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Gene Expression Data
Assay Details
Assay
Reference: J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
Assay type: RNA in situ
MGI Accession ID: MGI:4822738
Gene symbol: Gm6676
Gene name: predicted gene 6676
Probe: T37381
Probe preparation: Antisense labelled with digoxigenin RNA
Visualized with: Alkaline phosphatase
Assay notes: Cryosections of fresh frozen material were fixed in 4% paraformaldehyde for 20 min. before further processing. A tyramide-biotin/streptavidin amplification step was included in the in situ hybridization procedure. The probe used in this assay may also recognize other genes (see Assays MGI:4822737, MGI:4822739, MGI:4822740).
Results
Specimen euxassay_011202_01: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: pharyngo-tympanic tube Weak Regionally restricted euxassay_011202_01
TS23: forebrain Strong Uniform euxassay_011202_01
TS23: stomach Moderate Regionally restricted euxassay_011202_01
Specimen euxassay_011202_02: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: pharyngo-tympanic tube Weak Regionally restricted euxassay_011202_02
TS23: forebrain Strong Uniform euxassay_011202_02
TS23: neural retina Weak Regionally restricted euxassay_011202_02
TS23: stomach Moderate Regionally restricted euxassay_011202_02
Specimen euxassay_011202_03: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: pharyngo-tympanic tube Weak Regionally restricted euxassay_011202_03
TS23: forebrain Strong Uniform euxassay_011202_03
TS23: neural retina Moderate Regionally restricted euxassay_011202_03
TS23: stomach Moderate Regionally restricted euxassay_011202_03
Specimen euxassay_011202_04: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: pharyngo-tympanic tube Weak Regionally restricted euxassay_011202_04
TS23: forebrain Strong Uniform euxassay_011202_04
TS23: hindbrain Strong Uniform euxassay_011202_04
TS23: lung Weak Regionally restricted euxassay_011202_04
TS23: neural retina Moderate Regionally restricted euxassay_011202_04
TS23: stomach Moderate Regionally restricted euxassay_011202_04
TS23: trigeminal ganglion Moderate Single cells euxassay_011202_04
TS23: heart atrium Moderate Single cells euxassay_011202_04
Specimen euxassay_011202_05: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: forebrain Strong Uniform euxassay_011202_05
TS23: hindbrain Strong Uniform euxassay_011202_05
TS23: lung Strong Regionally restricted euxassay_011202_05
TS23: neural retina Moderate Regionally restricted euxassay_011202_05
TS23: stomach Moderate Regionally restricted euxassay_011202_05
TS23: trigeminal ganglion Moderate Single cells euxassay_011202_05
TS23: facial ganglion Moderate Single cells euxassay_011202_05
TS23: heart atrium Moderate Single cells euxassay_011202_05
Specimen euxassay_011202_06: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: forebrain Strong Uniform euxassay_011202_06
TS23: hindbrain Strong Uniform euxassay_011202_06
TS23: midbrain Strong Uniform euxassay_011202_06
TS23: lung Strong Regionally restricted euxassay_011202_06
TS23: stomach Moderate Regionally restricted euxassay_011202_06
TS23: trigeminal ganglion Moderate Single cells euxassay_011202_06
TS23: facial ganglion Moderate Single cells euxassay_011202_06
TS23: heart atrium Moderate Single cells euxassay_011202_06
Specimen euxassay_011202_07: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: submandibular gland primordium Weak Regionally restricted euxassay_011202_07
TS23: forebrain Strong Uniform euxassay_011202_07
TS23: hindbrain Strong Uniform euxassay_011202_07
TS23: midbrain Strong Uniform euxassay_011202_07
TS23: lung Strong Regionally restricted euxassay_011202_07
TS23: stomach Moderate Regionally restricted euxassay_011202_07
TS23: glossopharyngeal ganglion Weak Single cells euxassay_011202_07
TS23: vestibulo-cochlear ganglion Weak Single cells euxassay_011202_07
TS23: trigeminal ganglion Moderate Single cells euxassay_011202_07
TS23: dorsal root ganglion Moderate Single cells euxassay_011202_07
TS23: heart ventricle Moderate Single cells euxassay_011202_07
TS23: heart atrium Moderate Single cells euxassay_011202_07
Specimen euxassay_011202_08: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: submandibular gland primordium Weak Regionally restricted euxassay_011202_08
