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Gene Expression Data
Assay Details
Assay
Reference: J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
Assay type: RNA in situ
MGI Accession ID: MGI:4823969
Gene symbol: Coch
Gene name: cochlin
Probe: MGC clone 54694
Probe preparation: Antisense labelled with digoxigenin RNA
Visualized with: Alkaline phosphatase
Assay notes: Cryosections of fresh frozen material were fixed in 4% paraformaldehyde for 20 min. before further processing. A tyramide-biotin/streptavidin amplification step was included in the in situ hybridization procedure.
Results
Specimen euxassay_004668_01: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: cochlea Strong Regionally restricted euxassay_004668_01
Specimen euxassay_004668_02: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: cochlea Strong Regionally restricted euxassay_004668_02
Specimen euxassay_004668_03: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: cochlea Strong Regionally restricted euxassay_004668_03
TS23: rest of cerebellum mantle layer Moderate Regionally restricted euxassay_004668_03
TS23: trigeminal ganglion Weak Regionally restricted euxassay_004668_03
Specimen euxassay_004668_04: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: cochlea Strong Regionally restricted euxassay_004668_04
TS23: vibrissa Moderate Regionally restricted euxassay_004668_04
TS23: rest of cerebellum mantle layer Moderate Regionally restricted euxassay_004668_04
TS23: trigeminal ganglion Weak Regionally restricted euxassay_004668_04
Specimen euxassay_004668_05: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: cochlea Strong Regionally restricted euxassay_004668_05
TS23: vibrissa Moderate Regionally restricted euxassay_004668_05
TS23: rest of cerebellum mantle layer Moderate Regionally restricted euxassay_004668_05
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_004668_05
Specimen euxassay_004668_06: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: cochlea Strong Regionally restricted euxassay_004668_06
TS23: vibrissa Moderate Regionally restricted euxassay_004668_06
TS23: rest of cerebellum mantle layer Moderate Regionally restricted euxassay_004668_06
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_004668_06
Specimen euxassay_004668_07: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: cochlea Strong Regionally restricted euxassay_004668_07
TS23: medulla oblongata basal plate mantle layer Moderate Regionally restricted euxassay_004668_07
TS23: pons mantle layer Moderate Regionally restricted euxassay_004668_07
TS23: rest of cerebellum mantle layer Moderate Regionally restricted euxassay_004668_07
TS23: vagus ganglion Moderate Regionally restricted euxassay_004668_07
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_004668_07
Specimen euxassay_004668_08: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: medulla oblongata basal plate mantle layer Moderate Regionally restricted euxassay_004668_08 facial motor nucleus
TS23: pons mantle layer Moderate Regionally restricted euxassay_004668_08
TS23: vagus ganglion Moderate Regionally restricted euxassay_004668_08
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_004668_08
Specimen euxassay_004668_09: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: olfactory epithelium Moderate Regionally restricted euxassay_004668_09
TS23: medulla oblongata basal plate mantle layer Moderate Regionally restricted euxassay_004668_09 facial motor nucleus
Specimen euxassay_004668_10: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: olfactory epithelium Moderate Regionally restricted euxassay_004668_10
TS23: medulla oblongata basal plate mantle layer Moderate Regionally restricted euxassay_004668_10 facial motor nucleus
TS23: ventral grey horn Weak Regionally restricted euxassay_004668_10
Specimen euxassay_004668_11: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: olfactory epithelium Weak Regionally restricted euxassay_004668_11
TS23: medulla oblongata basal plate mantle layer Moderate Regionally restricted euxassay_004668_11 facial motor nucleus
TS23: ventral grey horn Moderate Regionally restricted euxassay_004668_11
Specimen euxassay_004668_12: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: ventral grey horn Moderate Regionally restricted euxassay_004668_12
Specimen euxassay_004668_13: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: olfactory epithelium Weak Regionally restricted euxassay_004668_13
Specimen euxassay_004668_14: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: olfactory epithelium Weak Regionally restricted euxassay_004668_14
TS23: ventral grey horn Moderate Regionally restricted euxassay_004668_14
Specimen euxassay_004668_15: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: olfactory epithelium Weak Regionally restricted euxassay_004668_15
TS23: medulla oblongata basal plate mantle layer Moderate Regionally restricted euxassay_004668_15 facial motor nucleus
TS23: ventral grey horn Moderate Regionally restricted euxassay_004668_15
Specimen euxassay_004668_16: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: olfactory epithelium Weak Regionally restricted euxassay_004668_16
TS23: medulla oblongata basal plate mantle layer Moderate Regionally restricted euxassay_004668_16 facial motor nucleus
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_004668_16
Specimen euxassay_004668_17: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: olfactory epithelium Weak Regionally restricted euxassay_004668_17
TS23: pons mantle layer Moderate Regionally restricted euxassay_004668_17
TS23: medulla oblongata basal plate mantle layer Moderate Regionally restricted euxassay_004668_17
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_004668_17
TS23: vagus ganglion Moderate Regionally restricted euxassay_004668_17
Specimen euxassay_004668_18: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: cochlea Strong Regionally restricted euxassay_004668_18
TS23: vibrissa Weak Regionally restricted euxassay_004668_18
TS23: medulla oblongata basal plate mantle layer Moderate Regionally restricted euxassay_004668_18
TS23: trigeminal ganglion Weak Regionally restricted euxassay_004668_18
Specimen euxassay_004668_19: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: cochlea Strong Regionally restricted euxassay_004668_19
TS23: vibrissa Weak Regionally restricted euxassay_004668_19
TS23: rest of cerebellum mantle layer Moderate Regionally restricted euxassay_004668_19
TS23: trigeminal ganglion Weak Regionally restricted euxassay_004668_19
Specimen euxassay_004668_20: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: cochlea Strong Regionally restricted euxassay_004668_20
TS23: vibrissa Weak Regionally restricted euxassay_004668_20
TS23: rest of cerebellum mantle layer Moderate Regionally restricted euxassay_004668_20
TS23: trigeminal ganglion Weak Regionally restricted euxassay_004668_20
Specimen euxassay_004668_21: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: cochlea Strong Regionally restricted euxassay_004668_21
Specimen euxassay_004668_22: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: cochlea Strong Regionally restricted euxassay_004668_22
Specimen euxassay_004668_23: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: cochlea Strong Regionally restricted euxassay_004668_23
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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04/30/2024
MGI 6.23 		The Jackson Laboratory