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Gene Expression Data
Assay Details
Assay
Reference: J:112341 Durmus T, et al., Expression analysis of the novel gene collagen triple helix repeat containing-1 (Cthrc1). Gene Expr Patterns. 2006 Dec;6(8):935-40
Assay type: RNA in situ
MGI Accession ID: MGI:3686532
Gene symbol: Cthrc1
Gene name: collagen triple helix repeat containing 1
Probe: Cthrc1 cDNA1
Probe preparation: Antisense labelled with digoxigenin RNA
Results
Specimen 1A: embryonic day 8.5 (more )
Structure Level Pattern Image Note
TS13: notochord Present Graded 1A Expression is in a caudal to rostral gradient.
Specimen 1B: embryonic day 8.5 (more )
Structure Level Pattern Image Note
TS13: future brain Present Regionally restricted 1B Expression is in in the floor plate of the anterior ventral neural tube.
Specimen 1C: embryonic day 9.5 (more )
Structure Level Pattern Image Note
TS15: branchial arch Present 1C
TS15: otocyst Present 1C
TS15: trunk somite Present 1C
TS15: future hindbrain Present Regionally restricted 1C Expression is at the midbrain/hindbrain junction.
TS15: future midbrain Present Regionally restricted 1C Expression is at the midbrain/hindbrain junction.
Specimen 1D: embryonic day 10.5 (more )
Structure Level Pattern Image Note
TS17: otocyst Present 1D
TS17: tail somite Strong 1D
TS17: trunk somite Strong 1D
Specimen 1E: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS22: cranium Strong 1E
TS22: rib cartilage condensation Strong 1E
TS22: vertebral cartilage condensation Strong 1E
TS22: tongue Present Regionally restricted 1E Expression is in the tongue along the interface of epithelium and underlying skeletal muscle.
Specimen 1G: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS22: rib cartilage condensation Strong Regionally restricted 1G Expression is in chondrocytes developing from condensing mesenchyme and is absent in hypertrophic chondrocytes.
TS22: diaphragm Weak 1G
TS22: respiratory tract Weak 1G
Specimen 1H: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS22: basisphenoid cartilage condensation Strong 1H
TS22: remnant of Rathke's pouch Present 1H
Specimen 1I: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS22: vault of skull Present Regionally restricted 1I Expression is at the intramembranous bone formation of the skull.
TS22: midbrain Present Regionally restricted 1I Expression is in the ventral parts of the midbrain.
TS22: head mesenchyme Present 1I
Specimen 1J: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS22: collecting duct Present Regionally restricted 1J Expression is in the collecting ducts trunks.
TS22: early nephron Weak Regionally restricted 1J Expression is in the distal tubules.
Specimen Not shown: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS22: ureter Present Regionally restricted Expresion is in the ureter epithelium.
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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05/14/2024
MGI 6.23 		The Jackson Laboratory