About   Help   FAQ
Gene Expression Data
Assay Details
Assay
Reference: J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
Assay type: RNA in situ
MGI Accession ID: MGI:4822944
Gene symbol: Acsl5
Gene name: acyl-CoA synthetase long-chain family member 5
Probe: T50063
Probe preparation: Antisense labelled with digoxigenin RNA
Visualized with: Alkaline phosphatase
Assay notes: Cryosections of fresh frozen material were fixed in 4% paraformaldehyde for 20 min. before further processing. A tyramide-biotin/streptavidin amplification step was included in the in situ hybridization procedure.
Results
Specimen euxassay_018902_01: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: liver Strong Regionally restricted euxassay_018902_01
TS23: stomach Moderate Regionally restricted euxassay_018902_01
TS23: pharyngo-tympanic tube Moderate Regionally restricted euxassay_018902_01
Specimen euxassay_018902_02: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: liver Strong Regionally restricted euxassay_018902_02
TS23: stomach Moderate Regionally restricted euxassay_018902_02
TS23: pharyngo-tympanic tube Weak Regionally restricted euxassay_018902_02
TS23: orbito-sphenoid Weak Regionally restricted euxassay_018902_02
Specimen euxassay_018902_03: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: liver Strong Regionally restricted euxassay_018902_03
TS23: stomach Moderate Regionally restricted euxassay_018902_03
TS23: pharyngo-tympanic tube Weak Regionally restricted euxassay_018902_03
TS23: orbito-sphenoid Weak Regionally restricted euxassay_018902_03
Specimen euxassay_018902_04: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: liver Strong Regionally restricted euxassay_018902_04
TS23: mandible Weak Regionally restricted euxassay_018902_04
TS23: stomach Moderate Regionally restricted euxassay_018902_04
TS23: pharyngo-tympanic tube Weak Regionally restricted euxassay_018902_04
TS23: orbito-sphenoid Weak Regionally restricted euxassay_018902_04
Specimen euxassay_018902_05: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: liver Strong Regionally restricted euxassay_018902_05
TS23: lung Moderate Regionally restricted euxassay_018902_05
TS23: mandible Weak Regionally restricted euxassay_018902_05
TS23: vibrissa Weak Regionally restricted euxassay_018902_05
TS23: pharyngo-tympanic tube Weak Regionally restricted euxassay_018902_05
TS23: orbito-sphenoid Weak Regionally restricted euxassay_018902_05
Specimen euxassay_018902_06: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: liver Strong Regionally restricted euxassay_018902_06
TS23: lung Strong Regionally restricted euxassay_018902_06
TS23: mandible Weak Regionally restricted euxassay_018902_06
TS23: maxilla Weak Regionally restricted euxassay_018902_06
TS23: stomach Moderate Regionally restricted euxassay_018902_06
TS23: midgut Strong Regionally restricted euxassay_018902_06
TS23: vibrissa Weak Regionally restricted euxassay_018902_06
TS23: axial musculature Weak Regionally restricted euxassay_018902_06
TS23: orbito-sphenoid Weak Regionally restricted euxassay_018902_06
Specimen euxassay_018902_07: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: liver Strong Regionally restricted euxassay_018902_07
TS23: lung Strong Regionally restricted euxassay_018902_07
TS23: mandible Weak Regionally restricted euxassay_018902_07
TS23: midgut Strong Regionally restricted euxassay_018902_07
TS23: stomach Moderate Regionally restricted euxassay_018902_07
TS23: metanephros Weak Regionally restricted euxassay_018902_07
TS23: vibrissa Weak Regionally restricted euxassay_018902_07
TS23: axial musculature Weak Regionally restricted euxassay_018902_07
Specimen euxassay_018902_08: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: liver Strong Regionally restricted euxassay_018902_08
TS23: lung Strong Regionally restricted euxassay_018902_08
TS23: submandibular gland primordium Strong Regionally restricted euxassay_018902_08
TS23: olfactory epithelium Moderate Regionally restricted euxassay_018902_08
TS23: mandible Weak Regionally restricted euxassay_018902_08
TS23: stomach Moderate Regionally restricted euxassay_018902_08
TS23: midgut Strong Regionally restricted euxassay_018902_08
