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Gene Expression Data
Assay Details
Assay
Reference: J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
Assay type: RNA in situ
MGI Accession ID: MGI:4824132
Gene symbol: Cxcl12
Gene name: C-X-C motif chemokine ligand 12
Probe: MGC clone 61284
Probe preparation: Antisense labelled with digoxigenin RNA
Visualized with: Alkaline phosphatase
Assay notes: Cryosections of fresh frozen material were fixed in 4% paraformaldehyde for 20 min. before further processing. A tyramide-biotin/streptavidin amplification step was included in the in situ hybridization procedure.
Results
Specimen euxassay_005766_01: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: lower leg rest of mesenchyme Strong Regionally restricted euxassay_005766_01
TS23: forearm rest of mesenchyme Strong Regionally restricted euxassay_005766_01
TS23: cranial musculature Moderate Regionally restricted euxassay_005766_01
Specimen euxassay_005766_02: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon meninges Moderate Regionally restricted euxassay_005766_02
TS23: forearm rest of mesenchyme Strong Regionally restricted euxassay_005766_02
TS23: lower leg rest of mesenchyme Moderate Regionally restricted euxassay_005766_02
TS23: rib Moderate Regionally restricted euxassay_005766_02
TS23: cranial musculature Moderate Regionally restricted euxassay_005766_02
Specimen euxassay_005766_03: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon meninges Moderate Regionally restricted euxassay_005766_03
TS23: lower leg rest of mesenchyme Moderate Regionally restricted euxassay_005766_03
TS23: forearm rest of mesenchyme Moderate Regionally restricted euxassay_005766_03
TS23: upper arm rest of mesenchyme Moderate Regionally restricted euxassay_005766_03
TS23: rib Moderate Regionally restricted euxassay_005766_03
TS23: axial musculature Weak Regionally restricted euxassay_005766_03
TS23: cranial musculature Moderate Regionally restricted euxassay_005766_03
Specimen euxassay_005766_04: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon meninges Moderate Regionally restricted euxassay_005766_04
TS23: hindbrain meninges Moderate Regionally restricted euxassay_005766_04
TS23: lower leg rest of mesenchyme Moderate Regionally restricted euxassay_005766_04
TS23: upper leg rest of mesenchyme Moderate Regionally restricted euxassay_005766_04
TS23: upper arm rest of mesenchyme Moderate Regionally restricted euxassay_005766_04
TS23: forearm rest of mesenchyme Moderate Regionally restricted euxassay_005766_04
TS23: extrinsic ocular muscle Weak Regionally restricted euxassay_005766_04
TS23: rib Moderate Regionally restricted euxassay_005766_04
TS23: axial musculature Moderate Regionally restricted euxassay_005766_04
TS23: cranial musculature Moderate Regionally restricted euxassay_005766_04
Specimen euxassay_005766_05: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: hindbrain meninges Moderate Regionally restricted euxassay_005766_05
TS23: telencephalon meninges Moderate Regionally restricted euxassay_005766_05
TS23: midbrain meninges Moderate Regionally restricted euxassay_005766_05
TS23: upper leg rest of mesenchyme Moderate Regionally restricted euxassay_005766_05
TS23: hand mesenchyme Moderate Regionally restricted euxassay_005766_05
TS23: extrinsic ocular muscle Moderate Regionally restricted euxassay_005766_05
TS23: testis Moderate Regionally restricted euxassay_005766_05
TS23: rib Moderate Regionally restricted euxassay_005766_05
TS23: cranial musculature Moderate Regionally restricted euxassay_005766_05
Specimen euxassay_005766_06: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: midbrain meninges Moderate Regionally restricted euxassay_005766_06
TS23: hindbrain meninges Moderate Regionally restricted euxassay_005766_06
TS23: telencephalon meninges Moderate Regionally restricted euxassay_005766_06
TS23: hand mesenchyme Moderate Regionally restricted euxassay_005766_06
