About   Help   FAQ
Gene Expression Data
Assay Details
Assay
Reference: J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
Assay type: RNA in situ
MGI Accession ID: MGI:4823772
Gene symbol: Cdh8
Gene name: cadherin 8
Probe: T30648
Probe preparation: Antisense labelled with digoxigenin RNA
Visualized with: Alkaline phosphatase
Assay notes: Cryosections of fresh frozen material were fixed in 4% paraformaldehyde for 20 min. before further processing. A tyramide-biotin/streptavidin amplification step was included in the in situ hybridization procedure.
Results
Specimen euxassay_009793_01: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_009793_01
Specimen euxassay_009793_02: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_009793_02
TS23: cerebral cortex mantle layer Moderate Regionally restricted euxassay_009793_02
Specimen euxassay_009793_03: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_009793_03
TS23: cerebral cortex mantle layer Moderate Regionally restricted euxassay_009793_03
TS23: trigeminal ganglion Weak Regionally restricted euxassay_009793_03
Specimen euxassay_009793_04: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_009793_04
TS23: cerebral cortex mantle layer Moderate Regionally restricted euxassay_009793_04
TS23: rest of cerebellum mantle layer Moderate Regionally restricted euxassay_009793_04
TS23: trigeminal ganglion Weak Regionally restricted euxassay_009793_04
TS23: facial ganglion Weak Regionally restricted euxassay_009793_04
Specimen euxassay_009793_05: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_009793_05
TS23: cerebral cortex mantle layer Moderate Regionally restricted euxassay_009793_05
TS23: rest of cerebellum mantle layer Moderate Regionally restricted euxassay_009793_05
TS23: trigeminal ganglion Weak Spotted euxassay_009793_05
Specimen euxassay_009793_06: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: cerebral cortex mantle layer Moderate Regionally restricted euxassay_009793_06
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_009793_06
TS23: pons mantle layer Moderate Regionally restricted euxassay_009793_06
TS23: rest of cerebellum mantle layer Moderate Regionally restricted euxassay_009793_06
TS23: trigeminal ganglion Weak Spotted euxassay_009793_06
Specimen euxassay_009793_07: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: cerebral cortex mantle layer Moderate Regionally restricted euxassay_009793_07
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_009793_07
TS23: diencephalon lateral wall mantle layer Moderate Regionally restricted euxassay_009793_07
TS23: midbrain mantle layer Moderate Regionally restricted euxassay_009793_07
TS23: pons mantle layer Moderate Regionally restricted euxassay_009793_07
TS23: rest of cerebellum mantle layer Moderate Regionally restricted euxassay_009793_07
TS23: medulla oblongata basal plate mantle layer Moderate Regionally restricted euxassay_009793_07
TS23: medulla oblongata alar plate mantle layer Moderate Regionally restricted euxassay_009793_07
TS23: dorsal root ganglion Weak Spotted euxassay_009793_07
TS23: trigeminal ganglion Weak Spotted euxassay_009793_07
TS23: glossopharyngeal ganglion Weak Spotted euxassay_009793_07
TS23: nose Weak Regionally restricted euxassay_009793_07
Specimen euxassay_009793_08: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: midbrain mantle layer Moderate Regionally restricted euxassay_009793_08
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_009793_08
TS23: diencephalon lateral wall mantle layer Moderate Regionally restricted euxassay_009793_08
TS23: cerebral cortex mantle layer Moderate Regionally restricted euxassay_009793_08
TS23: medulla oblongata alar plate mantle layer Moderate Regionally restricted euxassay_009793_08
TS23: medulla oblongata basal plate mantle layer Moderate Regionally restricted euxassay_009793_08
TS23: rest of cerebellum mantle layer Moderate Regionally restricted euxassay_009793_08
TS23: pons mantle layer Moderate Regionally restricted euxassay_009793_08
TS23: dorsal root ganglion Weak Spotted euxassay_009793_08
TS23: trigeminal ganglion Weak Spotted euxassay_009793_08
TS23: nose Weak Regionally restricted euxassay_009793_08
Specimen euxassay_009793_09: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: diencephalon lateral wall mantle layer Moderate Regionally restricted euxassay_009793_09
TS23: cerebral cortex mantle layer Moderate Regionally restricted euxassay_009793_09
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_009793_09
TS23: midbrain mantle layer Moderate Regionally restricted euxassay_009793_09
TS23: medulla oblongata alar plate mantle layer Moderate Regionally restricted euxassay_009793_09
TS23: medulla oblongata basal plate mantle layer Moderate Regionally restricted euxassay_009793_09
TS23: rest of cerebellum mantle layer Moderate Regionally restricted euxassay_009793_09
TS23: pons mantle layer Moderate Regionally restricted euxassay_009793_09
TS23: dorsal root ganglion Weak Spotted euxassay_009793_09
TS23: trigeminal ganglion Weak Spotted euxassay_009793_09
TS23: nose Weak Regionally restricted euxassay_009793_09
