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Gene Expression Data
Assay Details
Assay
Reference: J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
Assay type: RNA in situ
MGI Accession ID: MGI:4823699
Gene symbol: Ccl2
Gene name: C-C motif chemokine ligand 2
Probe: IMAGE clone 573898
Probe preparation: Antisense labelled with digoxigenin RNA
Visualized with: Alkaline phosphatase
Assay notes: Cryosections of fresh frozen material were fixed in 4% paraformaldehyde for 20 min. before further processing. A tyramide-biotin/streptavidin amplification step was included in the in situ hybridization procedure.
Results
Specimen euxassay_000140_01: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: retina Moderate Regionally restricted euxassay_000140_01
Specimen euxassay_000140_02: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: retina Moderate Regionally restricted euxassay_000140_02
Specimen euxassay_000140_04: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Moderate Uniform euxassay_000140_04
TS23: telencephalon Moderate Regionally restricted euxassay_000140_04
TS23: corpus striatum Moderate Regionally restricted euxassay_000140_04
TS23: cerebral cortex Moderate Regionally restricted euxassay_000140_04
Specimen euxassay_000140_05: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon marginal layer Strong Uniform euxassay_000140_05
TS23: trigeminal ganglion Strong Uniform euxassay_000140_05
TS23: vibrissa Moderate Regionally restricted euxassay_000140_05
Specimen euxassay_000140_06: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon Strong Uniform euxassay_000140_06
TS23: telencephalon marginal layer Strong Uniform euxassay_000140_06
TS23: central nervous system ganglion Strong Uniform euxassay_000140_06
TS23: cranial ganglion Strong Uniform euxassay_000140_06
TS23: central nervous system nerve Strong Uniform euxassay_000140_06
TS23: metencephalon alar plate Moderate Uniform euxassay_000140_06
TS23: metencephalon basal plate Moderate Uniform euxassay_000140_06
Specimen euxassay_000140_07: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon Strong Uniform euxassay_000140_07
TS23: telencephalon marginal layer Strong Uniform euxassay_000140_07
TS23: metencephalon alar plate Moderate Uniform euxassay_000140_07
TS23: trigeminal ganglion Strong Uniform euxassay_000140_07
TS23: glossopharyngeal ganglion Strong Uniform euxassay_000140_07
TS23: facial ganglion Strong Uniform euxassay_000140_07
TS23: lung Strong Single cells euxassay_000140_07
TS23: heart Moderate Single cells euxassay_000140_07
TS23: heart ventricle Moderate Single cells euxassay_000140_07
TS23: metencephalon basal plate Moderate Uniform euxassay_000140_07
Specimen euxassay_000140_08: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: heart Moderate Single cells euxassay_000140_08
TS23: heart ventricle Moderate Single cells euxassay_000140_08
TS23: lung Strong Regionally restricted euxassay_000140_08
TS23: telencephalon marginal layer Strong Uniform euxassay_000140_08
TS23: olfactory cortex marginal layer Strong Uniform euxassay_000140_08
TS23: cerebral cortex marginal layer Strong Uniform euxassay_000140_08
TS23: metencephalon alar plate Moderate Uniform euxassay_000140_08
TS23: metencephalon basal plate Moderate Uniform euxassay_000140_08
TS23: glossopharyngeal ganglion Strong Spotted euxassay_000140_08
TS23: facial ganglion Strong Spotted euxassay_000140_08
TS23: vagus ganglion Strong Spotted euxassay_000140_08
TS23: vestibulo-cochlear ganglion Strong Spotted euxassay_000140_08
TS23: trigeminal ganglion Strong Spotted euxassay_000140_08
TS23: trigeminal nerve mandibular division Strong Spotted euxassay_000140_08
TS23: trigeminal nerve ophthalmic division Strong Spotted euxassay_000140_08
TS23: trigeminal nerve maxillary division Strong Spotted euxassay_000140_08
TS23: glossopharyngeal nerve Strong Spotted euxassay_000140_08
TS23: facial nerve Strong Spotted euxassay_000140_08
TS23: optic nerve Strong Spotted euxassay_000140_08
Specimen euxassay_000140_09: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Strong Uniform euxassay_000140_09
TS23: trigeminal nerve ophthalmic division Strong Uniform euxassay_000140_09
TS23: trigeminal nerve maxillary division Strong Uniform euxassay_000140_09
TS23: cerebral cortex ventricular layer Strong Uniform euxassay_000140_09
TS23: telencephalon marginal layer Strong Uniform euxassay_000140_09
TS23: olfactory cortex marginal layer Strong Uniform euxassay_000140_09
Specimen euxassay_000140_11: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: metencephalon basal plate Strong Uniform euxassay_000140_11
TS23: cerebral cortex marginal layer Strong Uniform euxassay_000140_11
TS23: olfactory cortex marginal layer Strong Uniform euxassay_000140_11
TS23: telencephalon marginal layer Strong Uniform euxassay_000140_11
TS23: trigeminal nerve mandibular division Strong Single cells euxassay_000140_11
TS23: spinal cord Strong Uniform euxassay_000140_11
TS23: spinal component of peripheral nervous system Strong Uniform euxassay_000140_11
TS23: dorsal root ganglion Strong Uniform euxassay_000140_11
TS23: lung Moderate Regionally restricted euxassay_000140_11
Specimen euxassay_000140_12: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: lung Moderate Regionally restricted euxassay_000140_12
