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Gene Expression Data
Assay Details
Assay
Reference: J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
Assay type: RNA in situ
MGI Accession ID: MGI:4823441
Gene symbol: Bcat1
Gene name: branched chain aminotransferase 1, cytosolic
Probe: T30499
Probe preparation: Antisense labelled with digoxigenin RNA
Visualized with: Alkaline phosphatase
Assay notes: Cryosections of fresh frozen material were fixed in 4% paraformaldehyde for 20 min. before further processing. A tyramide-biotin/streptavidin amplification step was included in the in situ hybridization procedure.
Results
Specimen euxassay_010499_01: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: neural retina Moderate Regionally restricted euxassay_010499_01
TS23: rib Moderate Regionally restricted euxassay_010499_01
TS23: orbito-sphenoid Weak Regionally restricted euxassay_010499_01
TS23: brain Weak Regionally restricted euxassay_010499_01
Specimen euxassay_010499_02: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: neural retina Moderate Regionally restricted euxassay_010499_02
TS23: rib Moderate Regionally restricted euxassay_010499_02
TS23: mandible Weak Regionally restricted euxassay_010499_02
TS23: trigeminal ganglion Moderate Single cells euxassay_010499_02
TS23: orbito-sphenoid Weak Regionally restricted euxassay_010499_02
TS23: brain Weak Regionally restricted euxassay_010499_02
Specimen euxassay_010499_03: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: rib Moderate Regionally restricted euxassay_010499_03
TS23: mandible Weak Regionally restricted euxassay_010499_03
TS23: trigeminal ganglion Moderate Single cells euxassay_010499_03
TS23: facial ganglion Moderate Single cells euxassay_010499_03
TS23: orbito-sphenoid Weak Regionally restricted euxassay_010499_03
TS23: brain Weak Regionally restricted euxassay_010499_03
Specimen euxassay_010499_04: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: rib Moderate Regionally restricted euxassay_010499_04
TS23: mandible Weak Regionally restricted euxassay_010499_04
TS23: trigeminal ganglion Moderate Single cells euxassay_010499_04
TS23: facial ganglion Moderate Single cells euxassay_010499_04
TS23: orbito-sphenoid Weak Regionally restricted euxassay_010499_04
TS23: brain Weak Regionally restricted euxassay_010499_04
Specimen euxassay_010499_05: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: rib Weak Regionally restricted euxassay_010499_05
TS23: turbinate bone primordium Weak Regionally restricted euxassay_010499_05
TS23: mandible Weak Regionally restricted euxassay_010499_05
TS23: trigeminal ganglion Moderate Single cells euxassay_010499_05
TS23: facial ganglion Moderate Single cells euxassay_010499_05
TS23: orbito-sphenoid Weak Regionally restricted euxassay_010499_05
TS23: brain Weak Regionally restricted euxassay_010499_05
TS23: spinal cord Weak Regionally restricted euxassay_010499_05
Specimen euxassay_010499_06: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: rib Weak Regionally restricted euxassay_010499_06
TS23: turbinate bone primordium Weak Regionally restricted euxassay_010499_06
TS23: trigeminal ganglion Moderate Single cells euxassay_010499_06
TS23: orbito-sphenoid Weak Regionally restricted euxassay_010499_06
TS23: brain Weak Regionally restricted euxassay_010499_06
TS23: spinal cord Weak Regionally restricted euxassay_010499_06
Specimen euxassay_010499_07: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: clavicle Moderate Regionally restricted euxassay_010499_07
TS23: turbinate bone primordium Weak Regionally restricted euxassay_010499_07
TS23: mandible Weak Regionally restricted euxassay_010499_07
TS23: trigeminal ganglion Moderate Single cells euxassay_010499_07
TS23: brain Weak Regionally restricted euxassay_010499_07
TS23: spinal cord Weak Regionally restricted euxassay_010499_07
Specimen euxassay_010499_08: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: clavicle Moderate Regionally restricted euxassay_010499_08
TS23: brain Weak Regionally restricted euxassay_010499_08
TS23: spinal cord Weak Regionally restricted euxassay_010499_08
Specimen euxassay_010499_09: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: clavicle Moderate Regionally restricted euxassay_010499_09
TS23: nasal septum Weak Regionally restricted euxassay_010499_09
TS23: lower jaw incisor Weak Regionally restricted euxassay_010499_09
TS23: upper jaw incisor Weak Regionally restricted euxassay_010499_09
TS23: tongue Weak Regionally restricted euxassay_010499_09
TS23: spinal cord Weak Regionally restricted euxassay_010499_09
TS23: brain Weak Regionally restricted euxassay_010499_09
Specimen euxassay_010499_10: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: nasal septum Weak Regionally restricted euxassay_010499_10
