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Gene Expression Data
Assay Details
Assay
Reference: J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
Assay type: RNA in situ
MGI Accession ID: MGI:4824026
Gene symbol: Cplx1
Gene name: complexin 1
Probe: IMAGE clone 335763
Probe preparation: Antisense labelled with digoxigenin RNA
Visualized with: Alkaline phosphatase
Assay notes: Cryosections of fresh frozen material were fixed in 4% paraformaldehyde for 20 min. before further processing. A tyramide-biotin/streptavidin amplification step was included in the in situ hybridization procedure.
Results
Specimen euxassay_009164_01: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: brain Moderate Regionally restricted euxassay_009164_01
TS23: cerebral cortex marginal layer Strong Regionally restricted euxassay_009164_01
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_009164_01
Specimen euxassay_009164_02: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: brain Moderate Regionally restricted euxassay_009164_02
TS23: cerebral cortex marginal layer Strong Regionally restricted euxassay_009164_02
TS23: midbrain mantle layer Strong Single cells euxassay_009164_02
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_009164_02
TS23: rest of cerebellum mantle layer Strong Regionally restricted euxassay_009164_02
TS23: pons mantle layer Strong Regionally restricted euxassay_009164_02
TS23: trigeminal ganglion Strong Regionally restricted euxassay_009164_02
TS23: facial ganglion Strong Regionally restricted euxassay_009164_02
TS23: neural retina Moderate Regionally restricted euxassay_009164_02
Specimen euxassay_009164_03: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: brain Moderate Regionally restricted euxassay_009164_03
TS23: cerebral cortex marginal layer Strong Regionally restricted euxassay_009164_03
TS23: midbrain mantle layer Strong Single cells euxassay_009164_03
TS23: pons mantle layer Strong Regionally restricted euxassay_009164_03
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_009164_03
TS23: rest of cerebellum mantle layer Strong Regionally restricted euxassay_009164_03
TS23: trigeminal ganglion Strong Regionally restricted euxassay_009164_03
TS23: facial ganglion Strong Regionally restricted euxassay_009164_03
TS23: glossopharyngeal ganglion Strong Regionally restricted euxassay_009164_03
TS23: vestibulo-cochlear ganglion Strong Regionally restricted euxassay_009164_03
TS23: dorsal root ganglion Strong Regionally restricted euxassay_009164_03
TS23: neural retina Moderate Regionally restricted euxassay_009164_03
Specimen euxassay_009164_04: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: brain Moderate Regionally restricted euxassay_009164_04
TS23: spinal cord Moderate Regionally restricted euxassay_009164_04
TS23: cerebral cortex marginal layer Strong Regionally restricted euxassay_009164_04
TS23: midbrain mantle layer Strong Single cells euxassay_009164_04
TS23: pons mantle layer Strong Regionally restricted euxassay_009164_04
TS23: medulla oblongata basal plate mantle layer Strong Regionally restricted euxassay_009164_04
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_009164_04
TS23: rest of cerebellum mantle layer Strong Regionally restricted euxassay_009164_04
TS23: medulla oblongata alar plate mantle layer Strong Regionally restricted euxassay_009164_04
TS23: trigeminal ganglion Strong Regionally restricted euxassay_009164_04
TS23: facial ganglion Strong Regionally restricted euxassay_009164_04
TS23: glossopharyngeal ganglion Strong Regionally restricted euxassay_009164_04
TS23: vestibulo-cochlear ganglion Strong Regionally restricted euxassay_009164_04
TS23: vagus ganglion Strong Regionally restricted euxassay_009164_04
TS23: dorsal root ganglion Strong Regionally restricted euxassay_009164_04
Specimen euxassay_009164_05: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: brain Moderate Regionally restricted euxassay_009164_05
TS23: spinal cord Moderate Regionally restricted euxassay_009164_05
TS23: cerebral cortex marginal layer Strong Regionally restricted euxassay_009164_05
TS23: medulla oblongata basal plate mantle layer Strong Regionally restricted euxassay_009164_05
TS23: pons mantle layer Strong Regionally restricted euxassay_009164_05
TS23: basal columns Strong Regionally restricted euxassay_009164_05
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_009164_05
