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Gene Expression Data
Assay Details
Assay
Reference: J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
Assay type: RNA in situ
MGI Accession ID: MGI:4823761
Gene symbol: Cdh1
Gene name: cadherin 1
Probe: T36138
Probe preparation: Antisense labelled with digoxigenin RNA
Visualized with: Alkaline phosphatase
Assay notes: Cryosections of fresh frozen material were fixed in 4% paraformaldehyde for 20 min. before further processing. A tyramide-biotin/streptavidin amplification step was included in the in situ hybridization procedure.
Results
Specimen euxassay_012131_01: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: vertebral axis musculature Strong Regionally restricted euxassay_012131_01
TS23: diaphragm Strong Regionally restricted euxassay_012131_01
TS23: stomach Strong Regionally restricted euxassay_012131_01
TS23: retina Strong Regionally restricted euxassay_012131_01
TS23: brain Strong Regionally restricted euxassay_012131_01
TS23: upper arm muscle Moderate Regionally restricted euxassay_012131_01
Specimen euxassay_012131_02: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: vertebral axis musculature Strong Regionally restricted euxassay_012131_02
TS23: diaphragm Strong Regionally restricted euxassay_012131_02
TS23: stomach Strong Regionally restricted euxassay_012131_02
TS23: retina Strong Regionally restricted euxassay_012131_02
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_012131_02
TS23: facial ganglion Moderate Regionally restricted euxassay_012131_02
TS23: brain Strong Regionally restricted euxassay_012131_02
TS23: lower leg rest of mesenchyme Moderate Regionally restricted euxassay_012131_02
TS23: upper arm muscle Moderate Regionally restricted euxassay_012131_02
Specimen euxassay_012131_03: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: vertebral axis musculature Strong Regionally restricted euxassay_012131_03
TS23: diaphragm Strong Regionally restricted euxassay_012131_03
TS23: heart ventricle Strong Regionally restricted euxassay_012131_03
TS23: stomach Strong Regionally restricted euxassay_012131_03
TS23: retina Strong Regionally restricted euxassay_012131_03
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_012131_03
TS23: facial ganglion Moderate Regionally restricted euxassay_012131_03
TS23: vestibulo-cochlear ganglion Moderate Regionally restricted euxassay_012131_03
TS23: brain Strong Regionally restricted euxassay_012131_03
TS23: lower leg rest of mesenchyme Moderate Regionally restricted euxassay_012131_03
Specimen euxassay_012131_04: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: vertebral axis musculature Strong Regionally restricted euxassay_012131_04
TS23: diaphragm Strong Regionally restricted euxassay_012131_04
TS23: heart ventricle Strong Regionally restricted euxassay_012131_04
TS23: stomach Strong Regionally restricted euxassay_012131_04
TS23: retina Strong Regionally restricted euxassay_012131_04
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_012131_04
TS23: vestibulo-cochlear ganglion Moderate Regionally restricted euxassay_012131_04
TS23: glossopharyngeal ganglion Moderate Regionally restricted euxassay_012131_04
TS23: facial ganglion Moderate Regionally restricted euxassay_012131_04
TS23: dorsal root ganglion Moderate Regionally restricted euxassay_012131_04
TS23: brain Strong Regionally restricted euxassay_012131_04
TS23: upper leg muscle Moderate Regionally restricted euxassay_012131_04
TS23: lower leg rest of mesenchyme Moderate Regionally restricted euxassay_012131_04
Specimen euxassay_012131_05: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: diaphragm Strong Regionally restricted euxassay_012131_05
TS23: vertebral axis musculature Strong Regionally restricted euxassay_012131_05
TS23: heart ventricle Strong Regionally restricted euxassay_012131_05
TS23: stomach Strong Regionally restricted euxassay_012131_05
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_012131_05
TS23: vestibulo-cochlear ganglion Moderate Regionally restricted euxassay_012131_05
TS23: facial ganglion Moderate Regionally restricted euxassay_012131_05
TS23: dorsal root ganglion Moderate Regionally restricted euxassay_012131_05
