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Gene Expression Data
Assay Details
Assay
Reference: J:98790 Ybot-Gonzalez P, et al., Expression pattern of glypican-4 suggests multiple roles during mouse development. Dev Dyn. 2005 Apr 13;233(3):1013-1017
Assay type: RNA in situ
MGI Accession ID: MGI:3582047
Gene symbol: Gpc4
Gene name: glypican 4
Probe: Glypican-4 cDNA1
Probe preparation: Antisense labelled with digoxigenin RNA
Visualized with: Alkaline phosphatase
Results
Specimen 1A: embryonic day 7.5 (more )
Structure Level Pattern Image Note
TS11: embryo Present Regionally restricted 1A Expression was detected in the anterior region.

Specimen 1B: embryonic day 7.5 (more )
Note: Embryo was embedded in a gelatin-sucrose-albumin (1:1.5:60) solution, solidified by addition of 2.5% glutaraldehyde and sectioned with a vibratome.
Structure Level Pattern Image Note
TS11: mesendoderm Present Regionally restricted 1B Expression was detected in anterior mesendoderm.
TS11: neural ectoderm Absent 1B

Specimen 1C: embryonic day 8.0 (more )
Note: Embryo was embedded in a gelatin-sucrose-albumin (1:1.5:60) solution, solidified by addition of 2.5% glutaraldehyde and sectioned with a vibratome.
Structure Level Pattern Image Note
TS12: neural ectoderm Present 1C
TS12: future prosencephalon Present Regionally restricted 1C Expression was most intense in the midline neuroepithelium of the forebrain.
TS12: embryo endoderm Absent 1C

Specimen 1D: embryonic day 8.0 (more )
Structure Level Pattern Image Note
TS12: neural ectoderm Present 1D
TS12: future prosencephalon Present Regionally restricted 1D Expression was most intense in the midline neuroepithelium of the forebrain.
TS12: embryo endoderm Absent 1D

Specimen 1E: embryonic day 8.0 (more )
Structure Level Pattern Image Note
TS12: neural ectoderm Present 1E
TS12: embryo endoderm Absent 1E

Specimen 1F: embryonic day 7.5-8.0 (more )
Structure Level Pattern Image Note
TS12: future prosencephalon Present Regionally restricted 1F Expression expands laterally from midline.

Specimen 1G: embryonic day 7.5-8.0 (more )
Structure Level Pattern Image Note
TS12: future prosencephalon Present Regionally restricted 1G Expression expands laterally from midline.

Specimen 1H: embryonic day 7.5-8.0 (more )
Note: Embryo was embedded in a gelatin-sucrose-albumin (1:1.5:60) solution, solidified by addition of 2.5% glutaraldehyde and sectioned with a vibratome.
Structure Level Pattern Image Note
TS12: future prosencephalon Present Regionally restricted 1H Expression expands laterally from midline.

Specimen 1I: embryonic day 8.0-8.5 (more )
Structure Level Pattern Image Note
TS12: future spinal cord neural plate Present Regionally restricted 1I Expression was detected throughout the anterior neural ridge.
TS12: future prosencephalon Present Regionally restricted 1I Expression was principally localized to the neuroepithelium of the anterior forebrain.
TS12: neural tube Absent 1I Expression was not detected in the neuroepithelium in the spinal region corresponding to the site of initiation of neural tube closure.

Specimen 1J: embryonic day 8.0-8.5 (more )
Structure Level Pattern Image Note
TS12: future spinal cord neural plate Present Regionally restricted 1J Expression was detected throughout the anterior neural ridge.

Specimen 1K: embryonic day 8.0-8.5 (more )
Note: Embryo was embedded in a gelatin-sucrose-albumin (1:1.5:60) solution, solidified by addition of 2.5% glutaraldehyde and sectioned with a vibratome.
Structure Level Pattern Image Note
TS12: future hindbrain neural crest Weak 1K Expression was detected at a more posterior level in the bending neural folds and in cells migrating lateral to the neural folds, which appear to be hindbrain neural crest.
TS12: future hindbrain neural fold Weak 1K Expression was detected at a more posterior level in the bending neural folds and in cells migrating lateral to the neural folds, which appear to be hindbrain neural crest.
TS12: migrating neural crest Weak 1K Expression was detected at a more posterior level in the bending neural folds and in cells migrating lateral to the neural folds, which appear to be hindbrain neural crest.

