About   Help   FAQ
Gene Expression Data
Assay Details
Assay
Reference: J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
Assay type: RNA in situ
MGI Accession ID: MGI:4823299
Gene symbol: Atoh1
Gene name: atonal bHLH transcription factor 1
Probe: MGC clone 58933
Probe preparation: Antisense labelled with digoxigenin RNA
Visualized with: Alkaline phosphatase
Assay notes: Cryosections of fresh frozen material were fixed in 4% paraformaldehyde for 20 min. before further processing. A tyramide-biotin/streptavidin amplification step was included in the in situ hybridization procedure.
Results
Specimen euxassay_001631_02: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: metencephalon rest of alar plate marginal layer Strong Regionally restricted euxassay_001631_02
Specimen euxassay_001631_03: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: metencephalon rest of alar plate marginal layer Strong Regionally restricted euxassay_001631_03
Specimen euxassay_001631_04: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: metencephalon rest of alar plate marginal layer Strong Regionally restricted euxassay_001631_04
Specimen euxassay_001631_05: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: metencephalon rest of alar plate marginal layer Strong Regionally restricted euxassay_001631_05
Specimen euxassay_001631_06: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: metencephalon rest of alar plate marginal layer Strong Regionally restricted euxassay_001631_06
Specimen euxassay_001631_07: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: metencephalon rest of alar plate marginal layer Strong Regionally restricted euxassay_001631_07
Specimen euxassay_001631_08: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: metencephalon rest of alar plate marginal layer Strong Regionally restricted euxassay_001631_08
Specimen euxassay_001631_09: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: metencephalon rest of alar plate marginal layer Strong Regionally restricted euxassay_001631_09
Specimen euxassay_001631_10: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: metencephalon rest of alar plate marginal layer Strong Regionally restricted euxassay_001631_10
Specimen euxassay_001631_12: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: metencephalon rest of alar plate marginal layer Strong Regionally restricted euxassay_001631_12
TS23: midgut Moderate Regionally restricted euxassay_001631_12
TS23: hindgut Moderate Regionally restricted euxassay_001631_12
Specimen euxassay_001631_13: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: metencephalon rest of alar plate marginal layer Strong Regionally restricted euxassay_001631_13
TS23: midgut Moderate Regionally restricted euxassay_001631_13
Specimen euxassay_001631_14: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: metencephalon rest of alar plate marginal layer Strong Regionally restricted euxassay_001631_14
TS23: midgut Moderate Regionally restricted euxassay_001631_14
TS23: foregut-midgut junction Moderate Regionally restricted euxassay_001631_14
Specimen euxassay_001631_15: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: metencephalon rest of alar plate marginal layer Strong Regionally restricted euxassay_001631_15
TS23: foregut-midgut junction Moderate Regionally restricted euxassay_001631_15
TS23: midgut Moderate Regionally restricted euxassay_001631_15
Specimen euxassay_001631_16: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: metencephalon rest of alar plate marginal layer Strong Regionally restricted euxassay_001631_16
Specimen euxassay_001631_17: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: metencephalon rest of alar plate marginal layer Strong Regionally restricted euxassay_001631_17
Specimen euxassay_001631_18: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: metencephalon rest of alar plate marginal layer Strong Regionally restricted euxassay_001631_18
Specimen euxassay_001631_19: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: metencephalon rest of alar plate marginal layer Strong Regionally restricted euxassay_001631_19
Specimen euxassay_001631_20: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: metencephalon rest of alar plate marginal layer Strong Regionally restricted euxassay_001631_20
Specimen euxassay_001631_21: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: metencephalon rest of alar plate marginal layer Strong Regionally restricted euxassay_001631_21
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
Warranty Disclaimer, Privacy Notice, Licensing, & Copyright
Send questions and comments to User Support. 		last database update
06/12/2024
MGI 6.13 		The Jackson Laboratory