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Gene Expression Data
Assay Details
Assay
Reference: J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
Assay type: RNA in situ
MGI Accession ID: MGI:4823347
Gene symbol: Atp5if1
Gene name: ATP synthase inhibitory factor subunit 1
Probe: T30852
Probe preparation: Antisense labelled with digoxigenin RNA
Visualized with: Alkaline phosphatase
Assay notes: Cryosections of fresh frozen material were fixed in 4% paraformaldehyde for 20 min. before further processing. A tyramide-biotin/streptavidin amplification step was included in the in situ hybridization procedure.
Results
Specimen euxassay_010603_01: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: liver lobe Moderate Regionally restricted euxassay_010603_01
Specimen euxassay_010603_02: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: liver lobe Moderate Regionally restricted euxassay_010603_02
TS23: neural retina Moderate Regionally restricted euxassay_010603_02
Specimen euxassay_010603_03: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: liver lobe Moderate Regionally restricted euxassay_010603_03
TS23: mandible Weak Regionally restricted euxassay_010603_03
TS23: neural retina Moderate Regionally restricted euxassay_010603_03
Specimen euxassay_010603_04: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: liver lobe Moderate Regionally restricted euxassay_010603_04
TS23: mandible Weak Regionally restricted euxassay_010603_04
TS23: neural retina Moderate Regionally restricted euxassay_010603_04
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_010603_04
Specimen euxassay_010603_05: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: liver lobe Moderate Regionally restricted euxassay_010603_05
TS23: mandible Weak Regionally restricted euxassay_010603_05
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_010603_05
TS23: orbito-sphenoid Weak Regionally restricted euxassay_010603_05
Specimen euxassay_010603_06: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: liver lobe Moderate Regionally restricted euxassay_010603_06
TS23: maxilla Weak Regionally restricted euxassay_010603_06
TS23: mandible Weak Regionally restricted euxassay_010603_06
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_010603_06
TS23: glossopharyngeal ganglion Moderate Regionally restricted euxassay_010603_06
TS23: submandibular gland primordium Weak Regionally restricted euxassay_010603_06
TS23: orbito-sphenoid Weak Regionally restricted euxassay_010603_06
Specimen euxassay_010603_07: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: liver lobe Moderate Regionally restricted euxassay_010603_07
TS23: maxilla Weak Regionally restricted euxassay_010603_07
TS23: mandible Weak Regionally restricted euxassay_010603_07
TS23: glossopharyngeal ganglion Moderate Regionally restricted euxassay_010603_07
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_010603_07
TS23: dorsal root ganglion Moderate Regionally restricted euxassay_010603_07
TS23: submandibular gland primordium Weak Regionally restricted euxassay_010603_07
TS23: orbito-sphenoid Weak Regionally restricted euxassay_010603_07
Specimen euxassay_010603_08: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: liver lobe Moderate Regionally restricted euxassay_010603_08
TS23: maxilla Weak Regionally restricted euxassay_010603_08
TS23: mandible Weak Regionally restricted euxassay_010603_08
TS23: vagus ganglion Moderate Regionally restricted euxassay_010603_08
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_010603_08
TS23: dorsal root ganglion Weak Regionally restricted euxassay_010603_08
TS23: submandibular gland primordium Weak Regionally restricted euxassay_010603_08
TS23: orbito-sphenoid Weak Regionally restricted euxassay_010603_08
Specimen euxassay_010603_09: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: liver lobe Moderate Regionally restricted euxassay_010603_09
TS23: maxilla Weak Regionally restricted euxassay_010603_09
TS23: mandible Weak Regionally restricted euxassay_010603_09
TS23: trigeminal nerve Moderate Regionally restricted euxassay_010603_09
TS23: dorsal root ganglion Moderate Regionally restricted euxassay_010603_09
TS23: thymus primordium Moderate Regionally restricted euxassay_010603_09
TS23: thyroid gland Weak Regionally restricted euxassay_010603_09
TS23: ventral grey horn Weak Regionally restricted euxassay_010603_09
TS23: medulla oblongata basal plate mantle layer Weak Regionally restricted euxassay_010603_09 facial motor nucleus
Specimen euxassay_010603_10: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: liver lobe Moderate Regionally restricted euxassay_010603_10
TS23: mandible Weak Regionally restricted euxassay_010603_10
TS23: maxilla Weak Regionally restricted euxassay_010603_10
TS23: dorsal root ganglion Moderate Regionally restricted euxassay_010603_10
TS23: thymus primordium Moderate Regionally restricted euxassay_010603_10
TS23: ventral grey horn Weak Regionally restricted euxassay_010603_10
Specimen euxassay_010603_11: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: liver lobe Moderate Regionally restricted euxassay_010603_11