TS23: diencephalon lateral wall mantle layer Moderate Regionally restricted euxassay_009164_05
TS23: midbrain mantle layer Moderate Regionally restricted euxassay_009164_05
TS23: medulla oblongata alar plate mantle layer Strong Regionally restricted euxassay_009164_05
TS23: rest of cerebellum mantle layer Strong Regionally restricted euxassay_009164_05
TS23: vestibulo-cochlear ganglion Strong Regionally restricted euxassay_009164_05
TS23: trigeminal ganglion Strong Regionally restricted euxassay_009164_05
TS23: dorsal root ganglion Strong Regionally restricted euxassay_009164_05
TS23: cervical ganglion Strong Regionally restricted euxassay_009164_05
Specimen euxassay_009164_06: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: brain Moderate Regionally restricted euxassay_009164_06
TS23: spinal cord Moderate Regionally restricted euxassay_009164_06
TS23: cerebral cortex marginal layer Strong Regionally restricted euxassay_009164_06
TS23: medulla oblongata basal plate mantle layer Strong Regionally restricted euxassay_009164_06
TS23: basal columns Strong Regionally restricted euxassay_009164_06
TS23: diencephalon lateral wall mantle layer Moderate Regionally restricted euxassay_009164_06
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_009164_06
TS23: midbrain mantle layer Moderate Regionally restricted euxassay_009164_06
TS23: midbrain tegmentum Strong Regionally restricted euxassay_009164_06
TS23: medulla oblongata alar plate mantle layer Moderate Regionally restricted euxassay_009164_06
TS23: rest of cerebellum mantle layer Moderate Regionally restricted euxassay_009164_06
TS23: pons mantle layer Moderate Regionally restricted euxassay_009164_06
TS23: trigeminal ganglion Strong Regionally restricted euxassay_009164_06
TS23: dorsal root ganglion Strong Regionally restricted euxassay_009164_06
TS23: cervico-thoracic ganglion Strong Regionally restricted euxassay_009164_06
Specimen euxassay_009164_07: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: brain Moderate Regionally restricted euxassay_009164_07
TS23: spinal cord Moderate Regionally restricted euxassay_009164_07
TS23: cerebral cortex marginal layer Strong Regionally restricted euxassay_009164_07
TS23: medulla oblongata basal plate mantle layer Strong Regionally restricted euxassay_009164_07
TS23: basal columns Strong Regionally restricted euxassay_009164_07
TS23: diencephalon lateral wall mantle layer Moderate Regionally restricted euxassay_009164_07
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_009164_07
TS23: midbrain mantle layer Moderate Regionally restricted euxassay_009164_07
TS23: midbrain tegmentum Strong Regionally restricted euxassay_009164_07
TS23: pons mantle layer Strong Regionally restricted euxassay_009164_07
TS23: rest of cerebellum mantle layer Moderate Regionally restricted euxassay_009164_07
TS23: trigeminal nerve Strong Regionally restricted euxassay_009164_07
TS23: dorsal root ganglion Strong Regionally restricted euxassay_009164_07
TS23: thoracic ganglion Strong Regionally restricted euxassay_009164_07
Specimen euxassay_009164_08: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: brain Moderate Regionally restricted euxassay_009164_08
TS23: spinal cord Moderate Regionally restricted euxassay_009164_08
TS23: cerebral cortex marginal layer Strong Regionally restricted euxassay_009164_08
TS23: midbrain tegmentum Strong Spotted euxassay_009164_08
TS23: medulla oblongata basal plate mantle layer Strong Regionally restricted euxassay_009164_08
TS23: basal columns Strong Regionally restricted euxassay_009164_08
TS23: diencephalon lateral wall mantle layer Moderate Regionally restricted euxassay_009164_08
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_009164_08
TS23: midbrain mantle layer Moderate Regionally restricted euxassay_009164_08
TS23: rest of cerebellum mantle layer Moderate Regionally restricted euxassay_009164_08
TS23: pons mantle layer Strong Regionally restricted euxassay_009164_08
TS23: trigeminal nerve Strong Regionally restricted euxassay_009164_08
TS23: dorsal root ganglion Strong Regionally restricted euxassay_009164_08
TS23: thoracic ganglion Strong Regionally restricted euxassay_009164_08
Specimen euxassay_009164_09: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: brain Moderate Regionally restricted euxassay_009164_09
TS23: spinal cord Moderate Regionally restricted euxassay_009164_09