TS23: extrinsic ocular muscle Moderate Regionally restricted euxassay_005766_06
TS23: testis Weak Regionally restricted euxassay_005766_06
TS23: rib Moderate Regionally restricted euxassay_005766_06
TS23: trigeminal nerve maxillary division Strong Regionally restricted euxassay_005766_06
Specimen euxassay_005766_07: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: midbrain meninges Moderate Regionally restricted euxassay_005766_07
TS23: hindbrain meninges Moderate Regionally restricted euxassay_005766_07
TS23: telencephalon meninges Moderate Regionally restricted euxassay_005766_07
TS23: diencephalon meninges Moderate Regionally restricted euxassay_005766_07
TS23: interdigital region between hindlimb digits 1 and 2 Moderate Regionally restricted euxassay_005766_07
TS23: interdigital region between hindlimb digits 2 and 3 Moderate Regionally restricted euxassay_005766_07
TS23: interdigital region between hindlimb digits 3 and 4 Moderate Regionally restricted euxassay_005766_07
TS23: interdigital region between hindlimb digits 4 and 5 Moderate Regionally restricted euxassay_005766_07
TS23: testis Weak Regionally restricted euxassay_005766_07
TS23: rib Moderate Regionally restricted euxassay_005766_07
TS23: metanephros Moderate Regionally restricted euxassay_005766_07
TS23: trigeminal nerve maxillary division Strong Regionally restricted euxassay_005766_07
Specimen euxassay_005766_08: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: midbrain meninges Moderate Regionally restricted euxassay_005766_08
TS23: hindbrain meninges Moderate Regionally restricted euxassay_005766_08
TS23: telencephalon meninges Moderate Regionally restricted euxassay_005766_08
TS23: diencephalon meninges Moderate Regionally restricted euxassay_005766_08
TS23: interdigital region between hindlimb digits 1 and 2 Moderate Regionally restricted euxassay_005766_08
TS23: interdigital region between hindlimb digits 2 and 3 Moderate Regionally restricted euxassay_005766_08
TS23: interdigital region between hindlimb digits 3 and 4 Moderate Regionally restricted euxassay_005766_08
TS23: interdigital region between hindlimb digits 4 and 5 Moderate Regionally restricted euxassay_005766_08
TS23: testis Weak Regionally restricted euxassay_005766_08
TS23: rib Strong Regionally restricted euxassay_005766_08
TS23: metanephros Moderate Regionally restricted euxassay_005766_08
TS23: trigeminal nerve maxillary division Strong Regionally restricted euxassay_005766_08
Specimen euxassay_005766_09: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: midbrain meninges Moderate Regionally restricted euxassay_005766_09
TS23: hindbrain meninges Moderate Regionally restricted euxassay_005766_09
TS23: telencephalon meninges Moderate Regionally restricted euxassay_005766_09
TS23: diencephalon meninges Moderate Regionally restricted euxassay_005766_09
TS23: upper lip Moderate Regionally restricted euxassay_005766_09
TS23: lower lip Moderate Regionally restricted euxassay_005766_09
TS23: aorta Moderate Regionally restricted euxassay_005766_09
TS23: interdigital region between hindlimb digits 1 and 2 Moderate Regionally restricted euxassay_005766_09
TS23: interdigital region between hindlimb digits 2 and 3 Moderate Regionally restricted euxassay_005766_09
TS23: interdigital region between hindlimb digits 3 and 4 Moderate Regionally restricted euxassay_005766_09
TS23: interdigital region between hindlimb digits 4 and 5 Moderate Regionally restricted euxassay_005766_09
TS23: turbinate bone primordium Strong Regionally restricted euxassay_005766_09
TS23: rib Strong Regionally restricted euxassay_005766_09
TS23: metanephros Moderate Regionally restricted euxassay_005766_09
Specimen euxassay_005766_10: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: midbrain meninges Moderate Regionally restricted euxassay_005766_10
TS23: hindbrain meninges Moderate Regionally restricted euxassay_005766_10
TS23: telencephalon meninges Moderate Regionally restricted euxassay_005766_10
