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Gene Expression Data
Assay Details
Assay
Reference: J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
Assay type: RNA in situ
MGI Accession ID: MGI:4822696
Gene symbol: Arxes1
Gene name: adipocyte-related X-chromosome expressed sequence 1
Probe: EH1596 probe 1564
Probe preparation: Antisense labelled with digoxigenin RNA
Visualized with: Alkaline phosphatase
Assay notes: Cryosections of fresh frozen material were fixed in 4% paraformaldehyde for 20 min. before further processing. A tyramide-biotin/streptavidin amplification step was included in the in situ hybridization procedure.
Results
Specimen euxassay_001229_02: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_001229_02
TS23: cornea stroma Strong Regionally restricted euxassay_001229_02
Specimen euxassay_001229_03: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: axial musculature Strong Regionally restricted euxassay_001229_03 dorsal muscle
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_001229_03
TS23: telencephalon marginal layer Moderate Regionally restricted euxassay_001229_03
TS23: rest of cerebellum mantle layer Moderate Regionally restricted euxassay_001229_03
TS23: cornea stroma Strong Regionally restricted euxassay_001229_03
Specimen euxassay_001229_04: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: axial musculature Strong Regionally restricted euxassay_001229_04 dorsal muscle
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_001229_04
TS23: telencephalon marginal layer Moderate Regionally restricted euxassay_001229_04
TS23: midbrain mantle layer Moderate Regionally restricted euxassay_001229_04
TS23: rest of cerebellum mantle layer Moderate Regionally restricted euxassay_001229_04
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_001229_04
TS23: facial ganglion Moderate Regionally restricted euxassay_001229_04
TS23: cornea stroma Strong Regionally restricted euxassay_001229_04
Specimen euxassay_001229_05: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: axial musculature Strong Regionally restricted euxassay_001229_05 dorsal muscle
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_001229_05
TS23: telencephalon marginal layer Moderate Regionally restricted euxassay_001229_05
TS23: midbrain mantle layer Moderate Regionally restricted euxassay_001229_05
TS23: rest of cerebellum mantle layer Moderate Regionally restricted euxassay_001229_05
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_001229_05
TS23: facial ganglion Moderate Regionally restricted euxassay_001229_05
TS23: cornea stroma Strong Regionally restricted euxassay_001229_05
Specimen euxassay_001229_06: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: axial musculature Strong Regionally restricted euxassay_001229_06 dorsal muscle
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_001229_06
TS23: telencephalon marginal layer Moderate Regionally restricted euxassay_001229_06
TS23: midbrain mantle layer Moderate Regionally restricted euxassay_001229_06
TS23: rest of cerebellum mantle layer Moderate Regionally restricted euxassay_001229_06
TS23: pons mantle layer Moderate Regionally restricted euxassay_001229_06
TS23: medulla oblongata alar plate mantle layer Moderate Regionally restricted euxassay_001229_06
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_001229_06
TS23: facial ganglion Moderate Regionally restricted euxassay_001229_06
TS23: glossopharyngeal ganglion Moderate Regionally restricted euxassay_001229_06
TS23: vestibulo-cochlear ganglion Moderate Regionally restricted euxassay_001229_06
Specimen euxassay_001229_07: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: axial musculature Strong Regionally restricted euxassay_001229_07 dorsal muscle
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_001229_07
TS23: telencephalon marginal layer Moderate Regionally restricted euxassay_001229_07
TS23: diencephalon lateral wall mantle layer Moderate Regionally restricted euxassay_001229_07
TS23: midbrain mantle layer Moderate Regionally restricted euxassay_001229_07
