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Gene Expression Data
Assay Details
Assay
Reference: J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
Assay type: RNA in situ
MGI Accession ID: MGI:4823695
Gene symbol: Cchcr1
Gene name: coiled-coil alpha-helical rod protein 1
Probe: T31315
Probe preparation: Antisense labelled with digoxigenin RNA
Visualized with: Alkaline phosphatase
Assay notes: Cryosections of fresh frozen material were fixed in 4% paraformaldehyde for 20 min. before further processing. A tyramide-biotin/streptavidin amplification step was included in the in situ hybridization procedure.
Results
Specimen euxassay_012419_01: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon ventricular layer Weak Uniform euxassay_012419_01
Specimen euxassay_012419_02: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon ventricular layer Weak Uniform euxassay_012419_02
Specimen euxassay_012419_03: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon ventricular layer Weak Uniform euxassay_012419_03
Specimen euxassay_012419_04: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon ventricular layer Weak Uniform euxassay_012419_04
Specimen euxassay_012419_05: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon ventricular layer Weak Uniform euxassay_012419_05
Specimen euxassay_012419_06: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon ventricular layer Weak Uniform euxassay_012419_06
Specimen euxassay_012419_07: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon ventricular layer Weak Uniform euxassay_012419_07
Specimen euxassay_012419_08: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon ventricular layer Weak Uniform euxassay_012419_08
TS23: olfactory cortex ventricular layer Weak Uniform euxassay_012419_08
Specimen euxassay_012419_09: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: olfactory cortex ventricular layer Weak Uniform euxassay_012419_09
TS23: telencephalon ventricular layer Weak Uniform euxassay_012419_09
TS23: midbrain ventricular layer Weak Regionally restricted euxassay_012419_09
TS23: inferior colliculus Present euxassay_012419_09
Specimen euxassay_012419_10: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: telencephalon ventricular layer Weak Uniform euxassay_012419_10
TS23: midbrain ventricular layer Weak Regionally restricted euxassay_012419_10
TS23: inferior colliculus Present euxassay_012419_10
TS23: hypothalamus ventricular layer Weak Regionally restricted euxassay_012419_10
Specimen euxassay_012419_11: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: midbrain ventricular layer Weak Regionally restricted euxassay_012419_11
TS23: inferior colliculus Present euxassay_012419_11
TS23: hypothalamus ventricular layer Weak Regionally restricted euxassay_012419_11
TS23: diencephalon lateral wall ventricular layer Weak Regionally restricted euxassay_012419_11
Specimen euxassay_012419_12: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: telencephalon ventricular layer Weak Uniform euxassay_012419_12
TS23: midbrain ventricular layer Weak Regionally restricted euxassay_012419_12
TS23: inferior colliculus Present euxassay_012419_12
TS23: hypothalamus ventricular layer Weak Regionally restricted euxassay_012419_12
TS23: diencephalon lateral wall ventricular layer Weak Regionally restricted euxassay_012419_12
Specimen euxassay_012419_13: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: olfactory cortex ventricular layer Weak Uniform euxassay_012419_13
TS23: telencephalon ventricular layer Weak Uniform euxassay_012419_13
TS23: midbrain ventricular layer Weak Regionally restricted euxassay_012419_13
TS23: inferior colliculus Present euxassay_012419_13
TS23: diencephalon lateral wall ventricular layer Weak Regionally restricted euxassay_012419_13
TS23: hypothalamus ventricular layer Weak Regionally restricted euxassay_012419_13
Specimen euxassay_012419_14: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: telencephalon ventricular layer Weak Uniform euxassay_012419_14
TS23: olfactory cortex ventricular layer Weak Uniform euxassay_012419_14
TS23: midbrain ventricular layer Weak Regionally restricted euxassay_012419_14
TS23: inferior colliculus Present euxassay_012419_14
TS23: hypothalamus ventricular layer Weak Regionally restricted euxassay_012419_14
Specimen euxassay_012419_15: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: telencephalon ventricular layer Weak Uniform euxassay_012419_15
TS23: midbrain ventricular layer Weak Regionally restricted euxassay_012419_15
TS23: inferior colliculus Present euxassay_012419_15
Specimen euxassay_012419_16: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: telencephalon ventricular layer Weak Uniform euxassay_012419_16
TS23: midbrain ventricular layer Weak Regionally restricted euxassay_012419_16
TS23: inferior colliculus Present euxassay_012419_16
Specimen euxassay_012419_17: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: telencephalon ventricular layer Weak Uniform euxassay_012419_17
TS23: midbrain ventricular layer Weak Regionally restricted euxassay_012419_17
TS23: inferior colliculus Present euxassay_012419_17
Specimen euxassay_012419_18: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon ventricular layer Weak Uniform euxassay_012419_18
Specimen euxassay_012419_19: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon ventricular layer Weak Uniform euxassay_012419_19
Specimen euxassay_012419_20: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon ventricular layer Weak Uniform euxassay_012419_20
Specimen euxassay_012419_21: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon ventricular layer Weak Uniform euxassay_012419_21
Specimen euxassay_012419_22: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon ventricular layer Weak Uniform euxassay_012419_22
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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05/21/2024
MGI 6.23 		The Jackson Laboratory