TS23: metanephros Weak Regionally restricted euxassay_018902_08
TS23: pons mantle layer Weak Regionally restricted euxassay_018902_08 trigeminal motor nucleus
Specimen euxassay_018902_09: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: liver Strong Regionally restricted euxassay_018902_09
TS23: lung Strong Regionally restricted euxassay_018902_09
TS23: submandibular gland primordium Strong Regionally restricted euxassay_018902_09
TS23: olfactory epithelium Strong Regionally restricted euxassay_018902_09
TS23: maxilla Weak Regionally restricted euxassay_018902_09
TS23: mandible Weak Regionally restricted euxassay_018902_09
TS23: midgut Strong Regionally restricted euxassay_018902_09
TS23: stomach Moderate Regionally restricted euxassay_018902_09
TS23: metanephros Weak Regionally restricted euxassay_018902_09
TS23: adrenal gland Moderate Regionally restricted euxassay_018902_09
TS23: pancreas Moderate Regionally restricted euxassay_018902_09
Specimen euxassay_018902_10: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: liver Strong Regionally restricted euxassay_018902_10
TS23: lung Strong Regionally restricted euxassay_018902_10
TS23: submandibular gland primordium Strong Regionally restricted euxassay_018902_10
TS23: olfactory epithelium Strong Regionally restricted euxassay_018902_10
TS23: maxilla Weak Regionally restricted euxassay_018902_10
TS23: mandible Weak Regionally restricted euxassay_018902_10
TS23: stomach Moderate Regionally restricted euxassay_018902_10
TS23: midgut Strong Regionally restricted euxassay_018902_10
TS23: metanephros Weak Regionally restricted euxassay_018902_10
TS23: adrenal gland Moderate Regionally restricted euxassay_018902_10
TS23: pancreas Moderate Regionally restricted euxassay_018902_10
TS23: medulla oblongata basal plate mantle layer Weak Regionally restricted euxassay_018902_10 facial motor nucleus
Specimen euxassay_018902_11: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: liver Strong Regionally restricted euxassay_018902_11
TS23: lung Strong Regionally restricted euxassay_018902_11
TS23: submandibular gland primordium Strong Regionally restricted euxassay_018902_11
TS23: olfactory epithelium Moderate Regionally restricted euxassay_018902_11
TS23: midgut Strong Regionally restricted euxassay_018902_11
TS23: metanephros Weak Regionally restricted euxassay_018902_11
TS23: adrenal gland Moderate Regionally restricted euxassay_018902_11
TS23: pancreas Moderate Regionally restricted euxassay_018902_11
TS23: medulla oblongata basal plate mantle layer Weak Regionally restricted euxassay_018902_11 facial motor nucleus
TS23: cervical ganglion Weak Regionally restricted euxassay_018902_11
TS23: dorsal root ganglion Weak Regionally restricted euxassay_018902_11
Specimen euxassay_018902_12: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: liver Strong Regionally restricted euxassay_018902_12
TS23: thyroid gland Weak Regionally restricted euxassay_018902_12
TS23: lung Strong Regionally restricted euxassay_018902_12
TS23: olfactory epithelium Moderate Regionally restricted euxassay_018902_12
TS23: vomeronasal organ Moderate Regionally restricted euxassay_018902_12
TS23: midgut Strong Regionally restricted euxassay_018902_12
TS23: hindgut Strong Regionally restricted euxassay_018902_12
TS23: metanephros Weak Regionally restricted euxassay_018902_12
TS23: pancreas Moderate Regionally restricted euxassay_018902_12
TS23: cervico-thoracic ganglion Weak Regionally restricted euxassay_018902_12
TS23: dorsal root ganglion Weak Regionally restricted euxassay_018902_12
Specimen euxassay_018902_13: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: liver Strong Regionally restricted euxassay_018902_13
TS23: thymus primordium Strong Regionally restricted euxassay_018902_13
TS23: thyroid gland Moderate Regionally restricted euxassay_018902_13
TS23: bladder Strong Regionally restricted euxassay_018902_13
TS23: urethra Moderate Regionally restricted euxassay_018902_13 Originally this result was annotated to a male-specific term, but as the specimen was not sexed, it is likely the data annotator intended to use a non-sex specific term.
