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Gene Expression Data
Assay Details
Assay
Reference: J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
Assay type: RNA in situ
MGI Accession ID: MGI:4822594
Gene symbol: Dnaaf2
Gene name: dynein, axonemal assembly factor 2
Probe: IMAGE clone 907534
Probe preparation: Antisense labelled with digoxigenin RNA
Visualized with: Alkaline phosphatase
Assay notes: Cryosections of fresh frozen material were fixed in 4% paraformaldehyde for 20 min. before further processing. A tyramide-biotin/streptavidin amplification step was included in the in situ hybridization procedure.
Results
Specimen euxassay_000104_01: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: cerebral cortex ventricular layer Moderate Uniform euxassay_000104_01
TS23: otic capsule Moderate Regionally restricted euxassay_000104_01
TS23: frontal bone primordium Weak Uniform euxassay_000104_01
TS23: liver Weak Spotted euxassay_000104_01
Specimen euxassay_000104_02: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: otic capsule Moderate Regionally restricted euxassay_000104_02
TS23: cerebral cortex ventricular layer Moderate Uniform euxassay_000104_02
TS23: frontal bone primordium Weak Uniform euxassay_000104_02
TS23: liver Weak Spotted euxassay_000104_02
Specimen euxassay_000104_03: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: cerebral cortex ventricular layer Moderate Uniform euxassay_000104_03
TS23: inner ear labyrinth Moderate Regionally restricted euxassay_000104_03
TS23: otic capsule Moderate Regionally restricted euxassay_000104_03
TS23: frontal bone primordium Weak Uniform euxassay_000104_03
TS23: liver Weak Spotted euxassay_000104_03
Specimen euxassay_000104_04: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: cerebral cortex ventricular layer Moderate Uniform euxassay_000104_04
TS23: frontal bone primordium Weak Uniform euxassay_000104_04
Specimen euxassay_000104_05: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: frontal bone primordium Weak Uniform euxassay_000104_05
TS23: otic capsule Weak Uniform euxassay_000104_05
TS23: cerebral cortex ventricular layer Moderate Uniform euxassay_000104_05
TS23: liver Weak Spotted euxassay_000104_05
Specimen euxassay_000104_06: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: cerebral cortex ventricular layer Moderate Uniform euxassay_000104_06
TS23: frontal bone primordium Weak Regionally restricted euxassay_000104_06
TS23: liver Weak Spotted euxassay_000104_06
Specimen euxassay_000104_07: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: cerebral cortex ventricular layer Moderate Uniform euxassay_000104_07
TS23: otic capsule Absent euxassay_000104_07
TS23: liver Weak Spotted euxassay_000104_07
TS23: submandibular gland primordium Moderate Regionally restricted euxassay_000104_07
TS23: midbrain ventricular layer Moderate Uniform euxassay_000104_07
TS23: inferior colliculus Present euxassay_000104_07
TS23: metanephros Weak Regionally restricted euxassay_000104_07
Specimen euxassay_000104_08: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: cerebral cortex ventricular layer Moderate Uniform euxassay_000104_08
TS23: midbrain ventricular layer Moderate Uniform euxassay_000104_08
TS23: midbrain lateral wall Moderate Uniform euxassay_000104_08
TS23: inferior colliculus Present euxassay_000104_08
TS23: vibrissa Weak Spotted euxassay_000104_08
TS23: otic capsule Weak Regionally restricted euxassay_000104_08
TS23: submandibular gland primordium Moderate Regionally restricted euxassay_000104_08
TS23: liver Weak Spotted euxassay_000104_08
TS23: metanephros Weak Regionally restricted euxassay_000104_08
TS23: mesenchyme of metanephros Weak Regionally restricted euxassay_000104_08
Specimen euxassay_000104_09: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: liver Weak Spotted euxassay_000104_09
TS23: metanephros Weak Regionally restricted euxassay_000104_09
TS23: mesenchyme of metanephros Weak Regionally restricted euxassay_000104_09
TS23: submandibular gland primordium Moderate Regionally restricted euxassay_000104_09
TS23: otic capsule Weak Regionally restricted euxassay_000104_09
TS23: turbinate bone primordium Weak Regionally restricted euxassay_000104_09
TS23: cerebral cortex ventricular layer Moderate Uniform euxassay_000104_09
TS23: midbrain lateral wall Moderate Uniform euxassay_000104_09
TS23: midbrain ventricular layer Moderate Uniform euxassay_000104_09
TS23: midbrain mantle layer Moderate Uniform euxassay_000104_09
Specimen euxassay_000104_10: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: cerebral cortex ventricular layer Moderate Uniform euxassay_000104_10
TS23: midbrain ventricular layer Moderate Uniform euxassay_000104_10
TS23: vibrissa Weak Spotted euxassay_000104_10
TS23: turbinate bone primordium Moderate Regionally restricted euxassay_000104_10
TS23: submandibular gland primordium Weak Regionally restricted euxassay_000104_10
TS23: liver Weak Spotted euxassay_000104_10
TS23: metanephros Weak Regionally restricted euxassay_000104_10
TS23: thymus primordium Weak Regionally restricted euxassay_000104_10
Specimen euxassay_000104_11: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: metanephros Weak Spotted euxassay_000104_11