TS23: forebrain Strong Uniform euxassay_011202_08
TS23: hindbrain Strong Uniform euxassay_011202_08
TS23: midbrain Strong Uniform euxassay_011202_08
TS23: lung Strong Regionally restricted euxassay_011202_08
TS23: stomach Weak Regionally restricted euxassay_011202_08
TS23: midgut Weak Regionally restricted euxassay_011202_08
TS23: glossopharyngeal ganglion Moderate Single cells euxassay_011202_08
TS23: vestibulo-cochlear ganglion Moderate Single cells euxassay_011202_08
TS23: trigeminal ganglion Moderate Single cells euxassay_011202_08
TS23: facial ganglion Moderate Single cells euxassay_011202_08
TS23: dorsal root ganglion Weak Single cells euxassay_011202_08
TS23: heart atrium Moderate Single cells euxassay_011202_08
TS23: heart ventricle Moderate Single cells euxassay_011202_08
Specimen euxassay_011202_09: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: submandibular gland primordium Moderate Regionally restricted euxassay_011202_09
TS23: midbrain Strong Uniform euxassay_011202_09
TS23: hindbrain Strong Uniform euxassay_011202_09
TS23: forebrain Strong Uniform euxassay_011202_09
TS23: spinal cord Strong Uniform euxassay_011202_09
TS23: lung Strong Regionally restricted euxassay_011202_09
TS23: stomach Weak Regionally restricted euxassay_011202_09
TS23: midgut Weak Regionally restricted euxassay_011202_09
TS23: trigeminal ganglion Moderate Single cells euxassay_011202_09
TS23: vagus ganglion Moderate Single cells euxassay_011202_09
TS23: vestibulo-cochlear ganglion Moderate Single cells euxassay_011202_09
TS23: dorsal root ganglion Moderate Single cells euxassay_011202_09
TS23: upper jaw molar Weak Regionally restricted euxassay_011202_09
TS23: lower jaw molar Weak Regionally restricted euxassay_011202_09
TS23: heart ventricle Moderate Single cells euxassay_011202_09
TS23: heart atrium Moderate Single cells euxassay_011202_09
Specimen euxassay_011202_10: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: submandibular gland primordium Moderate Regionally restricted euxassay_011202_10
TS23: midbrain Strong Uniform euxassay_011202_10
TS23: hindbrain Strong Uniform euxassay_011202_10
TS23: forebrain Strong Uniform euxassay_011202_10
TS23: spinal cord Strong Uniform euxassay_011202_10
TS23: lung Strong Regionally restricted euxassay_011202_10
TS23: midgut Weak Regionally restricted euxassay_011202_10
TS23: vestibulo-cochlear ganglion Moderate Single cells euxassay_011202_10
TS23: trigeminal ganglion Moderate Single cells euxassay_011202_10
TS23: dorsal root ganglion Moderate Single cells euxassay_011202_10
TS23: heart ventricle Moderate Single cells euxassay_011202_10
TS23: heart atrium Moderate Single cells euxassay_011202_10
TS23: cervical ganglion Moderate Regionally restricted euxassay_011202_10
TS23: cervico-thoracic ganglion Moderate Regionally restricted euxassay_011202_10
Specimen euxassay_011202_11: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: submandibular gland primordium Moderate Regionally restricted euxassay_011202_11
TS23: spinal cord Strong Uniform euxassay_011202_11
TS23: midbrain Strong Uniform euxassay_011202_11
TS23: hindbrain Strong Uniform euxassay_011202_11
TS23: forebrain Strong Uniform euxassay_011202_11
TS23: lung Moderate Regionally restricted euxassay_011202_11
TS23: midgut Weak Regionally restricted euxassay_011202_11
TS23: trigeminal nerve Moderate Single cells euxassay_011202_11
TS23: dorsal root ganglion Moderate Single cells euxassay_011202_11
TS23: olfactory epithelium Moderate Regionally restricted euxassay_011202_11
TS23: heart atrium Moderate Single cells euxassay_011202_11
TS23: heart ventricle Moderate Single cells euxassay_011202_11
Specimen euxassay_011202_12: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: spinal cord Strong Uniform euxassay_011202_12
TS23: hindbrain Strong Uniform euxassay_011202_12
TS23: midbrain Strong Uniform euxassay_011202_12
TS23: forebrain Strong Uniform euxassay_011202_12
TS23: midgut Weak Regionally restricted euxassay_011202_12
TS23: hindgut Weak Regionally restricted euxassay_011202_12
TS23: olfactory epithelium Moderate Regionally restricted euxassay_011202_12
TS23: urethra Moderate Regionally restricted euxassay_011202_12 Originally this result was annotated to a male-specific term, but as the specimen was not sexed, it is likely the data annotator intended to use a non-gender specific term.