TS23: lung Strong Regionally restricted euxassay_018902_13
TS23: olfactory epithelium Moderate Regionally restricted euxassay_018902_13
TS23: vomeronasal organ Moderate Regionally restricted euxassay_018902_13
TS23: mandible Weak Regionally restricted euxassay_018902_13
TS23: midgut Strong Regionally restricted euxassay_018902_13
TS23: hindgut Strong Regionally restricted euxassay_018902_13
TS23: pancreas Moderate Regionally restricted euxassay_018902_13
TS23: ventral grey horn Moderate Regionally restricted euxassay_018902_13
TS23: dorsal root ganglion Weak Regionally restricted euxassay_018902_13
Specimen euxassay_018902_14: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: liver Strong Regionally restricted euxassay_018902_14
TS23: thymus primordium Strong Regionally restricted euxassay_018902_14
TS23: bladder Strong Regionally restricted euxassay_018902_14
TS23: urethra Moderate Regionally restricted euxassay_018902_14 Originally this result was annotated to a male-specific term, but as the specimen was not sexed, it is likely the data annotator intended to use a non-sex specific term.
TS23: lung Strong Regionally restricted euxassay_018902_14
TS23: midgut Strong Regionally restricted euxassay_018902_14
TS23: hindgut Strong Regionally restricted euxassay_018902_14
TS23: larynx Moderate Regionally restricted euxassay_018902_14
TS23: esophagus Moderate Regionally restricted euxassay_018902_14
TS23: ventral grey horn Weak Regionally restricted euxassay_018902_14
TS23: thoracic ganglion Weak Regionally restricted euxassay_018902_14
Specimen euxassay_018902_15: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: liver Strong Regionally restricted euxassay_018902_15
TS23: thymus primordium Strong Regionally restricted euxassay_018902_15
TS23: bladder Strong Regionally restricted euxassay_018902_15
TS23: lung Moderate Regionally restricted euxassay_018902_15
TS23: olfactory epithelium Moderate Regionally restricted euxassay_018902_15
TS23: midgut Strong Regionally restricted euxassay_018902_15
TS23: hindgut Strong Regionally restricted euxassay_018902_15
TS23: larynx Moderate Regionally restricted euxassay_018902_15
TS23: trachea Moderate Regionally restricted euxassay_018902_15
TS23: esophagus Moderate Regionally restricted euxassay_018902_15
TS23: ventral grey horn Weak Regionally restricted euxassay_018902_15
TS23: thoracic ganglion Weak Regionally restricted euxassay_018902_15
Specimen euxassay_018902_16: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: liver Strong Regionally restricted euxassay_018902_16
TS23: thymus primordium Strong Regionally restricted euxassay_018902_16
TS23: lung Strong Regionally restricted euxassay_018902_16
TS23: vomeronasal organ Weak Regionally restricted euxassay_018902_16
TS23: olfactory epithelium Weak Regionally restricted euxassay_018902_16
TS23: midgut Strong Regionally restricted euxassay_018902_16
TS23: pancreas Moderate Regionally restricted euxassay_018902_16
TS23: larynx Moderate Regionally restricted euxassay_018902_16
TS23: trachea Weak Regionally restricted euxassay_018902_16
TS23: esophagus Moderate Regionally restricted euxassay_018902_16
TS23: ventral grey horn Weak Regionally restricted euxassay_018902_16
TS23: dorsal root ganglion Weak Regionally restricted euxassay_018902_16
Specimen euxassay_018902_17: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: liver Strong Regionally restricted euxassay_018902_17
TS23: thymus primordium Strong Regionally restricted euxassay_018902_17
TS23: thyroid gland Moderate Regionally restricted euxassay_018902_17
TS23: lung Strong Regionally restricted euxassay_018902_17
TS23: olfactory epithelium Moderate Regionally restricted euxassay_018902_17
TS23: midgut Strong Regionally restricted euxassay_018902_17
TS23: pancreas Weak Regionally restricted euxassay_018902_17
TS23: ventral grey horn Weak Regionally restricted euxassay_018902_17
TS23: dorsal root ganglion Weak Regionally restricted euxassay_018902_17
Specimen euxassay_018902_18: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: liver Strong Regionally restricted euxassay_018902_18
TS23: thyroid gland Weak Regionally restricted euxassay_018902_18
TS23: lung Strong Regionally restricted euxassay_018902_18
TS23: submandibular gland primordium Moderate Regionally restricted euxassay_018902_18
TS23: olfactory epithelium Moderate Regionally restricted euxassay_018902_18