TS23: diencephalon meninges Moderate Regionally restricted euxassay_005766_10
TS23: upper lip Moderate Regionally restricted euxassay_005766_10
TS23: lower lip Moderate Regionally restricted euxassay_005766_10
TS23: aorta Moderate Regionally restricted euxassay_005766_10
TS23: turbinate bone primordium Strong Regionally restricted euxassay_005766_10
TS23: nephric duct of male Moderate Regionally restricted euxassay_005766_10
TS23: rib Strong Regionally restricted euxassay_005766_10
Specimen euxassay_005766_11: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: midbrain meninges Moderate Regionally restricted euxassay_005766_11
TS23: hindbrain meninges Moderate Regionally restricted euxassay_005766_11
TS23: telencephalon meninges Moderate Regionally restricted euxassay_005766_11
TS23: diencephalon meninges Moderate Regionally restricted euxassay_005766_11
TS23: upper lip Moderate Regionally restricted euxassay_005766_11
TS23: lower lip Moderate Regionally restricted euxassay_005766_11
TS23: aorta Moderate Regionally restricted euxassay_005766_11
TS23: turbinate bone primordium Moderate Regionally restricted euxassay_005766_11
TS23: rib Strong Regionally restricted euxassay_005766_11
Specimen euxassay_005766_12: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: midbrain meninges Moderate Regionally restricted euxassay_005766_12
TS23: hindbrain meninges Moderate Regionally restricted euxassay_005766_12
TS23: telencephalon meninges Moderate Regionally restricted euxassay_005766_12
TS23: diencephalon meninges Moderate Regionally restricted euxassay_005766_12
TS23: bladder Weak Regionally restricted euxassay_005766_12
TS23: upper lip Moderate Regionally restricted euxassay_005766_12
TS23: lower lip Moderate Regionally restricted euxassay_005766_12
TS23: aorta Moderate Regionally restricted euxassay_005766_12
TS23: turbinate bone primordium Weak Regionally restricted euxassay_005766_12
TS23: glans of male genital tubercle Moderate Regionally restricted euxassay_005766_12
TS23: rib Strong Regionally restricted euxassay_005766_12
TS23: tongue Weak Regionally restricted euxassay_005766_12
Specimen euxassay_005766_13: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: midbrain meninges Moderate Regionally restricted euxassay_005766_13
TS23: hindbrain meninges Moderate Regionally restricted euxassay_005766_13
TS23: telencephalon meninges Moderate Regionally restricted euxassay_005766_13
TS23: diencephalon meninges Moderate Regionally restricted euxassay_005766_13
TS23: bladder Weak Regionally restricted euxassay_005766_13
TS23: upper lip Strong Regionally restricted euxassay_005766_13
TS23: lower lip Strong Regionally restricted euxassay_005766_13
TS23: aorta Moderate Regionally restricted euxassay_005766_13
TS23: turbinate bone primordium Moderate Regionally restricted euxassay_005766_13
TS23: glans of male genital tubercle Moderate Regionally restricted euxassay_005766_13
TS23: tongue Weak Regionally restricted euxassay_005766_13
Specimen euxassay_005766_14: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: midbrain meninges Moderate Regionally restricted euxassay_005766_14
TS23: hindbrain meninges Moderate Regionally restricted euxassay_005766_14
TS23: telencephalon meninges Moderate Regionally restricted euxassay_005766_14
TS23: diencephalon meninges Moderate Regionally restricted euxassay_005766_14
TS23: bladder Weak Regionally restricted euxassay_005766_14
TS23: upper lip Moderate Regionally restricted euxassay_005766_14
TS23: lower lip Moderate Regionally restricted euxassay_005766_14
TS23: aorta Moderate Regionally restricted euxassay_005766_14
TS23: glans of male genital tubercle Moderate Regionally restricted euxassay_005766_14
TS23: nephric duct of male Moderate Regionally restricted euxassay_005766_14
TS23: rib Strong Regionally restricted euxassay_005766_14
TS23: physiological umbilical hernia Weak Regionally restricted euxassay_005766_14