Specimen 1L: embryonic day 8.0-8.5 (more )
Note: Embryo was embedded in a gelatin-sucrose-albumin (1:1.5:60) solution, solidified by addition of 2.5% glutaraldehyde and sectioned with a vibratome.
Structure Level Pattern Image Note
TS12: future spinal cord neural plate Present Regionally restricted 1L Expression was detected throughout the anterior neural ridge.
TS12: future prosencephalon Present Regionally restricted 1L Expression was principally localized to the neuroepithelium of the anterior forebrain.

Specimen 2A: embryonic day 8.5 (more )
Structure Level Pattern Image Note
TS13: future prosencephalon Present Regionally restricted 2A Expression was detected in the neuroepithelium of ventral telencephalon, the rostral forebrain and the infundibular region of the ventral forebrain.
TS13: future spinal cord neural plate Present Regionally restricted 2A Expression was detected in the anterior neural ridge.
TS13: neural tube Absent 2A Expression was not detected in the neuroepithelium in the spinal region corresponding to the site of initiation of neural tube closure.
TS13: neural ectoderm Present Regionally restricted 2A Expression was detected in the neuroepithelium in the caudal region.
TS13: surface ectoderm Present Regionally restricted 2A Expression was detected in the caudal region.
TS13: future hindbrain Absent 2A
TS13: future midbrain Absent 2A

Specimen 2B: embryonic day 8.5 (more )
Structure Level Pattern Image Note
TS13: future spinal cord neural plate Present Regionally restricted 2B Expression was detected in the anterior neural ridge.
TS13: neural tube Absent 2B Expression was not detected in the neuroepithelium in the spinal region corresponding to the site of initiation of neural tube closure.
TS13: future prosencephalon Present Regionally restricted 2B Expression was detected in the rostral forebrain and the infundibular region of the ventral forebrain.
TS13: future hindbrain Absent 2B
TS13: future midbrain Absent 2B

Specimen 2E: embryonic day 9.0 (more )
Structure Level Pattern Image Note
TS14: prosencephalon Present Regionally restricted 2E Expression was detected in the neuroepithelium of ventral telencephalon.
TS14: central nervous system Present Regionally restricted 2E Expression was detected in the neuroepithelium in the caudal region.
TS14: surface ectoderm Present Regionally restricted 2E Expression was detected in the caudal region.

Specimen 2F: embryonic day 9.5 (more )
Structure Level Pattern Image Note
TS15: telencephalon Strong Uniform 2F Expression was detected throughout the neuroepithelium of the entire telencephalon.
TS15: central nervous system Present Regionally restricted 2F Expression was detected in the neuroepithelium in the caudal region.
TS15: surface ectoderm Present Regionally restricted 2F Expression was detected in the caudal region.
TS15: 1st branchial arch Present Regionally restricted 2F Expression was detected in the proximal region with lower intensity more distally.
TS15: 2nd branchial arch Present Regionally restricted 2F Expression was detected in the proximal region with lower intensity more distally.
TS15: forelimb bud ectoderm Present Regionally restricted 2F Expression was detected in a line in the surface ectoderm on the flank where the forelimb bud is forming.

Specimen 2G: embryonic day 9.0 (more )
Note: Embryo was embedded in a gelatin-sucrose-albumin (1:1.5:60) solution, solidified by addition of 2.5% glutaraldehyde and sectioned with a vibratome.
Structure Level Pattern Image Note
TS14: future spinal cord neural fold Present Regionally restricted 2G Expression was detected in the tips of neural folds.
TS14: surface ectoderm Present 2G

Specimen 2H: embryonic day 9.0 (more )
Note: Embryo was embedded in a gelatin-sucrose-albumin (1:1.5:60) solution, solidified by addition of 2.5% glutaraldehyde and sectioned with a vibratome.
Structure Level Pattern Image Note
TS14: prosencephalon Present Regionally restricted 2H Expression was detected in the neuroepithelium of ventral telencephalon.

Specimen 2I: embryonic day 9.0 (more )
Note: Embryo was embedded in a gelatin-sucrose-albumin (1:1.5:60) solution, solidified by addition of 2.5% glutaraldehyde and sectioned with a vibratome.
Structure Level Pattern Image Note
TS14: prosencephalon Present Regionally restricted 2I Expression was detected in the neuroepithelium of ventral telencephalon.