TS23: dorsal root ganglion Weak Regionally restricted euxassay_010603_11
TS23: thymus primordium Moderate Regionally restricted euxassay_010603_11
TS23: ventral grey horn Weak Regionally restricted euxassay_010603_11
Specimen euxassay_010603_12: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: liver lobe Moderate Regionally restricted euxassay_010603_12
TS23: mandible Weak Regionally restricted euxassay_010603_12
TS23: dorsal root ganglion Weak Regionally restricted euxassay_010603_12
TS23: thymus primordium Moderate Regionally restricted euxassay_010603_12
TS23: thyroid gland Weak Regionally restricted euxassay_010603_12
TS23: ventral grey horn Moderate Regionally restricted euxassay_010603_12
Specimen euxassay_010603_13: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: liver lobe Moderate Regionally restricted euxassay_010603_13
TS23: mandible Weak Regionally restricted euxassay_010603_13
TS23: dorsal root ganglion Moderate Regionally restricted euxassay_010603_13
TS23: submandibular gland primordium Weak Regionally restricted euxassay_010603_13
TS23: ventral grey horn Weak Regionally restricted euxassay_010603_13
Specimen euxassay_010603_14: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: liver lobe Moderate Regionally restricted euxassay_010603_14
TS23: mandible Weak Regionally restricted euxassay_010603_14
TS23: vagus ganglion Moderate Regionally restricted euxassay_010603_14
TS23: dorsal root ganglion Moderate Regionally restricted euxassay_010603_14
TS23: submandibular gland primordium Weak Regionally restricted euxassay_010603_14
TS23: ventral grey horn Moderate Regionally restricted euxassay_010603_14
TS23: medulla oblongata basal plate mantle layer Weak Regionally restricted euxassay_010603_14 facial motor nucleus
Specimen euxassay_010603_15: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: liver lobe Moderate Regionally restricted euxassay_010603_15
TS23: maxilla Weak Regionally restricted euxassay_010603_15
TS23: mandible Weak Regionally restricted euxassay_010603_15
TS23: trigeminal nerve Moderate Regionally restricted euxassay_010603_15
TS23: vagus ganglion Moderate Regionally restricted euxassay_010603_15
TS23: dorsal root ganglion Moderate Regionally restricted euxassay_010603_15
TS23: submandibular gland primordium Weak Regionally restricted euxassay_010603_15
TS23: ventral grey horn Moderate Regionally restricted euxassay_010603_15
TS23: medulla oblongata basal plate mantle layer Weak Regionally restricted euxassay_010603_15 facial motor nucleus
Specimen euxassay_010603_16: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: liver lobe Moderate Regionally restricted euxassay_010603_16
TS23: mandible Weak Regionally restricted euxassay_010603_16
TS23: maxilla Weak Regionally restricted euxassay_010603_16
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_010603_16
TS23: glossopharyngeal ganglion Moderate Regionally restricted euxassay_010603_16
TS23: dorsal root ganglion Moderate Regionally restricted euxassay_010603_16
Specimen euxassay_010603_17: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: liver lobe Moderate Regionally restricted euxassay_010603_17
TS23: mandible Weak Regionally restricted euxassay_010603_17
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_010603_17
TS23: dorsal root ganglion Moderate Regionally restricted euxassay_010603_17
Specimen euxassay_010603_18: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: liver lobe Moderate Regionally restricted euxassay_010603_18
TS23: mandible Weak Regionally restricted euxassay_010603_18
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_010603_18
TS23: dorsal root ganglion Moderate Regionally restricted euxassay_010603_18
Specimen euxassay_010603_19: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: liver lobe Moderate Regionally restricted euxassay_010603_19
TS23: mandible Moderate Regionally restricted euxassay_010603_19
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_010603_19
TS23: orbito-sphenoid Weak Regionally restricted euxassay_010603_19
Specimen euxassay_010603_20: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: liver lobe Moderate Regionally restricted euxassay_010603_20
TS23: mandible Moderate Regionally restricted euxassay_010603_20
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_010603_20
TS23: orbito-sphenoid Weak Regionally restricted euxassay_010603_20
Specimen euxassay_010603_21: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: liver lobe Moderate Regionally restricted euxassay_010603_21
TS23: mandible Moderate Regionally restricted euxassay_010603_21
TS23: neural retina Moderate Regionally restricted euxassay_010603_21
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_010603_21
TS23: orbito-sphenoid Weak Regionally restricted euxassay_010603_21
Specimen euxassay_010603_22: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: liver lobe Moderate Regionally restricted euxassay_010603_22
TS23: neural retina Moderate Regionally restricted euxassay_010603_22
TS23: orbito-sphenoid Weak Regionally restricted euxassay_010603_22
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
06/12/2024
MGI 6.13 		The Jackson Laboratory