TS23: liver Weak Spotted euxassay_000104_11
TS23: lower jaw Weak Regionally restricted euxassay_000104_11
TS23: turbinate bone primordium Moderate Regionally restricted euxassay_000104_11
TS23: cerebral cortex ventricular layer Moderate Regionally restricted euxassay_000104_11
TS23: midbrain ventricular layer Moderate Uniform euxassay_000104_11
TS23: midbrain mantle layer Moderate Uniform euxassay_000104_11
Specimen euxassay_000104_12: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: midbrain ventricular layer Moderate Uniform euxassay_000104_12
TS23: midbrain mantle layer Moderate Uniform euxassay_000104_12
TS23: lower jaw Weak Regionally restricted euxassay_000104_12
TS23: oral epithelium Weak Regionally restricted euxassay_000104_12
TS23: liver Moderate Uniform euxassay_000104_12
TS23: cerebral cortex ventricular layer Moderate Uniform euxassay_000104_12
Specimen euxassay_000104_13: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: cerebral cortex ventricular layer Moderate Uniform euxassay_000104_13
TS23: midbrain ventricular layer Moderate Uniform euxassay_000104_13
TS23: midbrain mantle layer Moderate Uniform euxassay_000104_13
TS23: nasal cavity Weak Regionally restricted euxassay_000104_13
TS23: liver Weak Spotted euxassay_000104_13
Specimen euxassay_000104_14: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: nasal cavity Weak Regionally restricted euxassay_000104_14
TS23: nasal septum Weak Regionally restricted euxassay_000104_14
TS23: liver Weak Spotted euxassay_000104_14
TS23: midbrain lateral wall Weak Regionally restricted euxassay_000104_14
Specimen euxassay_000104_15: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: nasal cavity Weak Spotted euxassay_000104_15
TS23: liver Weak Spotted euxassay_000104_15
TS23: cerebral cortex ventricular layer Moderate Uniform euxassay_000104_15
Specimen euxassay_000104_16: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: cerebral cortex ventricular layer Moderate Uniform euxassay_000104_16
TS23: nasal cavity Weak Regionally restricted euxassay_000104_16
TS23: nasal septum Weak Regionally restricted euxassay_000104_16
TS23: liver Weak Spotted euxassay_000104_16
Specimen euxassay_000104_17: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: liver Weak Spotted euxassay_000104_17
TS23: nasal septum Weak Regionally restricted euxassay_000104_17
TS23: nasal cavity Weak Regionally restricted euxassay_000104_17
TS23: cerebral cortex ventricular layer Moderate Uniform euxassay_000104_17
Specimen euxassay_000104_18: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: cerebral cortex ventricular layer Moderate Uniform euxassay_000104_18
TS23: nasal cavity Moderate Regionally restricted euxassay_000104_18
TS23: nasal septum Moderate Regionally restricted euxassay_000104_18
TS23: liver Weak Spotted euxassay_000104_18
TS23: submandibular gland primordium Weak Regionally restricted euxassay_000104_18
TS23: metanephros Weak Regionally restricted euxassay_000104_18
Specimen euxassay_000104_19: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: metanephros Weak Regionally restricted euxassay_000104_19
TS23: liver Weak Spotted euxassay_000104_19
TS23: submandibular gland primordium Moderate Regionally restricted euxassay_000104_19
TS23: nasal cavity Weak Regionally restricted euxassay_000104_19
TS23: cerebral cortex ventricular layer Moderate Uniform euxassay_000104_19
Specimen euxassay_000104_20: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: cerebral cortex ventricular layer Moderate Uniform euxassay_000104_20
TS23: turbinate bone primordium Moderate Regionally restricted euxassay_000104_20
TS23: liver Weak Spotted euxassay_000104_20
TS23: metanephros Weak Regionally restricted euxassay_000104_20
TS23: lower jaw Weak Regionally restricted euxassay_000104_20
TS23: inner ear Weak Regionally restricted euxassay_000104_20
TS23: inner ear labyrinth Weak Regionally restricted euxassay_000104_20
Specimen euxassay_000104_21: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: cerebral cortex ventricular layer Moderate Uniform euxassay_000104_21
Specimen euxassay_000104_22: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: cerebral cortex ventricular layer Moderate Uniform euxassay_000104_22
TS23: inner ear labyrinth Weak Regionally restricted euxassay_000104_22
TS23: otic capsule Weak Regionally restricted euxassay_000104_22
TS23: turbinate bone primordium Weak Regionally restricted euxassay_000104_22
TS23: liver Weak Spotted euxassay_000104_22
TS23: lower jaw Weak Regionally restricted euxassay_000104_22
Specimen euxassay_000104_23: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: liver Weak Spotted euxassay_000104_23
TS23: lower jaw Weak Regionally restricted euxassay_000104_23
TS23: frontal bone primordium Moderate Regionally restricted euxassay_000104_23
TS23: cerebral cortex ventricular layer Moderate Uniform euxassay_000104_23
Specimen euxassay_000104_24: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: liver Weak Spotted euxassay_000104_24
TS23: frontal bone primordium Moderate Regionally restricted euxassay_000104_24
TS23: vibrissa Moderate Regionally restricted euxassay_000104_24
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
03/25/2025
MGI 6.24 		The Jackson Laboratory