Specimen 2J: embryonic day 9.0 (more )
Note: Embryo was embedded in a gelatin-sucrose-albumin (1:1.5:60) solution, solidified by addition of 2.5% glutaraldehyde and sectioned with a vibratome.
Structure Level Pattern Image Note
TS14: central nervous system Present Regionally restricted 2J Expression was detected in the neuroepithelium in the caudal region but was absent from the most ventral neuroepithelium.
TS14: surface ectoderm Present Regionally restricted 2J Expression was detected in the caudal region.

Specimen 3A: embryonic day 10.0 (more )
Structure Level Pattern Image Note
TS16: telencephalon Strong Uniform 3A Expression was detected throughout the neuroepithelium of the entire telencephalon.
TS16: central nervous system Present Regionally restricted 3A Expression was detected in the neuroepithelium in the caudal region.
TS16: surface ectoderm Present Regionally restricted 3A Expression was detected in the caudal region.
TS16: 3rd branchial arch Present 3A
TS16: limb ectoderm Present Regionally restricted 3A Expression was detected in the ectoderm on the ventral surface of the limb bud at the junction of the bud and the flank.
TS16: trunk somite Present Regionally restricted 3A Expression was detected in a discrete stripe in the middle.

Specimen 3B: embryonic day 10.0 (more )
Note: Embryo was embedded in a gelatin-sucrose-albumin (1:1.5:60) solution, solidified by addition of 2.5% glutaraldehyde and sectioned with a vibratome.
Structure Level Pattern Image Note
TS16: rhombomere Present Regionally restricted 3B Expression was detected in the ventral domains of rhombomeres.

Specimen 3C: embryonic day 10.0 (more )
Note: Embryo was embedded in a gelatin-sucrose-albumin (1:1.5:60) solution, solidified by addition of 2.5% glutaraldehyde and sectioned with a vibratome.
Structure Level Pattern Image Note
TS16: telencephalon Strong Uniform 3C Expression was detected throughout the neuroepithelium of the entire telencephalon.
TS16: Rathke's pouch Present 3C
TS16: infundibular recess of 3rd ventricle Present Regionally restricted 3C Expression was detected in the infundibulum.
TS16: optic stalk Present 3C
TS16: branchial arch ectoderm Present Regionally restricted 3C Expression was detected on the external and internal surfaces of the branchial arch surface ectoderm.
TS16: oral epithelium Present 3C Expression was detected in the oral ectoderm.

Specimen not shown: embryonic day 9.5 (more )
Structure Level Pattern Image Note
TS15: otocyst Present Expression in the otic vesicles was first detected at E9.5.

Specimen 3D: embryonic day 10.0 (more )
Note: Embryo was embedded in a gelatin-sucrose-albumin (1:1.5:60) solution, solidified by addition of 2.5% glutaraldehyde and sectioned with a vibratome.
Structure Level Pattern Image Note
TS16: otocyst Present Regionally restricted 3D Expression was localized to the lateral half of each vesicle.

Specimen 3E: embryonic day 10.0 (more )
Note: Embryo was embedded in a gelatin-sucrose-albumin (1:1.5:60) solution, solidified by addition of 2.5% glutaraldehyde and sectioned with a vibratome.
Structure Level Pattern Image Note
TS16: limb ectoderm Present Regionally restricted 3E Expression was detected in the ectoderm on the ventral surface of the limb bud at the junction of the bud and the flank.
TS16: trunk somite Present Regionally restricted 3E Expression was detected in the epaxial myotome - subjacent to the dermomyotome.

Specimen 3F: embryonic day 10.0 (more )
Note: Embryo was embedded in a gelatin-sucrose-albumin (1:1.5:60) solution, solidified by addition of 2.5% glutaraldehyde and sectioned with a vibratome.
Structure Level Pattern Image Note
TS16: branchial arch ectoderm Present Regionally restricted 3F Expression was detected on the external and internal surfaces of the branchial arch surface ectoderm.
TS16: oral epithelium Present 3F Expression was detected in the oral ectoderm.

Specimen 3G: embryonic day 10.0 (more )
Note: Embryo was embedded in a gelatin-sucrose-albumin (1:1.5:60) solution, solidified by addition of 2.5% glutaraldehyde and sectioned with a vibratome.
Structure Level Pattern Image Note
TS16: optic cup inner layer Present 3G Expression was detected in the presumptive neuroretina.
TS16: optic cup outer layer Absent 3G Expression was absent in the presumptive retinal pigment epithelium.