Specimen euxassay_009793_10: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: diencephalon lateral wall mantle layer Moderate Regionally restricted euxassay_009793_10
TS23: cerebral cortex mantle layer Moderate Regionally restricted euxassay_009793_10
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_009793_10
TS23: midbrain mantle layer Moderate Regionally restricted euxassay_009793_10
TS23: medulla oblongata alar plate mantle layer Moderate Regionally restricted euxassay_009793_10
TS23: medulla oblongata basal plate mantle layer Moderate Regionally restricted euxassay_009793_10
TS23: rest of cerebellum mantle layer Moderate Regionally restricted euxassay_009793_10
TS23: pons mantle layer Moderate Regionally restricted euxassay_009793_10
TS23: spinal cord mantle layer Moderate Regionally restricted euxassay_009793_10
TS23: dorsal root ganglion Weak Spotted euxassay_009793_10
TS23: thoracic ganglion Weak Regionally restricted euxassay_009793_10
Specimen euxassay_009793_11: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: diencephalon lateral wall mantle layer Moderate Regionally restricted euxassay_009793_11
TS23: cerebral cortex mantle layer Moderate Regionally restricted euxassay_009793_11
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_009793_11
TS23: midbrain mantle layer Moderate Regionally restricted euxassay_009793_11
TS23: medulla oblongata alar plate mantle layer Moderate Regionally restricted euxassay_009793_11
TS23: medulla oblongata basal plate mantle layer Moderate Regionally restricted euxassay_009793_11
TS23: rest of cerebellum mantle layer Moderate Regionally restricted euxassay_009793_11
TS23: pons mantle layer Moderate Regionally restricted euxassay_009793_11
TS23: spinal cord mantle layer Moderate Regionally restricted euxassay_009793_11
TS23: thymus primordium Moderate Spotted euxassay_009793_11
TS23: dorsal root ganglion Weak Spotted euxassay_009793_11
Specimen euxassay_009793_12: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: diencephalon lateral wall mantle layer Moderate Regionally restricted euxassay_009793_12
TS23: cerebral cortex mantle layer Moderate Regionally restricted euxassay_009793_12
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_009793_12
TS23: midbrain mantle layer Moderate Regionally restricted euxassay_009793_12
TS23: medulla oblongata basal plate mantle layer Moderate Regionally restricted euxassay_009793_12
TS23: medulla oblongata alar plate mantle layer Moderate Regionally restricted euxassay_009793_12
TS23: rest of cerebellum mantle layer Moderate Regionally restricted euxassay_009793_12
TS23: pons mantle layer Moderate Regionally restricted euxassay_009793_12
TS23: spinal cord mantle layer Moderate Regionally restricted euxassay_009793_12
TS23: thymus primordium Moderate Spotted euxassay_009793_12
TS23: thoracic ganglion Weak Regionally restricted euxassay_009793_12
Specimen euxassay_009793_13: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: diencephalon lateral wall mantle layer Moderate Regionally restricted euxassay_009793_13
TS23: cerebral cortex mantle layer Moderate Regionally restricted euxassay_009793_13
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_009793_13
TS23: midbrain mantle layer Moderate Regionally restricted euxassay_009793_13
TS23: medulla oblongata alar plate mantle layer Moderate Regionally restricted euxassay_009793_13
TS23: medulla oblongata basal plate mantle layer Moderate Regionally restricted euxassay_009793_13
TS23: rest of cerebellum mantle layer Moderate Regionally restricted euxassay_009793_13
TS23: pons mantle layer Moderate Regionally restricted euxassay_009793_13
TS23: spinal cord mantle layer Moderate Regionally restricted euxassay_009793_13
TS23: thymus primordium Moderate Spotted euxassay_009793_13
TS23: thoracic ganglion Weak Regionally restricted euxassay_009793_13
Specimen euxassay_009793_14: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: diencephalon lateral wall mantle layer Moderate Regionally restricted euxassay_009793_14
TS23: cerebral cortex mantle layer Moderate Regionally restricted euxassay_009793_14
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_009793_14
TS23: midbrain mantle layer Moderate Regionally restricted euxassay_009793_14
TS23: medulla oblongata alar plate mantle layer Moderate Regionally restricted euxassay_009793_14
TS23: medulla oblongata basal plate mantle layer Moderate Regionally restricted euxassay_009793_14
TS23: rest of cerebellum mantle layer Moderate Regionally restricted euxassay_009793_14
TS23: pons mantle layer Moderate Regionally restricted euxassay_009793_14
TS23: spinal cord mantle layer Moderate Regionally restricted euxassay_009793_14
TS23: thymus primordium Moderate Spotted euxassay_009793_14
TS23: thoracic ganglion Weak Regionally restricted euxassay_009793_14
Specimen euxassay_009793_15: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: diencephalon lateral wall mantle layer Moderate Regionally restricted euxassay_009793_15
TS23: cerebral cortex mantle layer Moderate Regionally restricted euxassay_009793_15
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_009793_15