TS23: lower jaw incisor Weak Regionally restricted euxassay_010499_10
TS23: tongue Weak Regionally restricted euxassay_010499_10
TS23: spinal cord Weak Regionally restricted euxassay_010499_10
TS23: brain Weak Regionally restricted euxassay_010499_10
Specimen euxassay_010499_11: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: nasal septum Weak Regionally restricted euxassay_010499_11
TS23: lower jaw incisor Weak Regionally restricted euxassay_010499_11
TS23: tongue Weak Regionally restricted euxassay_010499_11
TS23: spinal cord Weak Regionally restricted euxassay_010499_11
TS23: brain Weak Regionally restricted euxassay_010499_11
Specimen euxassay_010499_12: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: nasal septum Weak Regionally restricted euxassay_010499_12
TS23: lower jaw incisor Weak Regionally restricted euxassay_010499_12
TS23: upper jaw incisor Weak Regionally restricted euxassay_010499_12
TS23: tongue Weak Regionally restricted euxassay_010499_12
TS23: spinal cord Weak Regionally restricted euxassay_010499_12
TS23: brain Weak Regionally restricted euxassay_010499_12
Specimen euxassay_010499_13: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: lower jaw incisor Weak Regionally restricted euxassay_010499_13
TS23: upper jaw incisor Weak Regionally restricted euxassay_010499_13
TS23: spinal cord Weak Regionally restricted euxassay_010499_13
TS23: brain Weak Regionally restricted euxassay_010499_13
Specimen euxassay_010499_14: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: turbinate bone primordium Weak Regionally restricted euxassay_010499_14
TS23: spinal cord Weak Regionally restricted euxassay_010499_14
TS23: brain Weak Regionally restricted euxassay_010499_14
Specimen euxassay_010499_15: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: clavicle Moderate Regionally restricted euxassay_010499_15
TS23: turbinate bone primordium Weak Regionally restricted euxassay_010499_15
TS23: mandible Weak Regionally restricted euxassay_010499_15
TS23: trigeminal ganglion Moderate Single cells euxassay_010499_15
TS23: orbito-sphenoid Weak Regionally restricted euxassay_010499_15
TS23: brain Weak Regionally restricted euxassay_010499_15
Specimen euxassay_010499_16: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: rib Weak Regionally restricted euxassay_010499_16
TS23: clavicle Moderate Regionally restricted euxassay_010499_16
TS23: turbinate bone primordium Weak Regionally restricted euxassay_010499_16
TS23: mandible Weak Regionally restricted euxassay_010499_16
TS23: trigeminal ganglion Moderate Single cells euxassay_010499_16
TS23: orbito-sphenoid Weak Regionally restricted euxassay_010499_16
TS23: brain Weak Regionally restricted euxassay_010499_16
Specimen euxassay_010499_17: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: rib Moderate Regionally restricted euxassay_010499_17
TS23: mandible Weak Regionally restricted euxassay_010499_17
TS23: trigeminal ganglion Moderate Single cells euxassay_010499_17
TS23: brain Weak Regionally restricted euxassay_010499_17
Specimen euxassay_010499_18: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: rib Moderate Regionally restricted euxassay_010499_18
TS23: mandible Weak Regionally restricted euxassay_010499_18
TS23: trigeminal ganglion Moderate Single cells euxassay_010499_18
TS23: facial ganglion Moderate Single cells euxassay_010499_18
TS23: orbito-sphenoid Weak Regionally restricted euxassay_010499_18
TS23: brain Weak Regionally restricted euxassay_010499_18
Specimen euxassay_010499_19: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: neural retina Moderate Regionally restricted euxassay_010499_19
TS23: rib Moderate Regionally restricted euxassay_010499_19
TS23: mandible Weak Regionally restricted euxassay_010499_19
TS23: trigeminal ganglion Moderate Single cells euxassay_010499_19
TS23: orbito-sphenoid Weak Regionally restricted euxassay_010499_19
TS23: brain Weak Regionally restricted euxassay_010499_19
Specimen euxassay_010499_20: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: neural retina Moderate Regionally restricted euxassay_010499_20
TS23: trigeminal ganglion Moderate Single cells euxassay_010499_20
TS23: orbito-sphenoid Weak Regionally restricted euxassay_010499_20
TS23: brain Weak Regionally restricted euxassay_010499_20
Specimen euxassay_010499_21: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: neural retina Moderate Regionally restricted euxassay_010499_21
TS23: orbito-sphenoid Moderate Regionally restricted euxassay_010499_21
TS23: brain Weak Regionally restricted euxassay_010499_21
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
05/07/2024
MGI 6.23 		The Jackson Laboratory