euxassay_010956_22
TS23: vertebral axis musculature Weak Regionally restricted euxassay_010956_22
TS23: upper leg muscle Weak Regionally restricted euxassay_010956_22
TS23: upper arm muscle Weak Regionally restricted euxassay_010956_22
Specimen euxassay_010956_23: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: brain Moderate Regionally restricted euxassay_010956_23
TS23: diaphragm Weak Regionally restricted euxassay_010956_23
TS23: vertebral axis musculature Weak Regionally restricted euxassay_010956_23
TS23: upper arm muscle Weak Regionally restricted euxassay_010956_23
Specimen euxassay_010956_24: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: brain Moderate Regionally restricted euxassay_010956_24
TS23: tail dorsal root ganglion Moderate Regionally restricted euxassay_010956_24
TS23: diaphragm Weak Regionally restricted euxassay_010956_24
TS23: vertebral axis musculature Weak Regionally restricted euxassay_010956_24
TS23: upper arm muscle Weak Regionally restricted euxassay_010956_24
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
05/21/2024
MGI 6.23 		The Jackson Laboratory