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Gene Expression Data
Assay Details
Assay
Reference: J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
Assay type: RNA in situ
MGI Accession ID: MGI:4823533
Gene symbol: C1galt1
Gene name: core 1 synthase, glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase, 1
Probe: MGC clone 76596
Probe preparation: Antisense labelled with digoxigenin RNA
Visualized with: Alkaline phosphatase
Assay notes: Cryosections of fresh frozen material were fixed in 4% paraformaldehyde for 20 min. before further processing. A tyramide-biotin/streptavidin amplification step was included in the in situ hybridization procedure.
Results
Specimen euxassay_013628_01: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: liver lobe Moderate Regionally restricted euxassay_013628_01
TS23: orbito-sphenoid Weak Regionally restricted euxassay_013628_01
TS23: telencephalon ventricular layer Weak Regionally restricted euxassay_013628_01
TS23: vertebral axis musculature Weak Regionally restricted euxassay_013628_01
Specimen euxassay_013628_02: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: liver lobe Moderate Regionally restricted euxassay_013628_02
TS23: mandible Moderate Regionally restricted euxassay_013628_02
TS23: orbito-sphenoid Weak Regionally restricted euxassay_013628_02
TS23: telencephalon ventricular layer Weak Regionally restricted euxassay_013628_02
TS23: vertebral axis musculature Weak Regionally restricted euxassay_013628_02
Specimen euxassay_013628_03: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: liver lobe Moderate Regionally restricted euxassay_013628_03
TS23: mandible Moderate Regionally restricted euxassay_013628_03
TS23: stomach Weak Regionally restricted euxassay_013628_03
TS23: lung Weak Regionally restricted euxassay_013628_03
TS23: orbito-sphenoid Weak Regionally restricted euxassay_013628_03
TS23: telencephalon ventricular layer Weak Regionally restricted euxassay_013628_03
TS23: vertebral axis musculature Weak Regionally restricted euxassay_013628_03
Specimen euxassay_013628_04: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: liver lobe Moderate Regionally restricted euxassay_013628_04
TS23: mandible Moderate Regionally restricted euxassay_013628_04
TS23: stomach Weak Regionally restricted euxassay_013628_04
TS23: lung Weak Regionally restricted euxassay_013628_04
TS23: vibrissa Weak Regionally restricted euxassay_013628_04
TS23: telencephalon ventricular layer Weak Regionally restricted euxassay_013628_04
TS23: vertebral axis musculature Weak Regionally restricted euxassay_013628_04
Specimen euxassay_013628_05: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: liver lobe Moderate Regionally restricted euxassay_013628_05
TS23: maxilla Moderate Regionally restricted euxassay_013628_05
TS23: mandible Moderate Regionally restricted euxassay_013628_05
TS23: stomach Moderate Regionally restricted euxassay_013628_05
TS23: lung Weak Regionally restricted euxassay_013628_05
TS23: vibrissa Weak Regionally restricted euxassay_013628_05
TS23: telencephalon ventricular layer Weak Regionally restricted euxassay_013628_05
TS23: vertebral axis musculature Weak Regionally restricted euxassay_013628_05
Specimen euxassay_013628_06: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: liver lobe Moderate Regionally restricted euxassay_013628_06
TS23: maxilla Moderate Regionally restricted euxassay_013628_06
TS23: mandible Moderate Regionally restricted euxassay_013628_06
TS23: stomach Moderate Regionally restricted euxassay_013628_06
TS23: lung Weak Regionally restricted euxassay_013628_06
TS23: vibrissa Weak Regionally restricted euxassay_013628_06
TS23: telencephalon ventricular layer Weak Regionally restricted euxassay_013628_06
TS23: vertebral axis musculature Weak Regionally restricted euxassay_013628_06
Specimen euxassay_013628_07: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: liver lobe Moderate Regionally restricted euxassay_013628_07
TS23: maxilla Moderate Regionally restricted euxassay_013628_07
TS23: mandible Moderate Regionally restricted euxassay_013628_07
TS23: stomach Moderate Regionally restricted euxassay_013628_07
TS23: lung Weak Regionally restricted euxassay_013628_07
TS23: vibrissa Weak Regionally restricted euxassay_013628_07
TS23: vertebral axis musculature Weak Regionally restricted euxassay_013628_07
Specimen euxassay_013628_08: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: liver lobe Moderate Regionally restricted euxassay_013628_08
TS23: maxilla Moderate Regionally restricted euxassay_013628_08
TS23: mandible Moderate Regionally restricted euxassay_013628_08
TS23: stomach Moderate Regionally restricted euxassay_013628_08
TS23: lung Weak Regionally restricted euxassay_013628_08
TS23: telencephalon ventricular layer Weak Regionally restricted euxassay_013628_08
TS23: vertebral axis musculature Weak Regionally restricted euxassay_013628_08
Specimen euxassay_013628_09: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: liver lobe Moderate Regionally restricted euxassay_013628_09
TS23: stomach Moderate Regionally restricted euxassay_013628_09
TS23: lung Weak Regionally restricted euxassay_013628_09
Specimen euxassay_013628_10: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: liver lobe Moderate Regionally restricted euxassay_013628_10
TS23: thymus primordium Moderate Regionally restricted euxassay_013628_10
TS23: lung Weak Regionally restricted euxassay_013628_10
Specimen euxassay_013628_11: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: liver lobe Moderate Regionally restricted euxassay_013628_11
TS23: thymus primordium Weak Regionally restricted euxassay_013628_11
TS23: lung Weak Regionally restricted euxassay_013628_11
Specimen euxassay_013628_12: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: liver lobe Moderate Regionally restricted euxassay_013628_12
TS23: thymus primordium Weak Regionally restricted euxassay_013628_12
TS23: lung Weak Regionally restricted euxassay_013628_12
Specimen euxassay_013628_13: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: liver lobe Moderate Regionally restricted euxassay_013628_13
TS23: thymus primordium Weak Regionally restricted euxassay_013628_13
TS23: lung Weak Regionally restricted euxassay_013628_13
TS23: bladder Weak Regionally restricted euxassay_013628_13
Specimen euxassay_013628_14: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: liver lobe Moderate Regionally restricted euxassay_013628_14
TS23: thymus primordium Weak Regionally restricted euxassay_013628_14
TS23: rectum lumen Moderate Regionally restricted euxassay_013628_14
TS23: lung Weak Regionally restricted euxassay_013628_14
TS23: bladder Weak Regionally restricted euxassay_013628_14
TS23: urethra Weak Regionally restricted euxassay_013628_14 Originally this result was annotated to a male-specific term, but as the specimen was not sexed, it is likely the data annotator intended to use a non-gender specific term.