TS23: brain Strong Regionally restricted euxassay_012131_05
TS23: spinal cord Strong Regionally restricted euxassay_012131_05
TS23: upper leg muscle Moderate Regionally restricted euxassay_012131_05
Specimen euxassay_012131_06: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: diaphragm Strong Regionally restricted euxassay_012131_06
TS23: vertebral axis musculature Strong Regionally restricted euxassay_012131_06
TS23: heart ventricle Strong Regionally restricted euxassay_012131_06
TS23: stomach Strong Regionally restricted euxassay_012131_06
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_012131_06
TS23: facial ganglion Moderate Regionally restricted euxassay_012131_06
TS23: vestibulo-cochlear ganglion Moderate Regionally restricted euxassay_012131_06
TS23: dorsal root ganglion Moderate Regionally restricted euxassay_012131_06
TS23: brain Strong Regionally restricted euxassay_012131_06
TS23: spinal cord Strong Regionally restricted euxassay_012131_06
TS23: upper leg muscle Moderate Regionally restricted euxassay_012131_06
Specimen euxassay_012131_07: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: diaphragm Strong Regionally restricted euxassay_012131_07
TS23: vertebral axis musculature Strong Regionally restricted euxassay_012131_07
TS23: heart ventricle Strong Regionally restricted euxassay_012131_07
TS23: stomach Strong Regionally restricted euxassay_012131_07
TS23: midgut Strong Regionally restricted euxassay_012131_07
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_012131_07
TS23: dorsal root ganglion Moderate Regionally restricted euxassay_012131_07
TS23: brain Strong Regionally restricted euxassay_012131_07
TS23: spinal cord Strong Regionally restricted euxassay_012131_07
TS23: upper leg muscle Moderate Regionally restricted euxassay_012131_07
Specimen euxassay_012131_08: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: diaphragm Strong Regionally restricted euxassay_012131_08
TS23: vertebral axis musculature Strong Regionally restricted euxassay_012131_08
TS23: heart ventricle Strong Regionally restricted euxassay_012131_08
TS23: stomach Strong Regionally restricted euxassay_012131_08
TS23: midgut Strong Regionally restricted euxassay_012131_08
TS23: olfactory epithelium Strong Regionally restricted euxassay_012131_08
TS23: dorsal root ganglion Moderate Regionally restricted euxassay_012131_08
TS23: brain Strong Regionally restricted euxassay_012131_08
TS23: spinal cord Strong Regionally restricted euxassay_012131_08
TS23: upper leg muscle Moderate Regionally restricted euxassay_012131_08
Specimen euxassay_012131_09: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: diaphragm Strong Regionally restricted euxassay_012131_09
TS23: vertebral axis musculature Strong Regionally restricted euxassay_012131_09
TS23: heart ventricle Strong Regionally restricted euxassay_012131_09
TS23: midgut Strong Regionally restricted euxassay_012131_09
TS23: stomach Strong Regionally restricted euxassay_012131_09
TS23: esophagus Strong Regionally restricted euxassay_012131_09
TS23: olfactory epithelium Strong Regionally restricted euxassay_012131_09
TS23: dorsal root ganglion Moderate Regionally restricted euxassay_012131_09
TS23: brain Strong Regionally restricted euxassay_012131_09
TS23: spinal cord Strong Regionally restricted euxassay_012131_09
TS23: upper leg muscle Moderate Regionally restricted euxassay_012131_09
Specimen euxassay_012131_10: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: diaphragm Strong Regionally restricted euxassay_012131_10
TS23: vertebral axis musculature Strong Regionally restricted euxassay_012131_10
TS23: heart ventricle Strong Regionally restricted euxassay_012131_10
TS23: midgut Strong Regionally restricted euxassay_012131_10
TS23: esophagus Strong Regionally restricted euxassay_012131_10
TS23: tongue extrinsic muscle Strong Regionally restricted euxassay_012131_10
TS23: olfactory epithelium Strong Regionally restricted euxassay_012131_10
TS23: dorsal root ganglion Moderate Regionally restricted euxassay_012131_10
TS23: brain Strong Regionally restricted euxassay_012131_10
TS23: spinal cord Strong Regionally restricted euxassay_012131_10