TS23: rest of cerebellum mantle layer Moderate Regionally restricted euxassay_001229_07
TS23: pons mantle layer Moderate Regionally restricted euxassay_001229_07
TS23: medulla oblongata alar plate mantle layer Moderate Regionally restricted euxassay_001229_07
TS23: medulla oblongata basal plate mantle layer Moderate Regionally restricted euxassay_001229_07
TS23: spinal cord mantle layer Moderate Uniform euxassay_001229_07
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_001229_07
TS23: facial ganglion Moderate Regionally restricted euxassay_001229_07
TS23: glossopharyngeal ganglion Moderate Regionally restricted euxassay_001229_07
TS23: vestibulo-cochlear ganglion Moderate Regionally restricted euxassay_001229_07
Specimen euxassay_001229_08: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon marginal layer Moderate Regionally restricted euxassay_001229_08
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_001229_08
TS23: hypothalamus mantle layer Moderate Regionally restricted euxassay_001229_08
TS23: diencephalon lateral wall mantle layer Moderate Regionally restricted euxassay_001229_08
TS23: midbrain mantle layer Moderate Regionally restricted euxassay_001229_08
TS23: rest of cerebellum mantle layer Moderate Regionally restricted euxassay_001229_08
TS23: pons mantle layer Moderate Regionally restricted euxassay_001229_08
TS23: medulla oblongata alar plate mantle layer Moderate Regionally restricted euxassay_001229_08
TS23: medulla oblongata basal plate mantle layer Moderate Regionally restricted euxassay_001229_08
TS23: spinal cord mantle layer Moderate Uniform euxassay_001229_08
TS23: tail dorsal root ganglion Weak Regionally restricted euxassay_001229_08
TS23: vagus ganglion Moderate Regionally restricted euxassay_001229_08
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_001229_08
TS23: facial ganglion Moderate Regionally restricted euxassay_001229_08
TS23: vestibulo-cochlear ganglion Moderate Regionally restricted euxassay_001229_08
Specimen euxassay_001229_09: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_001229_09
TS23: telencephalon marginal layer Moderate Regionally restricted euxassay_001229_09
TS23: hypothalamus mantle layer Moderate Regionally restricted euxassay_001229_09
TS23: diencephalon lateral wall mantle layer Moderate Regionally restricted euxassay_001229_09
TS23: midbrain mantle layer Moderate Regionally restricted euxassay_001229_09
TS23: pons mantle layer Moderate Regionally restricted euxassay_001229_09
TS23: rest of cerebellum mantle layer Moderate Regionally restricted euxassay_001229_09
TS23: medulla oblongata alar plate mantle layer Moderate Regionally restricted euxassay_001229_09
TS23: medulla oblongata basal plate mantle layer Moderate Regionally restricted euxassay_001229_09
TS23: spinal cord mantle layer Moderate Uniform euxassay_001229_09
TS23: tail dorsal root ganglion Moderate Regionally restricted euxassay_001229_09
TS23: cervical ganglion Moderate Regionally restricted euxassay_001229_09
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_001229_09
TS23: vagus ganglion Moderate Regionally restricted euxassay_001229_09
TS23: vestibulo-cochlear ganglion Moderate Regionally restricted euxassay_001229_09
Specimen euxassay_001229_10: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_001229_10
TS23: telencephalon marginal layer Moderate Regionally restricted euxassay_001229_10
TS23: hypothalamus mantle layer Moderate Regionally restricted euxassay_001229_10
TS23: diencephalon lateral wall mantle layer Moderate Regionally restricted euxassay_001229_10
TS23: midbrain mantle layer Moderate Regionally restricted euxassay_001229_10
TS23: pons mantle layer Moderate Regionally restricted euxassay_001229_10
TS23: medulla oblongata alar plate mantle layer Moderate Regionally restricted euxassay_001229_10
TS23: medulla oblongata basal plate mantle layer Moderate Regionally restricted euxassay_001229_10
TS23: spinal cord mantle layer Moderate Uniform euxassay_001229_10
TS23: tail dorsal root ganglion Moderate Regionally restricted euxassay_001229_10