TS23: cerebral cortex marginal layer Strong Regionally restricted euxassay_009164_09
TS23: midbrain tegmentum Strong Spotted euxassay_009164_09
TS23: basal columns Strong Regionally restricted euxassay_009164_09
TS23: diencephalon lateral wall mantle layer Moderate Regionally restricted euxassay_009164_09
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_009164_09
TS23: midbrain mantle layer Moderate Regionally restricted euxassay_009164_09
TS23: pons mantle layer Strong Regionally restricted euxassay_009164_09
TS23: medulla oblongata basal plate mantle layer Strong Regionally restricted euxassay_009164_09
TS23: medulla oblongata alar plate mantle layer Strong Regionally restricted euxassay_009164_09
TS23: thoracic ganglion Strong Regionally restricted euxassay_009164_09
TS23: cervico-thoracic ganglion Strong Regionally restricted euxassay_009164_09
Specimen euxassay_009164_10: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: brain Moderate Regionally restricted euxassay_009164_10
TS23: spinal cord Moderate Regionally restricted euxassay_009164_10
TS23: cerebral cortex marginal layer Strong Regionally restricted euxassay_009164_10
TS23: basal columns Strong Regionally restricted euxassay_009164_10
TS23: diencephalon lateral wall mantle layer Moderate Regionally restricted euxassay_009164_10
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_009164_10
TS23: midbrain mantle layer Strong Regionally restricted euxassay_009164_10
TS23: pons mantle layer Strong Regionally restricted euxassay_009164_10
TS23: rest of cerebellum mantle layer Strong Regionally restricted euxassay_009164_10
TS23: medulla oblongata basal plate mantle layer Strong Regionally restricted euxassay_009164_10
TS23: medulla oblongata alar plate mantle layer Strong Regionally restricted euxassay_009164_10
TS23: dorsal root ganglion Strong Regionally restricted euxassay_009164_10
TS23: thoracic ganglion Strong Regionally restricted euxassay_009164_10
TS23: cervico-thoracic ganglion Strong Regionally restricted euxassay_009164_10
TS23: tongue Strong Spotted euxassay_009164_10
Specimen euxassay_009164_11: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: brain Moderate Regionally restricted euxassay_009164_11
TS23: cerebral cortex marginal layer Strong Regionally restricted euxassay_009164_11
TS23: midbrain mantle layer Strong Single cells euxassay_009164_11
TS23: medulla oblongata basal plate mantle layer Strong Regionally restricted euxassay_009164_11
TS23: diencephalon lateral wall mantle layer Moderate Regionally restricted euxassay_009164_11
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_009164_11
TS23: pons mantle layer Strong Regionally restricted euxassay_009164_11
TS23: rest of cerebellum mantle layer Strong Regionally restricted euxassay_009164_11
TS23: medulla oblongata alar plate mantle layer Strong Regionally restricted euxassay_009164_11
TS23: dorsal root ganglion Strong Regionally restricted euxassay_009164_11
TS23: cervico-thoracic ganglion Strong Regionally restricted euxassay_009164_11
Specimen euxassay_009164_12: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: brain Moderate Regionally restricted euxassay_009164_12
TS23: cerebral cortex marginal layer Strong Regionally restricted euxassay_009164_12
TS23: midbrain mantle layer Strong Single cells euxassay_009164_12
TS23: medulla oblongata basal plate mantle layer Strong Regionally restricted euxassay_009164_12
TS23: diencephalon lateral wall mantle layer Moderate Regionally restricted euxassay_009164_12
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_009164_12
TS23: medulla oblongata alar plate mantle layer Strong Regionally restricted euxassay_009164_12
TS23: rest of cerebellum mantle layer Strong Regionally restricted euxassay_009164_12
TS23: pons mantle layer Strong Regionally restricted euxassay_009164_12
TS23: dorsal root ganglion Strong Regionally restricted euxassay_009164_12
TS23: cervical ganglion Strong Regionally restricted euxassay_009164_12
Specimen euxassay_009164_13: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: brain Moderate Regionally restricted euxassay_009164_13
TS23: cerebral cortex marginal layer Strong Regionally restricted euxassay_009164_13
TS23: pons mantle layer Strong Regionally restricted euxassay_009164_13
TS23: diencephalon lateral wall mantle layer Moderate Regionally restricted euxassay_009164_13