TS23: upper leg muscle Moderate Regionally restricted euxassay_012131_10
Specimen euxassay_012131_11: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: diaphragm Strong Regionally restricted euxassay_012131_11
TS23: vertebral axis musculature Strong Regionally restricted euxassay_012131_11
TS23: heart ventricle Strong Regionally restricted euxassay_012131_11
TS23: midgut Strong Regionally restricted euxassay_012131_11
TS23: tongue extrinsic muscle Strong Regionally restricted euxassay_012131_11
TS23: olfactory epithelium Strong Regionally restricted euxassay_012131_11
TS23: dorsal root ganglion Moderate Regionally restricted euxassay_012131_11
TS23: brain Strong Regionally restricted euxassay_012131_11
TS23: spinal cord Strong Regionally restricted euxassay_012131_11
Specimen euxassay_012131_12: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: diaphragm Strong Regionally restricted euxassay_012131_12
TS23: vertebral axis musculature Strong Regionally restricted euxassay_012131_12
TS23: heart ventricle Strong Regionally restricted euxassay_012131_12
TS23: midgut Strong Regionally restricted euxassay_012131_12
TS23: tongue extrinsic muscle Strong Regionally restricted euxassay_012131_12
TS23: tongue intrinsic muscle Strong Regionally restricted euxassay_012131_12
TS23: olfactory epithelium Strong Regionally restricted euxassay_012131_12
TS23: vomeronasal organ Strong Regionally restricted euxassay_012131_12
TS23: dorsal root ganglion Moderate Regionally restricted euxassay_012131_12
TS23: brain Strong Regionally restricted euxassay_012131_12
TS23: spinal cord Strong Regionally restricted euxassay_012131_12
Specimen euxassay_012131_13: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: diaphragm Strong Regionally restricted euxassay_012131_13
TS23: vertebral axis musculature Strong Regionally restricted euxassay_012131_13
TS23: heart ventricle Strong Regionally restricted euxassay_012131_13
TS23: midgut Strong Regionally restricted euxassay_012131_13
TS23: tongue extrinsic muscle Strong Regionally restricted euxassay_012131_13
TS23: dorsal root ganglion Moderate Regionally restricted euxassay_012131_13
TS23: brain Strong Regionally restricted euxassay_012131_13
TS23: spinal cord Strong Regionally restricted euxassay_012131_13
Specimen euxassay_012131_14: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: diaphragm Strong Regionally restricted euxassay_012131_14
TS23: vertebral axis musculature Strong Regionally restricted euxassay_012131_14
TS23: heart ventricle Strong Regionally restricted euxassay_012131_14
TS23: midgut Strong Regionally restricted euxassay_012131_14
TS23: olfactory epithelium Strong Regionally restricted euxassay_012131_14
TS23: vagus ganglion Moderate Regionally restricted euxassay_012131_14
TS23: brain Strong Regionally restricted euxassay_012131_14
TS23: spinal cord Strong Regionally restricted euxassay_012131_14
Specimen euxassay_012131_15: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: diaphragm Strong Regionally restricted euxassay_012131_15
TS23: vertebral axis musculature Strong Regionally restricted euxassay_012131_15
TS23: heart ventricle Strong Regionally restricted euxassay_012131_15
TS23: midgut Strong Regionally restricted euxassay_012131_15
TS23: olfactory epithelium Strong Regionally restricted euxassay_012131_15
TS23: vomeronasal organ Strong Regionally restricted euxassay_012131_15
TS23: glossopharyngeal ganglion Moderate Regionally restricted euxassay_012131_15
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_012131_15
TS23: vestibulo-cochlear ganglion Moderate Regionally restricted euxassay_012131_15
TS23: brain Strong Regionally restricted euxassay_012131_15
Specimen euxassay_012131_16: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: diaphragm Strong Regionally restricted euxassay_012131_16
TS23: vertebral axis musculature Strong Regionally restricted euxassay_012131_16
TS23: midgut Strong Regionally restricted euxassay_012131_16
TS23: olfactory epithelium Strong Regionally restricted euxassay_012131_16
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_012131_16
TS23: vestibulo-cochlear ganglion Moderate Regionally restricted euxassay_012131_16