Specimen euxassay_013628_15: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: liver lobe Moderate Regionally restricted euxassay_013628_15
TS23: rectum lumen Moderate Regionally restricted euxassay_013628_15
TS23: lung Weak Regionally restricted euxassay_013628_15
TS23: urethra Weak Regionally restricted euxassay_013628_15 Originally this result was annotated to a male-specific term, but as the specimen was not sexed, it is likely the data annotator intended to use a non-gender specific term.
Specimen euxassay_013628_16: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: liver lobe Moderate Regionally restricted euxassay_013628_16
TS23: maxilla Moderate Regionally restricted euxassay_013628_16
TS23: mandible Moderate Regionally restricted euxassay_013628_16
TS23: lung Weak Regionally restricted euxassay_013628_16
TS23: telencephalon ventricular layer Weak Regionally restricted euxassay_013628_16
TS23: vertebral axis musculature Weak Regionally restricted euxassay_013628_16
Specimen euxassay_013628_17: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: liver lobe Moderate Regionally restricted euxassay_013628_17
TS23: maxilla Moderate Regionally restricted euxassay_013628_17
TS23: mandible Moderate Regionally restricted euxassay_013628_17
TS23: lung Weak Regionally restricted euxassay_013628_17
TS23: telencephalon ventricular layer Weak Regionally restricted euxassay_013628_17
TS23: vertebral axis musculature Weak Regionally restricted euxassay_013628_17
Specimen euxassay_013628_18: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: liver lobe Moderate Regionally restricted euxassay_013628_18
TS23: maxilla Moderate Regionally restricted euxassay_013628_18
TS23: mandible Moderate Regionally restricted euxassay_013628_18
TS23: lung Weak Regionally restricted euxassay_013628_18
TS23: telencephalon ventricular layer Weak Regionally restricted euxassay_013628_18
TS23: vertebral axis musculature Weak Regionally restricted euxassay_013628_18
Specimen euxassay_013628_19: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: liver lobe Moderate Regionally restricted euxassay_013628_19
TS23: mandible Moderate Regionally restricted euxassay_013628_19
TS23: maxilla Moderate Regionally restricted euxassay_013628_19
TS23: lung Weak Regionally restricted euxassay_013628_19
TS23: orbito-sphenoid Weak Regionally restricted euxassay_013628_19
TS23: vibrissa Weak Regionally restricted euxassay_013628_19
TS23: telencephalon ventricular layer Weak Regionally restricted euxassay_013628_19
TS23: vertebral axis musculature Weak Regionally restricted euxassay_013628_19
Specimen euxassay_013628_20: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: liver lobe Moderate Regionally restricted euxassay_013628_20
TS23: mandible Weak Regionally restricted euxassay_013628_20
TS23: lung Weak Regionally restricted euxassay_013628_20
TS23: orbito-sphenoid Weak Regionally restricted euxassay_013628_20
TS23: vibrissa Weak Regionally restricted euxassay_013628_20
TS23: telencephalon ventricular layer Weak Regionally restricted euxassay_013628_20
TS23: vertebral axis musculature Weak Regionally restricted euxassay_013628_20
Specimen euxassay_013628_21: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: liver lobe Moderate Regionally restricted euxassay_013628_21
TS23: mandible Weak Regionally restricted euxassay_013628_21
TS23: lung Weak Regionally restricted euxassay_013628_21
TS23: orbito-sphenoid Weak Regionally restricted euxassay_013628_21
TS23: vibrissa Weak Regionally restricted euxassay_013628_21
TS23: vertebral axis musculature Weak Regionally restricted euxassay_013628_21
Specimen euxassay_013628_22: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: liver lobe Moderate Regionally restricted euxassay_013628_22
TS23: lung Weak Regionally restricted euxassay_013628_22
TS23: orbito-sphenoid Weak Regionally restricted euxassay_013628_22
TS23: vibrissa Weak Regionally restricted euxassay_013628_22
TS23: vertebral axis musculature Weak Regionally restricted euxassay_013628_22
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
05/07/2024
MGI 6.23 		The Jackson Laboratory