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Gene Expression Data
Assay Details
Assay
Reference: J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
Assay type: RNA in situ
MGI Accession ID: MGI:4824077
Gene symbol: Cse1l
Gene name: chromosome segregation 1 like
Probe: IMAGE clone 821867
Probe preparation: Antisense labelled with digoxigenin RNA
Visualized with: Alkaline phosphatase
Assay notes: Cryosections of fresh frozen material were fixed in 4% paraformaldehyde for 20 min. before further processing. A tyramide-biotin/streptavidin amplification step was included in the in situ hybridization procedure.
Results
Specimen euxassay_000112_01: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: liver Strong Spotted euxassay_000112_01
TS23: vertebral axis musculature Moderate Regionally restricted euxassay_000112_01
Specimen euxassay_000112_02: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: liver Strong Spotted euxassay_000112_02
TS23: cerebral cortex ventricular layer Strong Uniform euxassay_000112_02
TS23: vertebral axis musculature Moderate Regionally restricted euxassay_000112_02
Specimen euxassay_000112_03: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: cerebral cortex ventricular layer Strong Uniform euxassay_000112_03
TS23: liver Strong Spotted euxassay_000112_03
TS23: vertebral axis musculature Moderate Regionally restricted euxassay_000112_03
Specimen euxassay_000112_04: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: cerebral cortex ventricular layer Strong Uniform euxassay_000112_04
TS23: vertebral axis musculature Moderate Regionally restricted euxassay_000112_04
Specimen euxassay_000112_05: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: cerebral cortex ventricular layer Strong Uniform euxassay_000112_05
TS23: vertebral axis musculature Moderate Regionally restricted euxassay_000112_05
Specimen euxassay_000112_06: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: lung Strong Spotted euxassay_000112_06
TS23: liver Strong Spotted euxassay_000112_06
TS23: trigeminal ganglion Weak Uniform euxassay_000112_06
TS23: glossopharyngeal ganglion Weak Uniform euxassay_000112_06
TS23: cerebral cortex ventricular layer Strong Uniform euxassay_000112_06
TS23: vibrissa Moderate Regionally restricted euxassay_000112_06
TS23: vertebral axis musculature Moderate Regionally restricted euxassay_000112_06
Specimen euxassay_000112_07: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: vibrissa Moderate Regionally restricted euxassay_000112_07
TS23: trigeminal ganglion Weak Uniform euxassay_000112_07
TS23: vagus ganglion Weak Uniform euxassay_000112_07
TS23: liver Strong Spotted euxassay_000112_07
TS23: lung Strong Spotted euxassay_000112_07
TS23: vertebral axis musculature Moderate Regionally restricted euxassay_000112_07
Specimen euxassay_000112_08: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: lung Strong Spotted euxassay_000112_08
TS23: liver Strong Spotted euxassay_000112_08
TS23: vibrissa Strong Regionally restricted euxassay_000112_08
TS23: trigeminal ganglion Weak Uniform euxassay_000112_08
TS23: cerebral cortex ventricular layer Strong Uniform euxassay_000112_08
TS23: submandibular gland primordium Strong Regionally restricted euxassay_000112_08
TS23: vertebral axis musculature Moderate Regionally restricted euxassay_000112_08
Specimen euxassay_000112_09: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Moderate Uniform euxassay_000112_09
TS23: glossopharyngeal ganglion Moderate Uniform euxassay_000112_09
TS23: vibrissa Moderate Regionally restricted euxassay_000112_09
TS23: cerebral cortex ventricular layer Strong Uniform euxassay_000112_09
TS23: submandibular gland primordium Strong Regionally restricted euxassay_000112_09
TS23: lung Strong Spotted euxassay_000112_09
TS23: liver Strong Spotted euxassay_000112_09
TS23: metanephros Strong Spotted euxassay_000112_09
TS23: vertebral axis musculature Moderate Regionally restricted euxassay_000112_09
Specimen euxassay_000112_10: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: vibrissa Moderate Regionally restricted euxassay_000112_10
TS23: cerebral cortex ventricular layer Strong Uniform euxassay_000112_10
TS23: turbinate bone primordium Moderate Regionally restricted euxassay_000112_10
TS23: liver Moderate Regionally restricted euxassay_000112_10
TS23: metanephros Strong Regionally restricted euxassay_000112_10
TS23: lung Moderate Regionally restricted euxassay_000112_10
TS23: trigeminal ganglion Moderate Uniform euxassay_000112_10
TS23: vagus ganglion Moderate Uniform euxassay_000112_10
TS23: glossopharyngeal ganglion Moderate Uniform euxassay_000112_10
TS23: vertebral axis musculature Moderate Regionally restricted euxassay_000112_10
Specimen euxassay_000112_11: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: cerebral cortex ventricular layer Strong Uniform euxassay_000112_11
TS23: midbrain ventricular layer Strong Uniform euxassay_000112_11
TS23: submandibular gland primordium Strong Regionally restricted euxassay_000112_11
TS23: metanephros Strong Regionally restricted euxassay_000112_11
TS23: liver Weak Spotted euxassay_000112_11
TS23: lung Moderate Spotted euxassay_000112_11
TS23: turbinate bone primordium Weak Regionally restricted euxassay_000112_11
TS23: vibrissa Moderate Regionally restricted euxassay_000112_11
Specimen euxassay_000112_12: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: lung Strong Spotted euxassay_000112_12
TS23: metanephros Strong Regionally restricted euxassay_000112_12
TS23: liver Weak Spotted euxassay_000112_12
TS23: oral region gland Moderate Uniform euxassay_000112_12