Specimen euxassay_005766_15: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: midbrain meninges Moderate Regionally restricted euxassay_005766_15
TS23: hindbrain meninges Moderate Regionally restricted euxassay_005766_15
TS23: telencephalon meninges Moderate Regionally restricted euxassay_005766_15
TS23: diencephalon meninges Moderate Regionally restricted euxassay_005766_15
TS23: upper lip Moderate Regionally restricted euxassay_005766_15
TS23: lower lip Moderate Regionally restricted euxassay_005766_15
TS23: rib Strong Regionally restricted euxassay_005766_15
TS23: metanephros Moderate Regionally restricted euxassay_005766_15
TS23: physiological umbilical hernia Weak Regionally restricted euxassay_005766_15
TS23: tongue Weak Regionally restricted euxassay_005766_15
Specimen euxassay_005766_16: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: midbrain meninges Moderate Regionally restricted euxassay_005766_16
TS23: hindbrain meninges Moderate Regionally restricted euxassay_005766_16
TS23: telencephalon meninges Moderate Regionally restricted euxassay_005766_16
TS23: diencephalon meninges Moderate Regionally restricted euxassay_005766_16
TS23: turbinate bone primordium Moderate Regionally restricted euxassay_005766_16
TS23: glans of male genital tubercle Weak Regionally restricted euxassay_005766_16
TS23: rib Strong Regionally restricted euxassay_005766_16
TS23: metanephros Moderate Regionally restricted euxassay_005766_16
TS23: physiological umbilical hernia Weak Regionally restricted euxassay_005766_16
Specimen euxassay_005766_17: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: midbrain meninges Moderate Regionally restricted euxassay_005766_17
TS23: hindbrain meninges Moderate Regionally restricted euxassay_005766_17
TS23: telencephalon meninges Moderate Regionally restricted euxassay_005766_17
TS23: diencephalon meninges Moderate Regionally restricted euxassay_005766_17
TS23: upper lip Strong Regionally restricted euxassay_005766_17
TS23: lower lip Strong Regionally restricted euxassay_005766_17
TS23: turbinate bone primordium Strong Regionally restricted euxassay_005766_17
TS23: testis Weak Regionally restricted euxassay_005766_17
TS23: rib Strong Regionally restricted euxassay_005766_17
TS23: metanephros Moderate Regionally restricted euxassay_005766_17
Specimen euxassay_005766_18: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: midbrain meninges Moderate Regionally restricted euxassay_005766_18
TS23: hindbrain meninges Moderate Regionally restricted euxassay_005766_18
TS23: telencephalon meninges Moderate Regionally restricted euxassay_005766_18
TS23: diencephalon meninges Moderate Regionally restricted euxassay_005766_18
TS23: upper lip Strong Regionally restricted euxassay_005766_18
TS23: lower lip Strong Regionally restricted euxassay_005766_18
TS23: turbinate bone primordium Strong Regionally restricted euxassay_005766_18
TS23: testis Weak Regionally restricted euxassay_005766_18
TS23: rib Strong Regionally restricted euxassay_005766_18
Specimen euxassay_005766_19: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: hindbrain meninges Moderate Regionally restricted euxassay_005766_19
TS23: telencephalon meninges Moderate Regionally restricted euxassay_005766_19
TS23: lower lip Moderate Regionally restricted euxassay_005766_19
TS23: upper lip Strong Regionally restricted euxassay_005766_19
TS23: turbinate bone primordium Strong Regionally restricted euxassay_005766_19
TS23: testis Weak Regionally restricted euxassay_005766_19
TS23: rib Strong Regionally restricted euxassay_005766_19
Specimen euxassay_005766_20: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: hindbrain meninges Moderate Regionally restricted euxassay_005766_20
TS23: telencephalon meninges Moderate Regionally restricted euxassay_005766_20
TS23: extrinsic ocular muscle Moderate Regionally restricted euxassay_005766_20
TS23: rib Strong Regionally restricted euxassay_005766_20