TS23: heart atrium Moderate Single cells euxassay_011202_12
TS23: heart ventricle Moderate Single cells euxassay_011202_12
TS23: thoracic ganglion Moderate Regionally restricted euxassay_011202_12
TS23: sacral vertebral cartilage condensation Strong Regionally restricted euxassay_011202_12
Specimen euxassay_011202_13: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: spinal cord Strong Uniform euxassay_011202_13
TS23: midbrain Strong Uniform euxassay_011202_13
TS23: hindbrain Strong Uniform euxassay_011202_13
TS23: forebrain Strong Uniform euxassay_011202_13
TS23: lung Moderate Regionally restricted euxassay_011202_13
TS23: midgut Weak Regionally restricted euxassay_011202_13
TS23: hindgut Weak Regionally restricted euxassay_011202_13
TS23: lower jaw incisor Weak Regionally restricted euxassay_011202_13
TS23: olfactory epithelium Moderate Regionally restricted euxassay_011202_13
TS23: esophagus Weak Regionally restricted euxassay_011202_13
TS23: urethra Moderate Regionally restricted euxassay_011202_13 Originally this result was annotated to a male-specific term, but as the specimen was not sexed, it is likely the data annotator intended to use a non-gender specific term.
TS23: heart ventricle Moderate Single cells euxassay_011202_13
TS23: heart atrium Moderate Single cells euxassay_011202_13
Specimen euxassay_011202_14: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: spinal cord Strong Uniform euxassay_011202_14
TS23: midbrain Strong Uniform euxassay_011202_14
TS23: hindbrain Strong Uniform euxassay_011202_14
TS23: forebrain Strong Uniform euxassay_011202_14
TS23: lung Moderate Regionally restricted euxassay_011202_14
TS23: midgut Weak Regionally restricted euxassay_011202_14
TS23: lower jaw incisor Weak Regionally restricted euxassay_011202_14
TS23: upper jaw incisor Weak Regionally restricted euxassay_011202_14
TS23: olfactory epithelium Moderate Regionally restricted euxassay_011202_14
TS23: urethra Moderate Regionally restricted euxassay_011202_14 Originally this result was annotated to a male-specific term, but as the specimen was not sexed, it is likely the data annotator intended to use a non-gender specific term.
TS23: heart ventricle Moderate Single cells euxassay_011202_14
TS23: heart atrium Moderate Single cells euxassay_011202_14
TS23: thoracic ganglion Moderate Regionally restricted euxassay_011202_14
Specimen euxassay_011202_15: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: spinal cord Strong Uniform euxassay_011202_15
TS23: midbrain Strong Uniform euxassay_011202_15
TS23: hindbrain Strong Uniform euxassay_011202_15
TS23: forebrain Strong Uniform euxassay_011202_15
TS23: lung Weak Regionally restricted euxassay_011202_15
TS23: midgut Weak Regionally restricted euxassay_011202_15
TS23: olfactory epithelium Moderate Regionally restricted euxassay_011202_15
TS23: heart ventricle Moderate Single cells euxassay_011202_15
TS23: heart atrium Moderate Single cells euxassay_011202_15
TS23: tongue Strong Single cells euxassay_011202_15
Specimen euxassay_011202_16: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: spinal cord Weak Uniform euxassay_011202_16
TS23: midbrain Strong Uniform euxassay_011202_16
TS23: hindbrain Strong Uniform euxassay_011202_16
TS23: forebrain Strong Uniform euxassay_011202_16
TS23: lung Moderate Regionally restricted euxassay_011202_16
TS23: midgut Weak Regionally restricted euxassay_011202_16
TS23: dorsal root ganglion Moderate Single cells euxassay_011202_16
TS23: heart ventricle Moderate Single cells euxassay_011202_16
TS23: heart atrium Moderate Single cells euxassay_011202_16
TS23: tongue Strong Single cells euxassay_011202_16
Specimen euxassay_011202_17: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: hindbrain Strong Uniform euxassay_011202_17
TS23: midbrain Strong Uniform euxassay_011202_17
TS23: forebrain Strong Uniform euxassay_011202_17
TS23: lung Strong Regionally restricted euxassay_011202_17
TS23: midgut Weak Regionally restricted euxassay_011202_17
TS23: dorsal root ganglion Moderate Single cells euxassay_011202_17
TS23: lower jaw incisor Moderate Regionally restricted euxassay_011202_17
TS23: heart atrium Moderate Single cells euxassay_011202_17
TS23: heart ventricle Moderate Single cells euxassay_011202_17