TS23: metanephros Weak Regionally restricted euxassay_018902_18
TS23: adrenal gland Weak Regionally restricted euxassay_018902_18
TS23: pancreas Weak Regionally restricted euxassay_018902_18
TS23: medulla oblongata basal plate mantle layer Weak Regionally restricted euxassay_018902_18 facial motor nucleus
TS23: ventral grey horn Weak Regionally restricted euxassay_018902_18
TS23: dorsal root ganglion Weak Regionally restricted euxassay_018902_18
Specimen euxassay_018902_19: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: liver Strong Regionally restricted euxassay_018902_19
TS23: lung Strong Regionally restricted euxassay_018902_19
TS23: submandibular gland primordium Strong Regionally restricted euxassay_018902_19
TS23: olfactory epithelium Moderate Regionally restricted euxassay_018902_19
TS23: maxilla Weak Regionally restricted euxassay_018902_19
TS23: mandible Weak Regionally restricted euxassay_018902_19
TS23: adrenal gland Weak Regionally restricted euxassay_018902_19
TS23: medulla oblongata basal plate mantle layer Weak Regionally restricted euxassay_018902_19 facial motor nucleus
TS23: pons mantle layer Weak Regionally restricted euxassay_018902_19 trigeminal motor nucleus
TS23: cervico-thoracic ganglion Weak Regionally restricted euxassay_018902_19
TS23: cervical ganglion Weak Regionally restricted euxassay_018902_19
TS23: dorsal root ganglion Weak Regionally restricted euxassay_018902_19
Specimen euxassay_018902_20: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: liver Strong Regionally restricted euxassay_018902_20
TS23: lung Strong Regionally restricted euxassay_018902_20
TS23: submandibular gland primordium Strong Regionally restricted euxassay_018902_20
TS23: olfactory epithelium Moderate Regionally restricted euxassay_018902_20
TS23: mandible Weak Regionally restricted euxassay_018902_20
TS23: maxilla Weak Regionally restricted euxassay_018902_20
TS23: adrenal gland Weak Regionally restricted euxassay_018902_20
TS23: dorsal root ganglion Weak Regionally restricted euxassay_018902_20
Specimen euxassay_018902_21: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: liver Strong Regionally restricted euxassay_018902_21
TS23: lung Strong Regionally restricted euxassay_018902_21
TS23: submandibular gland primordium Strong Regionally restricted euxassay_018902_21
TS23: maxilla Weak Regionally restricted euxassay_018902_21
TS23: mandible Weak Regionally restricted euxassay_018902_21
TS23: metanephros Weak Regionally restricted euxassay_018902_21
TS23: adrenal gland Weak Regionally restricted euxassay_018902_21
TS23: vibrissa Weak Regionally restricted euxassay_018902_21
TS23: dorsal root ganglion Weak Regionally restricted euxassay_018902_21
Specimen euxassay_018902_22: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: liver Strong Regionally restricted euxassay_018902_22
TS23: lung Strong Regionally restricted euxassay_018902_22
TS23: submandibular gland primordium Strong Regionally restricted euxassay_018902_22
TS23: mandible Weak Regionally restricted euxassay_018902_22
TS23: maxilla Weak Regionally restricted euxassay_018902_22
TS23: metanephros Weak Regionally restricted euxassay_018902_22
TS23: vibrissa Weak Regionally restricted euxassay_018902_22
TS23: orbito-sphenoid Weak Regionally restricted euxassay_018902_22
Specimen euxassay_018902_23: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: liver Strong Regionally restricted euxassay_018902_23
TS23: lung Strong Regionally restricted euxassay_018902_23
TS23: mandible Weak Regionally restricted euxassay_018902_23
TS23: metanephros Weak Regionally restricted euxassay_018902_23
TS23: vibrissa Weak Regionally restricted euxassay_018902_23
TS23: pharyngo-tympanic tube Weak Regionally restricted euxassay_018902_23
TS23: orbito-sphenoid Weak Regionally restricted euxassay_018902_23
Specimen euxassay_018902_24: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: liver Strong Regionally restricted euxassay_018902_24
TS23: lung Strong Regionally restricted euxassay_018902_24
TS23: mandible Weak Regionally restricted euxassay_018902_24
TS23: axial musculature Weak Regionally restricted euxassay_018902_24
TS23: orbito-sphenoid Weak Regionally restricted euxassay_018902_24
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
Warranty Disclaimer, Privacy Notice, Licensing, & Copyright
Send questions and comments to User Support. 		last database update
03/25/2025
MGI 6.24 		The Jackson Laboratory