TS23: spinal cord Moderate Uniform euxassay_000140_12
TS23: cerebral cortex marginal layer Moderate Uniform euxassay_000140_12
TS23: olfactory cortex marginal layer Moderate Uniform euxassay_000140_12
TS23: telencephalon marginal layer Moderate Uniform euxassay_000140_12
Specimen euxassay_000140_14: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: olfactory cortex marginal layer Strong Uniform euxassay_000140_14
TS23: telencephalon marginal layer Strong Uniform euxassay_000140_14
TS23: cerebral cortex marginal layer Strong Uniform euxassay_000140_14
TS23: spinal cord Strong Uniform euxassay_000140_14
TS23: dorsal root ganglion Strong Uniform euxassay_000140_14
Specimen euxassay_000140_15: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: nucleus pulposus Moderate Uniform euxassay_000140_15
TS23: spinal cord Moderate Uniform euxassay_000140_15
TS23: olfactory cortex marginal layer Strong Uniform euxassay_000140_15
TS23: telencephalon mantle layer Strong Uniform euxassay_000140_15
TS23: cerebral cortex marginal layer Strong Uniform euxassay_000140_15
TS23: dorsal root ganglion Moderate Uniform euxassay_000140_15
Specimen euxassay_000140_16: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: dorsal root ganglion Moderate Uniform euxassay_000140_16
TS23: spinal cord Moderate Uniform euxassay_000140_16
TS23: midbrain marginal layer Strong Uniform euxassay_000140_16
TS23: olfactory cortex marginal layer Strong Uniform euxassay_000140_16
TS23: cerebral cortex marginal layer Strong Uniform euxassay_000140_16
TS23: telencephalon marginal layer Strong Uniform euxassay_000140_16
Specimen euxassay_000140_17: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: dorsal root ganglion Strong Uniform euxassay_000140_17
TS23: spinal cord Moderate Uniform euxassay_000140_17
TS23: midbrain marginal layer Strong Uniform euxassay_000140_17
TS23: olfactory cortex marginal layer Strong Uniform euxassay_000140_17
TS23: telencephalon marginal layer Strong Uniform euxassay_000140_17
TS23: cerebral cortex marginal layer Strong Uniform euxassay_000140_17
Specimen euxassay_000140_18: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: cerebral cortex marginal layer Strong Uniform euxassay_000140_18
TS23: olfactory cortex marginal layer Strong Uniform euxassay_000140_18
TS23: midbrain marginal layer Strong Uniform euxassay_000140_18
TS23: dorsal root ganglion Strong Uniform euxassay_000140_18
TS23: spinal cord Strong Uniform euxassay_000140_18
TS23: trigeminal ganglion Moderate Uniform euxassay_000140_18
TS23: lung Weak Regionally restricted euxassay_000140_18
Specimen euxassay_000140_19: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Moderate Uniform euxassay_000140_19
TS23: vagus ganglion Moderate Uniform euxassay_000140_19
TS23: telencephalon marginal layer Strong Uniform euxassay_000140_19
TS23: midbrain marginal layer Strong Uniform euxassay_000140_19
Specimen euxassay_000140_20: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Strong Uniform euxassay_000140_20
TS23: vagus ganglion Strong Uniform euxassay_000140_20
TS23: glossopharyngeal ganglion Strong Uniform euxassay_000140_20
TS23: cerebral cortex marginal layer Moderate Uniform euxassay_000140_20
TS23: telencephalon mantle layer Moderate Uniform euxassay_000140_20
TS23: olfactory cortex marginal layer Moderate Uniform euxassay_000140_20
TS23: dorsal root ganglion Strong Uniform euxassay_000140_20
TS23: lung Moderate Regionally restricted euxassay_000140_20
Specimen euxassay_000140_21: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: lung Absent euxassay_000140_21
TS23: vagus ganglion Moderate Uniform euxassay_000140_21
TS23: trigeminal ganglion Moderate Uniform euxassay_000140_21
TS23: glossopharyngeal ganglion Moderate Uniform euxassay_000140_21
TS23: facial ganglion Moderate Uniform euxassay_000140_21
TS23: cerebral cortex marginal layer Moderate Uniform euxassay_000140_21
TS23: telencephalon marginal layer Moderate Uniform euxassay_000140_21
TS23: olfactory cortex marginal layer Moderate Uniform euxassay_000140_21
Specimen euxassay_000140_22: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon Moderate Uniform euxassay_000140_22
TS23: telencephalon marginal layer Moderate Uniform euxassay_000140_22
TS23: cranial ganglion Moderate Uniform euxassay_000140_22
TS23: trigeminal ganglion Moderate Uniform euxassay_000140_22
Specimen euxassay_000140_23: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Moderate Uniform euxassay_000140_23
TS23: cerebral cortex marginal layer Moderate Uniform euxassay_000140_23
TS23: optic nerve Moderate Uniform euxassay_000140_23
TS23: trigeminal nerve ophthalmic division Moderate Uniform euxassay_000140_23
TS23: retina Strong Regionally restricted euxassay_000140_23
Specimen euxassay_000140_24: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Strong Uniform euxassay_000140_24
TS23: lung Moderate Regionally restricted euxassay_000140_24
TS23: telencephalon Moderate Uniform euxassay_000140_24
TS23: cerebral cortex marginal layer Moderate Uniform euxassay_000140_24
TS23: retina Strong Regionally restricted euxassay_000140_24
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
05/07/2024
MGI 6.23 		The Jackson Laboratory