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_009164_13
TS23: midbrain mantle layer Moderate Regionally restricted euxassay_009164_13
TS23: medulla oblongata alar plate mantle layer Strong Regionally restricted euxassay_009164_13
TS23: rest of cerebellum mantle layer Strong Regionally restricted euxassay_009164_13
TS23: medulla oblongata basal plate mantle layer Strong Regionally restricted euxassay_009164_13
TS23: vagus ganglion Strong Regionally restricted euxassay_009164_13
TS23: vestibulo-cochlear ganglion Strong Regionally restricted euxassay_009164_13
TS23: cervical ganglion Strong Regionally restricted euxassay_009164_13
TS23: tongue Strong Spotted euxassay_009164_13
Specimen euxassay_009164_14: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: brain Moderate Regionally restricted euxassay_009164_14
TS23: cerebral cortex marginal layer Strong Regionally restricted euxassay_009164_14
TS23: diencephalon lateral wall mantle layer Moderate Regionally restricted euxassay_009164_14
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_009164_14
TS23: medulla oblongata alar plate mantle layer Strong Regionally restricted euxassay_009164_14
TS23: medulla oblongata basal plate marginal layer Strong Regionally restricted euxassay_009164_14
TS23: rest of cerebellum mantle layer Strong Regionally restricted euxassay_009164_14
TS23: pons mantle layer Strong Regionally restricted euxassay_009164_14
TS23: trigeminal nerve Strong Regionally restricted euxassay_009164_14
TS23: glossopharyngeal ganglion Strong Regionally restricted euxassay_009164_14
TS23: trigeminal ganglion Strong Regionally restricted euxassay_009164_14
TS23: vestibulo-cochlear ganglion Strong Regionally restricted euxassay_009164_14
Specimen euxassay_009164_15: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: brain Moderate Regionally restricted euxassay_009164_15
TS23: cerebral cortex marginal layer Strong Regionally restricted euxassay_009164_15
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_009164_15
TS23: rest of cerebellum mantle layer Strong Regionally restricted euxassay_009164_15
TS23: pons mantle layer Strong Regionally restricted euxassay_009164_15
TS23: trigeminal ganglion Strong Regionally restricted euxassay_009164_15
TS23: facial ganglion Strong Regionally restricted euxassay_009164_15
Specimen euxassay_009164_16: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: brain Moderate Regionally restricted euxassay_009164_16
TS23: cerebral cortex marginal layer Strong Regionally restricted euxassay_009164_16
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_009164_16
TS23: rest of cerebellum mantle layer Moderate Regionally restricted euxassay_009164_16
TS23: pons mantle layer Moderate Regionally restricted euxassay_009164_16
TS23: trigeminal ganglion Strong Regionally restricted euxassay_009164_16
TS23: facial ganglion Strong Regionally restricted euxassay_009164_16
Specimen euxassay_009164_17: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: brain Moderate Regionally restricted euxassay_009164_17
TS23: cerebral cortex marginal layer Strong Regionally restricted euxassay_009164_17
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_009164_17
TS23: trigeminal ganglion Strong Regionally restricted euxassay_009164_17
TS23: facial ganglion Strong Regionally restricted euxassay_009164_17
Specimen euxassay_009164_18: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: brain Moderate Regionally restricted euxassay_009164_18
TS23: cerebral cortex marginal layer Strong Regionally restricted euxassay_009164_18
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_009164_18
TS23: trigeminal ganglion Strong Regionally restricted euxassay_009164_18
Specimen euxassay_009164_19: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: brain Moderate Regionally restricted euxassay_009164_19
TS23: cerebral cortex marginal layer Strong Regionally restricted euxassay_009164_19
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_009164_19
Specimen euxassay_009164_20: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: brain Moderate Regionally restricted euxassay_009164_20
TS23: cerebral cortex marginal layer Strong Regionally restricted euxassay_009164_20
TS23: neural retina Strong Regionally restricted euxassay_009164_20
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
05/07/2024
MGI 6.23 		The Jackson Laboratory