TS23: submandibular gland primordium Moderate Uniform euxassay_000112_12
TS23: midbrain ventricular layer Strong Uniform euxassay_000112_12
TS23: cerebral cortex ventricular layer Strong Uniform euxassay_000112_12
Specimen euxassay_000112_13: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: thymus primordium Strong Uniform euxassay_000112_13
TS23: midbrain ventricular layer Strong Uniform euxassay_000112_13
TS23: cerebral cortex ventricular layer Strong Uniform euxassay_000112_13
TS23: lower jaw incisor Strong Regionally restricted euxassay_000112_13
TS23: upper jaw incisor Strong Regionally restricted euxassay_000112_13
TS23: lung Moderate Spotted euxassay_000112_13
TS23: liver Moderate Spotted euxassay_000112_13
Specimen euxassay_000112_14: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: liver Moderate Spotted euxassay_000112_14
TS23: lung Moderate Spotted euxassay_000112_14
TS23: upper jaw incisor Strong Regionally restricted euxassay_000112_14
TS23: lower jaw incisor Strong Regionally restricted euxassay_000112_14
TS23: midbrain ventricular layer Strong Uniform euxassay_000112_14
TS23: cerebral cortex ventricular layer Strong Uniform euxassay_000112_14
TS23: thymus primordium Strong Uniform euxassay_000112_14
Specimen euxassay_000112_15: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: liver Weak Spotted euxassay_000112_15
TS23: midbrain ventricular layer Strong Uniform euxassay_000112_15
TS23: cerebral cortex ventricular layer Strong Uniform euxassay_000112_15
TS23: diencephalon lateral wall ventricular layer Strong Uniform euxassay_000112_15
TS23: lower jaw incisor Strong Regionally restricted euxassay_000112_15
TS23: upper jaw incisor Strong Regionally restricted euxassay_000112_15
Specimen euxassay_000112_16: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: midbrain ventricular layer Strong Uniform euxassay_000112_16
TS23: thymus primordium Moderate Uniform euxassay_000112_16
TS23: lung Moderate Spotted euxassay_000112_16
TS23: liver Weak Spotted euxassay_000112_16
Specimen euxassay_000112_17: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: cerebral cortex ventricular layer Strong Uniform euxassay_000112_17
TS23: midbrain ventricular layer Strong Uniform euxassay_000112_17
TS23: thymus primordium Moderate Uniform euxassay_000112_17
TS23: liver Moderate Spotted euxassay_000112_17
TS23: lung Moderate Spotted euxassay_000112_17
Specimen euxassay_000112_18: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: lower jaw incisor Strong Regionally restricted euxassay_000112_18
TS23: cerebral cortex ventricular layer Strong Uniform euxassay_000112_18
TS23: thymus primordium Moderate Uniform euxassay_000112_18
TS23: upper jaw incisor Strong Regionally restricted euxassay_000112_18
TS23: lung Moderate Regionally restricted euxassay_000112_18
TS23: liver Moderate Spotted euxassay_000112_18
Specimen euxassay_000112_19: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: lung Moderate Spotted euxassay_000112_19
TS23: metanephros Moderate Regionally restricted euxassay_000112_19
TS23: upper jaw incisor Strong Regionally restricted euxassay_000112_19
TS23: lower jaw incisor Strong Regionally restricted euxassay_000112_19
TS23: submandibular gland primordium Strong Uniform euxassay_000112_19
TS23: cerebral cortex ventricular layer Strong euxassay_000112_19
Specimen euxassay_000112_20: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: lung Moderate Spotted euxassay_000112_20
TS23: renal cortex Strong Uniform euxassay_000112_20
TS23: submandibular gland primordium Strong Uniform euxassay_000112_20
TS23: cerebral cortex ventricular layer Strong Uniform euxassay_000112_20
TS23: trigeminal ganglion Weak Uniform euxassay_000112_20
TS23: upper jaw incisor Strong Regionally restricted euxassay_000112_20
TS23: liver Weak Uniform euxassay_000112_20
TS23: physiological umbilical hernia Moderate Regionally restricted euxassay_000112_20
Specimen euxassay_000112_21: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: cerebral cortex ventricular layer Strong Uniform euxassay_000112_21
TS23: submandibular gland primordium Strong Uniform euxassay_000112_21
TS23: renal cortex Moderate Uniform euxassay_000112_21
TS23: liver Weak Uniform euxassay_000112_21
TS23: lung Moderate Spotted euxassay_000112_21
Specimen euxassay_000112_22: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: submandibular gland primordium Strong Uniform euxassay_000112_22
TS23: liver Weak Graded euxassay_000112_22
TS23: renal cortex Strong Uniform euxassay_000112_22
TS23: lung Moderate Spotted euxassay_000112_22
TS23: cerebral cortex ventricular layer Strong Uniform euxassay_000112_22
Specimen euxassay_000112_23: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: vibrissa Strong Spotted euxassay_000112_23
TS23: cerebral cortex ventricular layer Strong Uniform euxassay_000112_23
TS23: liver Moderate Uniform euxassay_000112_23
TS23: lung Moderate Spotted euxassay_000112_23
TS23: metanephros Strong Uniform euxassay_000112_23
TS23: renal cortex Strong Uniform euxassay_000112_23
TS23: submandibular gland primordium Strong Uniform euxassay_000112_23
Specimen euxassay_000112_24: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: cerebral cortex ventricular layer Strong Uniform euxassay_000112_24
TS23: liver Moderate Uniform euxassay_000112_24
TS23: metanephros Moderate Uniform euxassay_000112_24
TS23: lung Moderate Spotted euxassay_000112_24
TS23: vibrissa Strong Single cells euxassay_000112_24
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
05/07/2024
MGI 6.23 		The Jackson Laboratory