TS23: trigeminal nerve maxillary division Strong Regionally restricted euxassay_005766_20
TS23: axial musculature Moderate Regionally restricted euxassay_005766_20
TS23: cranial musculature Moderate Regionally restricted euxassay_005766_20
Specimen euxassay_005766_21: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon meninges Moderate Regionally restricted euxassay_005766_21
TS23: hand mesenchyme Moderate Regionally restricted euxassay_005766_21
TS23: foot mesenchyme Moderate Regionally restricted euxassay_005766_21
TS23: extrinsic ocular muscle Moderate Regionally restricted euxassay_005766_21
TS23: rib Strong Regionally restricted euxassay_005766_21
TS23: trigeminal nerve maxillary division Strong Regionally restricted euxassay_005766_21
TS23: axial musculature Moderate Regionally restricted euxassay_005766_21
TS23: cranial musculature Moderate Regionally restricted euxassay_005766_21
Specimen euxassay_005766_22: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon meninges Moderate Regionally restricted euxassay_005766_22
TS23: foot mesenchyme Moderate Regionally restricted euxassay_005766_22
TS23: interdigital region between hindlimb digits 4 and 5 Moderate Regionally restricted euxassay_005766_22
TS23: interdigital region between hindlimb digits 3 and 4 Moderate Regionally restricted euxassay_005766_22
TS23: interdigital region between hindlimb digits 2 and 3 Moderate Regionally restricted euxassay_005766_22
TS23: interdigital region between hindlimb digits 1 and 2 Moderate Regionally restricted euxassay_005766_22
TS23: hand mesenchyme Moderate Regionally restricted euxassay_005766_22
TS23: extrinsic ocular muscle Weak Regionally restricted euxassay_005766_22
TS23: rib Moderate Regionally restricted euxassay_005766_22
TS23: trigeminal nerve maxillary division Moderate Regionally restricted euxassay_005766_22
TS23: cranial musculature Moderate Regionally restricted euxassay_005766_22
Specimen euxassay_005766_23: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon meninges Moderate Regionally restricted euxassay_005766_23
TS23: interdigital region between hindlimb digits 4 and 5 Weak Regionally restricted euxassay_005766_23
TS23: interdigital region between hindlimb digits 3 and 4 Weak Regionally restricted euxassay_005766_23
TS23: interdigital region between hindlimb digits 2 and 3 Weak Regionally restricted euxassay_005766_23
TS23: interdigital region between hindlimb digits 1 and 2 Weak Regionally restricted euxassay_005766_23
TS23: upper arm rest of mesenchyme Moderate Regionally restricted euxassay_005766_23
TS23: hand mesenchyme Weak Regionally restricted euxassay_005766_23
TS23: extrinsic ocular muscle Weak Regionally restricted euxassay_005766_23
TS23: rib Moderate Regionally restricted euxassay_005766_23
TS23: cranial musculature Moderate Regionally restricted euxassay_005766_23
Specimen euxassay_005766_24: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon meninges Moderate Regionally restricted euxassay_005766_24
TS23: interdigital region between hindlimb digits 3 and 4 Moderate Regionally restricted euxassay_005766_24
TS23: interdigital region between hindlimb digits 2 and 3 Moderate Regionally restricted euxassay_005766_24
TS23: interdigital region between hindlimb digits 1 and 2 Moderate Regionally restricted euxassay_005766_24
TS23: interdigital region between hindlimb digits 4 and 5 Moderate Regionally restricted euxassay_005766_24
TS23: hand mesenchyme Moderate Regionally restricted euxassay_005766_24
TS23: upper arm rest of mesenchyme Moderate Regionally restricted euxassay_005766_24
TS23: upper leg rest of mesenchyme Moderate Regionally restricted euxassay_005766_24
TS23: lower leg rest of mesenchyme Moderate Regionally restricted euxassay_005766_24
TS23: extrinsic ocular muscle Weak Regionally restricted euxassay_005766_24
TS23: cranial musculature Moderate Regionally restricted euxassay_005766_24
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
05/07/2024
MGI 6.23 		The Jackson Laboratory