TS23: cervico-thoracic ganglion Moderate Regionally restricted euxassay_011202_17
TS23: cervical ganglion Moderate Regionally restricted euxassay_011202_17
Specimen euxassay_011202_18: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: submandibular gland primordium Moderate Regionally restricted euxassay_011202_18
TS23: hindbrain Strong Uniform euxassay_011202_18
TS23: midbrain Strong Uniform euxassay_011202_18
TS23: forebrain Strong Uniform euxassay_011202_18
TS23: lung Strong Regionally restricted euxassay_011202_18
TS23: vestibulo-cochlear ganglion Moderate Single cells euxassay_011202_18
TS23: vagus ganglion Moderate Single cells euxassay_011202_18
TS23: dorsal root ganglion Moderate Single cells euxassay_011202_18
TS23: upper jaw incisor Moderate Regionally restricted euxassay_011202_18
TS23: lower jaw incisor Moderate Regionally restricted euxassay_011202_18
TS23: olfactory epithelium Moderate Regionally restricted euxassay_011202_18
TS23: heart atrium Moderate Single cells euxassay_011202_18
TS23: heart ventricle Moderate Single cells euxassay_011202_18
Specimen euxassay_011202_19: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: submandibular gland primordium Moderate Regionally restricted euxassay_011202_19
TS23: midbrain Strong Uniform euxassay_011202_19
TS23: hindbrain Strong Uniform euxassay_011202_19
TS23: forebrain Strong Uniform euxassay_011202_19
TS23: lung Moderate Regionally restricted euxassay_011202_19
TS23: trigeminal nerve Moderate Single cells euxassay_011202_19
TS23: vestibulo-cochlear ganglion Moderate Single cells euxassay_011202_19
TS23: glossopharyngeal ganglion Moderate Single cells euxassay_011202_19
TS23: trigeminal ganglion Moderate Single cells euxassay_011202_19
TS23: olfactory epithelium Moderate Regionally restricted euxassay_011202_19
TS23: heart atrium Moderate Single cells euxassay_011202_19
Specimen euxassay_011202_20: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: submandibular gland primordium Moderate Regionally restricted euxassay_011202_20
TS23: midbrain Strong Uniform euxassay_011202_20
TS23: hindbrain Strong Uniform euxassay_011202_20
TS23: forebrain Strong Uniform euxassay_011202_20
TS23: lung Moderate Regionally restricted euxassay_011202_20
TS23: trigeminal ganglion Moderate Single cells euxassay_011202_20
TS23: glossopharyngeal ganglion Moderate Single cells euxassay_011202_20
TS23: vestibulo-cochlear ganglion Moderate Single cells euxassay_011202_20
TS23: heart atrium Moderate Single cells euxassay_011202_20
Specimen euxassay_011202_21: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: submandibular gland primordium Moderate Regionally restricted euxassay_011202_21
TS23: midbrain Strong Uniform euxassay_011202_21
TS23: hindbrain Strong Uniform euxassay_011202_21
TS23: forebrain Strong Uniform euxassay_011202_21
TS23: lung Strong Regionally restricted euxassay_011202_21
TS23: trigeminal ganglion Moderate Single cells euxassay_011202_21
TS23: facial ganglion Moderate Single cells euxassay_011202_21
TS23: vestibulo-cochlear ganglion Moderate Single cells euxassay_011202_21
TS23: upper jaw molar Moderate Regionally restricted euxassay_011202_21
TS23: lower jaw molar Moderate Regionally restricted euxassay_011202_21
TS23: olfactory epithelium Moderate Regionally restricted euxassay_011202_21
TS23: heart atrium Moderate Single cells euxassay_011202_21
Specimen euxassay_011202_22: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: hindbrain Strong Uniform euxassay_011202_22
TS23: forebrain Strong Uniform euxassay_011202_22
TS23: lung Strong Regionally restricted euxassay_011202_22
TS23: trigeminal ganglion Moderate Single cells euxassay_011202_22
TS23: facial ganglion Moderate Single cells euxassay_011202_22
TS23: olfactory epithelium Moderate Regionally restricted euxassay_011202_22
TS23: heart atrium Moderate Single cells euxassay_011202_22
Specimen euxassay_011202_23: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: forebrain Strong Uniform euxassay_011202_23
TS23: trigeminal ganglion Moderate Single cells euxassay_011202_23
TS23: heart atrium Moderate Single cells euxassay_011202_23
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
05/14/2024
MGI 6.23 		The Jackson Laboratory