TS23: cervico-thoracic ganglion Moderate Regionally restricted euxassay_001229_10
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_001229_10
Specimen euxassay_001229_11: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_001229_11
TS23: telencephalon marginal layer Moderate Regionally restricted euxassay_001229_11
TS23: hypothalamus mantle layer Moderate Regionally restricted euxassay_001229_11
TS23: diencephalon lateral wall mantle layer Moderate Regionally restricted euxassay_001229_11
TS23: midbrain mantle layer Moderate Regionally restricted euxassay_001229_11
TS23: pons mantle layer Moderate Regionally restricted euxassay_001229_11
TS23: medulla oblongata alar plate mantle layer Moderate Regionally restricted euxassay_001229_11
TS23: medulla oblongata basal plate mantle layer Moderate Regionally restricted euxassay_001229_11
TS23: spinal cord mantle layer Moderate Uniform euxassay_001229_11
TS23: tail dorsal root ganglion Moderate Regionally restricted euxassay_001229_11
TS23: thoracic ganglion Moderate Regionally restricted euxassay_001229_11
Specimen euxassay_001229_12: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_001229_12
TS23: telencephalon marginal layer Moderate Regionally restricted euxassay_001229_12
TS23: hypothalamus mantle layer Moderate Regionally restricted euxassay_001229_12
TS23: diencephalon lateral wall mantle layer Moderate Regionally restricted euxassay_001229_12
TS23: midbrain mantle layer Moderate Regionally restricted euxassay_001229_12
TS23: pons mantle layer Moderate Regionally restricted euxassay_001229_12
TS23: medulla oblongata alar plate mantle layer Moderate Regionally restricted euxassay_001229_12
TS23: medulla oblongata basal plate mantle layer Moderate Regionally restricted euxassay_001229_12
TS23: spinal cord mantle layer Moderate Uniform euxassay_001229_12
TS23: tail dorsal root ganglion Moderate Regionally restricted euxassay_001229_12
TS23: thoracic ganglion Moderate Regionally restricted euxassay_001229_12
Specimen euxassay_001229_13: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: olfactory cortex marginal layer Moderate Regionally restricted euxassay_001229_13
TS23: telencephalon marginal layer Moderate Regionally restricted euxassay_001229_13
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_001229_13
TS23: hypothalamus mantle layer Moderate Regionally restricted euxassay_001229_13
TS23: diencephalon lateral wall mantle layer Moderate Regionally restricted euxassay_001229_13
TS23: midbrain mantle layer Moderate Regionally restricted euxassay_001229_13
TS23: pons mantle layer Moderate Regionally restricted euxassay_001229_13
TS23: medulla oblongata alar plate mantle layer Moderate Regionally restricted euxassay_001229_13
TS23: medulla oblongata basal plate mantle layer Moderate Regionally restricted euxassay_001229_13
TS23: spinal cord mantle layer Moderate Uniform euxassay_001229_13
TS23: tail dorsal root ganglion Moderate Regionally restricted euxassay_001229_13
TS23: thoracic ganglion Moderate Regionally restricted euxassay_001229_13
Specimen euxassay_001229_14: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: olfactory cortex marginal layer Moderate Regionally restricted euxassay_001229_14
TS23: telencephalon marginal layer Moderate Regionally restricted euxassay_001229_14
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_001229_14
TS23: hypothalamus mantle layer Moderate Regionally restricted euxassay_001229_14
TS23: diencephalon lateral wall mantle layer Moderate Regionally restricted euxassay_001229_14
TS23: midbrain mantle layer Moderate Regionally restricted euxassay_001229_14
TS23: pons mantle layer Moderate Regionally restricted euxassay_001229_14
TS23: rest of cerebellum mantle layer Moderate Regionally restricted euxassay_001229_14
TS23: medulla oblongata alar plate mantle layer Moderate Regionally restricted euxassay_001229_14
TS23: medulla oblongata basal plate mantle layer Moderate Regionally restricted euxassay_001229_14
TS23: spinal cord mantle layer Moderate Uniform euxassay_001229_14
TS23: thoracic ganglion Moderate Regionally restricted euxassay_001229_14
