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Gene Expression Data
Assay Details
Assay
Reference: J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
Assay type: RNA in situ
MGI Accession ID: MGI:4823860
Gene symbol: Chrna7
Gene name: cholinergic receptor, nicotinic, alpha polypeptide 7
Probe: T35142
Probe preparation: Antisense labelled with digoxigenin RNA
Visualized with: Alkaline phosphatase
Assay notes: Cryosections of fresh frozen material were fixed in 4% paraformaldehyde for 20 min. before further processing. A tyramide-biotin/streptavidin amplification step was included in the in situ hybridization procedure.
Results
Specimen euxassay_008298_01: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: cerebral cortex marginal layer Moderate Regionally restricted euxassay_008298_01
Specimen euxassay_008298_02: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: cerebral cortex marginal layer Moderate Regionally restricted euxassay_008298_02
Specimen euxassay_008298_03: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: cerebral cortex marginal layer Moderate Regionally restricted euxassay_008298_03
Specimen euxassay_008298_04: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: cerebral cortex marginal layer Moderate Regionally restricted euxassay_008298_04
Specimen euxassay_008298_05: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: cerebral cortex marginal layer Moderate Regionally restricted euxassay_008298_05
TS23: trigeminal nerve Strong Regionally restricted euxassay_008298_05
Specimen euxassay_008298_06: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: cerebral cortex marginal layer Moderate Regionally restricted euxassay_008298_06
TS23: trigeminal nerve Strong Regionally restricted euxassay_008298_06
TS23: pons mantle layer Strong Regionally restricted euxassay_008298_06 trigeminal motor nucleus
Specimen euxassay_008298_07: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: cerebral cortex marginal layer Moderate Regionally restricted euxassay_008298_07
TS23: trigeminal nerve Strong Regionally restricted euxassay_008298_07
TS23: medulla oblongata basal plate mantle layer Strong Single cells euxassay_008298_07
TS23: pons mantle layer Strong Single cells euxassay_008298_07
Specimen euxassay_008298_08: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: cerebral cortex marginal layer Moderate Regionally restricted euxassay_008298_08
TS23: trigeminal nerve Strong Regionally restricted euxassay_008298_08
TS23: medulla oblongata basal plate mantle layer Weak Single cells euxassay_008298_08
TS23: pons mantle layer Weak Single cells euxassay_008298_08
Specimen euxassay_008298_09: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: cerebral cortex marginal layer Moderate Regionally restricted euxassay_008298_09
TS23: cervical ganglion Strong Regionally restricted euxassay_008298_09
TS23: medulla oblongata basal plate mantle layer Strong Single cells euxassay_008298_09
TS23: pons mantle layer Strong Single cells euxassay_008298_09
Specimen euxassay_008298_10: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: cerebral cortex marginal layer Moderate Regionally restricted euxassay_008298_10
TS23: trigeminal nerve Strong Regionally restricted euxassay_008298_10
TS23: cervico-thoracic ganglion Strong Regionally restricted euxassay_008298_10
TS23: medulla oblongata basal plate mantle layer Strong Single cells euxassay_008298_10
Specimen euxassay_008298_11: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: cerebral cortex marginal layer Moderate Regionally restricted euxassay_008298_11
TS23: trigeminal nerve Strong Regionally restricted euxassay_008298_11
TS23: tongue Strong Spotted euxassay_008298_11
TS23: medulla oblongata basal plate mantle layer Strong Single cells euxassay_008298_11
Specimen euxassay_008298_12: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: cerebral cortex marginal layer Moderate Regionally restricted euxassay_008298_12
TS23: tongue Strong Spotted euxassay_008298_12
TS23: medulla oblongata basal plate mantle layer Moderate Single cells euxassay_008298_12
Specimen euxassay_008298_13: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: cerebral cortex marginal layer Moderate Regionally restricted euxassay_008298_13
TS23: thoracic ganglion Moderate Regionally restricted euxassay_008298_13
TS23: medulla oblongata basal plate mantle layer Strong Single cells euxassay_008298_13
TS23: pons mantle layer Strong Single cells euxassay_008298_13
Specimen euxassay_008298_14: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: cerebral cortex marginal layer Moderate Regionally restricted euxassay_008298_14
TS23: tongue Strong Spotted euxassay_008298_14
TS23: thoracic ganglion Moderate Regionally restricted euxassay_008298_14
TS23: medulla oblongata basal plate mantle layer Strong Single cells euxassay_008298_14
Specimen euxassay_008298_15: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: cerebral cortex marginal layer Moderate Regionally restricted euxassay_008298_15
TS23: thoracic ganglion Moderate Regionally restricted euxassay_008298_15
TS23: medulla oblongata basal plate mantle layer Strong Single cells euxassay_008298_15
Specimen euxassay_008298_16: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: cerebral cortex marginal layer Moderate Regionally restricted euxassay_008298_16
TS23: trigeminal nerve Strong Regionally restricted euxassay_008298_16
TS23: cervical ganglion Strong Regionally restricted euxassay_008298_16
TS23: cervico-thoracic ganglion Strong Regionally restricted euxassay_008298_16
TS23: medulla oblongata basal plate mantle layer Strong Single cells euxassay_008298_16
TS23: pons mantle layer Strong Single cells euxassay_008298_16
Specimen euxassay_008298_17: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: cerebral cortex marginal layer Moderate Regionally restricted euxassay_008298_17
TS23: trigeminal nerve Strong Regionally restricted euxassay_008298_17
TS23: cervical ganglion Strong Regionally restricted euxassay_008298_17
TS23: medulla oblongata basal plate mantle layer Strong Single cells euxassay_008298_17
TS23: pons mantle layer Strong Single cells euxassay_008298_17
Specimen euxassay_008298_18: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: cerebral cortex marginal layer Moderate Regionally restricted euxassay_008298_18
TS23: trigeminal nerve Strong Regionally restricted euxassay_008298_18
TS23: pons mantle layer Strong Regionally restricted euxassay_008298_18 trigeminal motor nucleus
Specimen euxassay_008298_19: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: cerebral cortex marginal layer Moderate Regionally restricted euxassay_008298_19
TS23: trigeminal nerve Moderate Regionally restricted euxassay_008298_19
Specimen euxassay_008298_20: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: cerebral cortex marginal layer Moderate Regionally restricted euxassay_008298_20
Specimen euxassay_008298_21: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: cerebral cortex marginal layer Moderate Regionally restricted euxassay_008298_21
Specimen euxassay_008298_22: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: cerebral cortex marginal layer Moderate Regionally restricted euxassay_008298_22
Specimen euxassay_008298_23: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: cerebral cortex marginal layer Moderate Regionally restricted euxassay_008298_23
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
05/14/2024
MGI 6.23 		The Jackson Laboratory