TS23: brain Strong Regionally restricted euxassay_012131_16
Specimen euxassay_012131_17: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: diaphragm Strong Regionally restricted euxassay_012131_17
TS23: vertebral axis musculature Strong Regionally restricted euxassay_012131_17
TS23: midgut Strong Regionally restricted euxassay_012131_17
TS23: olfactory epithelium Strong Regionally restricted euxassay_012131_17
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_012131_17
TS23: brain Strong Regionally restricted euxassay_012131_17
TS23: upper arm muscle Moderate Regionally restricted euxassay_012131_17
Specimen euxassay_012131_18: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: diaphragm Strong Regionally restricted euxassay_012131_18
TS23: vertebral axis musculature Strong Regionally restricted euxassay_012131_18
TS23: midgut Strong Regionally restricted euxassay_012131_18
TS23: olfactory epithelium Strong Regionally restricted euxassay_012131_18
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_012131_18
TS23: facial ganglion Moderate Regionally restricted euxassay_012131_18
TS23: brain Strong Regionally restricted euxassay_012131_18
TS23: upper arm muscle Moderate Regionally restricted euxassay_012131_18
Specimen euxassay_012131_19: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: diaphragm Strong Regionally restricted euxassay_012131_19
TS23: vertebral axis musculature Strong Regionally restricted euxassay_012131_19
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_012131_19
TS23: facial ganglion Moderate Regionally restricted euxassay_012131_19
TS23: brain Strong Regionally restricted euxassay_012131_19
TS23: upper leg muscle Moderate Regionally restricted euxassay_012131_19
TS23: upper arm muscle Moderate Regionally restricted euxassay_012131_19
Specimen euxassay_012131_20: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: diaphragm Strong Regionally restricted euxassay_012131_20
TS23: vertebral axis musculature Strong Regionally restricted euxassay_012131_20
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_012131_20
TS23: brain Strong Regionally restricted euxassay_012131_20
TS23: upper leg muscle Moderate Regionally restricted euxassay_012131_20
TS23: upper arm muscle Moderate Regionally restricted euxassay_012131_20
Specimen euxassay_012131_21: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: diaphragm Strong Regionally restricted euxassay_012131_21
TS23: vertebral axis musculature Strong Regionally restricted euxassay_012131_21
TS23: retina Strong Regionally restricted euxassay_012131_21
TS23: brain Strong Regionally restricted euxassay_012131_21
TS23: upper leg muscle Moderate Regionally restricted euxassay_012131_21
TS23: upper arm muscle Moderate Regionally restricted euxassay_012131_21
Specimen euxassay_012131_22: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: diaphragm Strong Regionally restricted euxassay_012131_22
TS23: vertebral axis musculature Strong Regionally restricted euxassay_012131_22
TS23: brain Strong Regionally restricted euxassay_012131_22
TS23: upper leg muscle Moderate Regionally restricted euxassay_012131_22
TS23: upper arm muscle Moderate Regionally restricted euxassay_012131_22
Specimen euxassay_012131_23: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: diaphragm Strong Regionally restricted euxassay_012131_23
TS23: vertebral axis musculature Strong Regionally restricted euxassay_012131_23
TS23: brain Strong Regionally restricted euxassay_012131_23
TS23: upper leg muscle Moderate Regionally restricted euxassay_012131_23
TS23: upper arm muscle Moderate Regionally restricted euxassay_012131_23
Specimen euxassay_012131_24: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: diaphragm Strong Regionally restricted euxassay_012131_24
TS23: vertebral axis musculature Strong Regionally restricted euxassay_012131_24
TS23: brain Strong Regionally restricted euxassay_012131_24
TS23: upper leg muscle Moderate Regionally restricted euxassay_012131_24
TS23: upper arm muscle Moderate Regionally restricted euxassay_012131_24
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Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
05/14/2024
MGI 6.23 		The Jackson Laboratory