Specimen euxassay_001229_15: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: olfactory cortex marginal layer Moderate Regionally restricted euxassay_001229_15
TS23: telencephalon marginal layer Moderate Regionally restricted euxassay_001229_15
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_001229_15
TS23: diencephalon lateral wall mantle layer Moderate Regionally restricted euxassay_001229_15
TS23: hypothalamus mantle layer Moderate Regionally restricted euxassay_001229_15
TS23: midbrain mantle layer Moderate Regionally restricted euxassay_001229_15
TS23: rest of cerebellum mantle layer Moderate Regionally restricted euxassay_001229_15
TS23: pons mantle layer Moderate Regionally restricted euxassay_001229_15
TS23: medulla oblongata alar plate mantle layer Moderate Regionally restricted euxassay_001229_15
TS23: medulla oblongata basal plate mantle layer Moderate Regionally restricted euxassay_001229_15
TS23: spinal cord mantle layer Moderate Uniform euxassay_001229_15
TS23: thoracic ganglion Moderate Regionally restricted euxassay_001229_15
Specimen euxassay_001229_16: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: olfactory cortex marginal layer Moderate Regionally restricted euxassay_001229_16
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_001229_16
TS23: telencephalon marginal layer Moderate Regionally restricted euxassay_001229_16
TS23: hypothalamus mantle layer Moderate Regionally restricted euxassay_001229_16
TS23: diencephalon lateral wall mantle layer Moderate Regionally restricted euxassay_001229_16
TS23: midbrain mantle layer Moderate Regionally restricted euxassay_001229_16
TS23: rest of cerebellum mantle layer Moderate Regionally restricted euxassay_001229_16
TS23: pons mantle layer Moderate Regionally restricted euxassay_001229_16
TS23: medulla oblongata alar plate mantle layer Moderate Regionally restricted euxassay_001229_16
TS23: medulla oblongata basal plate mantle layer Moderate Regionally restricted euxassay_001229_16
TS23: spinal cord mantle layer Moderate Uniform euxassay_001229_16
TS23: tail dorsal root ganglion Moderate Regionally restricted euxassay_001229_16
Specimen euxassay_001229_17: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_001229_17
TS23: telencephalon marginal layer Moderate Regionally restricted euxassay_001229_17
TS23: hypothalamus mantle layer Moderate Regionally restricted euxassay_001229_17
TS23: diencephalon lateral wall mantle layer Moderate Regionally restricted euxassay_001229_17
TS23: midbrain mantle layer Moderate Regionally restricted euxassay_001229_17
TS23: rest of cerebellum mantle layer Moderate Regionally restricted euxassay_001229_17
TS23: pons mantle layer Moderate Regionally restricted euxassay_001229_17
TS23: medulla oblongata alar plate mantle layer Moderate Regionally restricted euxassay_001229_17
TS23: medulla oblongata basal plate mantle layer Moderate Regionally restricted euxassay_001229_17
TS23: spinal cord mantle layer Moderate Uniform euxassay_001229_17
TS23: tail dorsal root ganglion Moderate Regionally restricted euxassay_001229_17
TS23: cervical ganglion Moderate Regionally restricted euxassay_001229_17
TS23: cervico-thoracic ganglion Moderate Regionally restricted euxassay_001229_17
Specimen euxassay_001229_18: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: olfactory cortex marginal layer Moderate Regionally restricted euxassay_001229_18
TS23: telencephalon marginal layer Moderate Regionally restricted euxassay_001229_18
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_001229_18
TS23: diencephalon lateral wall mantle layer Moderate Regionally restricted euxassay_001229_18
TS23: hypothalamus mantle layer Moderate Regionally restricted euxassay_001229_18
TS23: midbrain mantle layer Moderate Regionally restricted euxassay_001229_18
TS23: pons mantle layer Moderate Regionally restricted euxassay_001229_18
TS23: rest of cerebellum mantle layer Moderate Regionally restricted euxassay_001229_18
TS23: medulla oblongata alar plate mantle layer Moderate Regionally restricted euxassay_001229_18
