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Gene Expression Data
Assay Details
Assay
Reference: J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
Assay type: RNA in situ
MGI Accession ID: MGI:4823252
Gene symbol: Bmal1
Gene name: basic helix-loop-helix ARNT like 1
Probe: IMAGE clone 537975
Probe preparation: Antisense labelled with digoxigenin RNA
Visualized with: Alkaline phosphatase
Assay notes: Cryosections of fresh frozen material were fixed in 4% paraformaldehyde for 20 min. before further processing. A tyramide-biotin/streptavidin amplification step was included in the in situ hybridization procedure.
Results
Specimen euxassay_000108_01: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: neural retina Strong Regionally restricted euxassay_000108_01
TS23: retina Strong Regionally restricted euxassay_000108_01
Specimen euxassay_000108_02: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: retina Strong Regionally restricted euxassay_000108_02
TS23: neural retina Strong Regionally restricted euxassay_000108_02
Specimen euxassay_000108_03: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: retina Strong Regionally restricted euxassay_000108_03
TS23: neural retina Strong Regionally restricted euxassay_000108_03
Specimen euxassay_000108_09: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: thalamus Strong Regionally restricted euxassay_000108_09 dorsal thalamus
Specimen euxassay_000108_10: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: thalamus Moderate Regionally restricted euxassay_000108_10 dorsal thalamus
Specimen euxassay_000108_11: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: spleen primordium Weak Uniform euxassay_000108_11
TS23: pituitary gland Weak Uniform euxassay_000108_11
Specimen euxassay_000108_12: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: pituitary gland Weak Uniform euxassay_000108_12
TS23: spleen primordium Weak Uniform euxassay_000108_12
Specimen euxassay_000108_13: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: thymus primordium Moderate Uniform euxassay_000108_13
Specimen euxassay_000108_14: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: thymus primordium Moderate Uniform euxassay_000108_14
TS23: pituitary gland Moderate Uniform euxassay_000108_14
Specimen euxassay_000108_16: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: thalamus Weak Regionally restricted euxassay_000108_16
TS23: hemolymphoid system Weak Regionally restricted euxassay_000108_16
TS23: thymus primordium Weak Regionally restricted euxassay_000108_16
TS23: pituitary gland Weak Regionally restricted euxassay_000108_16
Specimen euxassay_000108_17: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: pituitary gland Weak Regionally restricted euxassay_000108_17
TS23: thymus primordium Weak Regionally restricted euxassay_000108_17
TS23: thalamus Weak Regionally restricted euxassay_000108_17
Specimen euxassay_000108_18: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: thalamus Weak Regionally restricted euxassay_000108_18
TS23: thymus primordium Weak Regionally restricted euxassay_000108_18
Specimen euxassay_000108_19: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: thalamus Weak Regionally restricted euxassay_000108_19
Specimen euxassay_000108_23: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: retina Strong Regionally restricted euxassay_000108_23
TS23: neural retina Strong Regionally restricted euxassay_000108_23
Specimen euxassay_000108_24: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: retina Strong Regionally restricted euxassay_000108_24
TS23: neural retina Strong Regionally restricted euxassay_000108_24
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
04/30/2024
MGI 6.23 		The Jackson Laboratory