TS23: midbrain mantle layer Moderate Regionally restricted euxassay_009793_15
TS23: medulla oblongata alar plate mantle layer Moderate Regionally restricted euxassay_009793_15
TS23: medulla oblongata basal plate mantle layer Moderate Regionally restricted euxassay_009793_15
TS23: rest of cerebellum mantle layer Moderate Regionally restricted euxassay_009793_15
TS23: pons mantle layer Moderate Regionally restricted euxassay_009793_15
TS23: spinal cord mantle layer Moderate Regionally restricted euxassay_009793_15
TS23: thymus primordium Moderate Spotted euxassay_009793_15
TS23: thoracic ganglion Weak Regionally restricted euxassay_009793_15
Specimen euxassay_009793_16: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: diencephalon lateral wall mantle layer Moderate Regionally restricted euxassay_009793_16
TS23: cerebral cortex mantle layer Moderate Regionally restricted euxassay_009793_16
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_009793_16
TS23: midbrain mantle layer Moderate Regionally restricted euxassay_009793_16
TS23: medulla oblongata alar plate mantle layer Moderate Regionally restricted euxassay_009793_16
TS23: medulla oblongata basal plate mantle layer Moderate Regionally restricted euxassay_009793_16
TS23: rest of cerebellum mantle layer Moderate Regionally restricted euxassay_009793_16
TS23: pons mantle layer Moderate Regionally restricted euxassay_009793_16
TS23: dorsal root ganglion Weak Spotted euxassay_009793_16
Specimen euxassay_009793_17: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: diencephalon lateral wall mantle layer Moderate Regionally restricted euxassay_009793_17
TS23: cerebral cortex mantle layer Moderate Regionally restricted euxassay_009793_17
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_009793_17
TS23: midbrain mantle layer Moderate Regionally restricted euxassay_009793_17
TS23: medulla oblongata alar plate mantle layer Moderate Regionally restricted euxassay_009793_17
TS23: medulla oblongata basal plate mantle layer Moderate Regionally restricted euxassay_009793_17
TS23: rest of cerebellum mantle layer Moderate Regionally restricted euxassay_009793_17
TS23: pons mantle layer Moderate Regionally restricted euxassay_009793_17
TS23: nose Weak Regionally restricted euxassay_009793_17
Specimen euxassay_009793_18: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: diencephalon lateral wall mantle layer Moderate Regionally restricted euxassay_009793_18
TS23: cerebral cortex mantle layer Moderate Regionally restricted euxassay_009793_18
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_009793_18
TS23: midbrain mantle layer Moderate Regionally restricted euxassay_009793_18
TS23: rest of cerebellum mantle layer Moderate Regionally restricted euxassay_009793_18
TS23: pons mantle layer Moderate Regionally restricted euxassay_009793_18
TS23: medulla oblongata alar plate mantle layer Moderate Regionally restricted euxassay_009793_18
TS23: medulla oblongata basal plate mantle layer Moderate Regionally restricted euxassay_009793_18
Specimen euxassay_009793_19: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: diencephalon lateral wall mantle layer Moderate Regionally restricted euxassay_009793_19
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_009793_19
TS23: cerebral cortex mantle layer Moderate Regionally restricted euxassay_009793_19
TS23: midbrain mantle layer Moderate Regionally restricted euxassay_009793_19
TS23: rest of cerebellum mantle layer Moderate Regionally restricted euxassay_009793_19
TS23: pons mantle layer Moderate Regionally restricted euxassay_009793_19
Specimen euxassay_009793_20: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: cerebral cortex mantle layer Moderate Regionally restricted euxassay_009793_20
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_009793_20
TS23: rest of cerebellum mantle layer Moderate Regionally restricted euxassay_009793_20
TS23: trigeminal ganglion Weak Spotted euxassay_009793_20
TS23: nose Weak Regionally restricted euxassay_009793_20
Specimen euxassay_009793_21: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: cerebral cortex mantle layer Moderate Regionally restricted euxassay_009793_21
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_009793_21
TS23: rest of cerebellum mantle layer Moderate Regionally restricted euxassay_009793_21
TS23: trigeminal ganglion Weak Spotted euxassay_009793_21
Specimen euxassay_009793_22: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: cerebral cortex mantle layer Moderate Regionally restricted euxassay_009793_22
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_009793_22
TS23: trigeminal ganglion Weak Spotted euxassay_009793_22
Specimen euxassay_009793_23: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: cerebral cortex mantle layer Weak Regionally restricted euxassay_009793_23
TS23: telencephalon mantle layer Weak Regionally restricted euxassay_009793_23
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
Warranty Disclaimer, Privacy Notice, Licensing, & Copyright
Send questions and comments to User Support. 		last database update
04/30/2024
MGI 6.23 		The Jackson Laboratory