TS23: medulla oblongata basal plate mantle layer Moderate Regionally restricted euxassay_001229_18
TS23: vestibulo-cochlear ganglion Moderate Regionally restricted euxassay_001229_18
TS23: glossopharyngeal ganglion Moderate Regionally restricted euxassay_001229_18
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_001229_18
TS23: vagus ganglion Moderate Regionally restricted euxassay_001229_18
Specimen euxassay_001229_19: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: axial musculature Strong Regionally restricted euxassay_001229_19 dorsal muscle
TS23: olfactory cortex marginal layer Moderate Regionally restricted euxassay_001229_19
TS23: telencephalon marginal layer Moderate Regionally restricted euxassay_001229_19
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_001229_19
TS23: hypothalamus mantle layer Moderate Regionally restricted euxassay_001229_19
TS23: diencephalon lateral wall mantle layer Moderate Regionally restricted euxassay_001229_19
TS23: midbrain mantle layer Moderate Regionally restricted euxassay_001229_19
TS23: rest of cerebellum mantle layer Moderate Regionally restricted euxassay_001229_19
TS23: pons mantle layer Moderate Regionally restricted euxassay_001229_19
TS23: glossopharyngeal ganglion Moderate Regionally restricted euxassay_001229_19
TS23: vestibulo-cochlear ganglion Moderate Regionally restricted euxassay_001229_19
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_001229_19
Specimen euxassay_001229_20: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: axial musculature Strong Regionally restricted euxassay_001229_20 dorsal muscle
TS23: olfactory cortex marginal layer Moderate Regionally restricted euxassay_001229_20
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_001229_20
TS23: telencephalon marginal layer Moderate Regionally restricted euxassay_001229_20
TS23: diencephalon lateral wall mantle layer Moderate Regionally restricted euxassay_001229_20
TS23: rest of cerebellum mantle layer Moderate Regionally restricted euxassay_001229_20
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_001229_20
TS23: vestibulo-cochlear ganglion Moderate Regionally restricted euxassay_001229_20
Specimen euxassay_001229_21: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: axial musculature Strong Regionally restricted euxassay_001229_21 dorsal muscle
TS23: telencephalon marginal layer Moderate Regionally restricted euxassay_001229_21
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_001229_21
TS23: olfactory cortex marginal layer Moderate Regionally restricted euxassay_001229_21
TS23: rest of cerebellum mantle layer Moderate Regionally restricted euxassay_001229_21
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_001229_21
TS23: facial ganglion Moderate Regionally restricted euxassay_001229_21
Specimen euxassay_001229_22: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: axial musculature Strong Regionally restricted euxassay_001229_22 dorsal muscle
TS23: telencephalon marginal layer Moderate Regionally restricted euxassay_001229_22
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_001229_22
TS23: rest of cerebellum mantle layer Moderate Regionally restricted euxassay_001229_22
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_001229_22
TS23: facial ganglion Moderate Regionally restricted euxassay_001229_22
Specimen euxassay_001229_23: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: axial musculature Strong Regionally restricted euxassay_001229_23 dorsal muscle
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_001229_23
TS23: telencephalon marginal layer Moderate Regionally restricted euxassay_001229_23
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_001229_23
TS23: facial ganglion Moderate Regionally restricted euxassay_001229_23
Specimen euxassay_001229_24: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_001229_24
TS23: telencephalon marginal layer Moderate Regionally restricted euxassay_001229_24
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
05/21/2024
MGI 6.23 		The Jackson Laboratory