Specimen 3H: embryonic day 10.0 (more )
Note: Embryo was embedded in a gelatin-sucrose-albumin (1:1.5:60) solution, solidified by addition of 2.5% glutaraldehyde and sectioned with a vibratome.
Structure Level Pattern Image Note
TS16: Rathke's pouch Present 3H
TS16: infundibular recess of 3rd ventricle Present Regionally restricted 3H Expression was detected in the infundibulum.

Specimen 3I: embryonic day 10.0 (more )
Note: Embryo was embedded in a gelatin-sucrose-albumin (1:1.5:60) solution, solidified by addition of 2.5% glutaraldehyde and sectioned with a vibratome.
Structure Level Pattern Image Note
TS16: central nervous system Present Regionally restricted 3I Expression was detected in the neuroepithelium in the caudal region but was absent from the most ventral neuroepithelium.
TS16: surface ectoderm Present Regionally restricted 3I Expression was detected in the caudal region but was absent in the midline.

Specimen 3J: embryonic day 10.5 (more )
Structure Level Pattern Image Note
TS17: telencephalon Strong Uniform 3J Expression was detected throughout the neuroepithelium of the entire telencephalon.
TS17: central nervous system Present Regionally restricted 3J Expression was detected in the neuroepithelium in the caudal region.
TS17: surface ectoderm Present Regionally restricted 3J Expression was detected in the caudal region.
TS17: 3rd branchial arch Present 3J
TS17: limb ectoderm Present Regionally restricted 3J Expression was detected in the ectoderm on the ventral surface of the limb bud at the junction of the bud and the flank and the surface ectoderm on the dorsal aspect of the limb adjacent to the flank.
TS17: trunk somite Present Regionally restricted 3J Expression was detected in a discrete stripe in the middle.
TS17: apical ectodermal ridge Absent 3J

Specimen 3K: embryonic day 10.5 (more )
Note: Embryo was embedded in a gelatin-sucrose-albumin (1:1.5:60) solution, solidified by addition of 2.5% glutaraldehyde and sectioned with a vibratome.
Structure Level Pattern Image Note
TS17: embryo Present 3K

Specimen 3L: embryonic day 10.5 (more )
Note: Embryo was embedded in a gelatin-sucrose-albumin (1:1.5:60) solution, solidified by addition of 2.5% glutaraldehyde and sectioned with a vibratome.
Structure Level Pattern Image Note
TS17: telencephalon Strong Uniform 3L Expression was detected throughout the neuroepithelium of the entire telencephalon.

Specimen 3M: embryonic day 10.5 (more )
Note: Embryo was embedded in a gelatin-sucrose-albumin (1:1.5:60) solution, solidified by addition of 2.5% glutaraldehyde and sectioned with a vibratome.
Structure Level Pattern Image Note
TS17: limb ectoderm Present Regionally restricted 3M Expression was detected in the ectoderm on the ventral surface of the limb bud at the junction of the bud and the flank and the surface ectoderm on the dorsal aspect of the limb adjacent to the flank.

Specimen 3N: embryonic day 10.5 (more )
Note: Embryo was embedded in a gelatin-sucrose-albumin (1:1.5:60) solution, solidified by addition of 2.5% glutaraldehyde and sectioned with a vibratome.
Structure Level Pattern Image Note
TS17: trunk somite Present Regionally restricted 3N Expression was detected in the epaxial myotome - subjacent to the dermomyotome.

Specimen 3O: embryonic day 10.5 (more )
Note: Embryo was embedded in a gelatin-sucrose-albumin (1:1.5:60) solution, solidified by addition of 2.5% glutaraldehyde and sectioned with a vibratome.
Structure Level Pattern Image Note
TS17: trunk somite Present Regionally restricted 3O Expression was detected in a discrete stripe in the middle.

Specimen 3P: embryonic day 10.5 (more )
Note: Embryo was embedded in a gelatin-sucrose-albumin (1:1.5:60) solution, solidified by addition of 2.5% glutaraldehyde and sectioned with a vibratome.
Structure Level Pattern Image Note
TS17: embryo Present 3P

Specimen 3Q: embryonic day 10.5 (more )
Note: Embryo was embedded in a gelatin-sucrose-albumin (1:1.5:60) solution, solidified by addition of 2.5% glutaraldehyde and sectioned with a vibratome.
Structure Level Pattern Image Note
TS17: branchial arch ectoderm Present Regionally restricted 3Q Expression was detected on the external and internal surfaces of the branchial arch surface ectoderm.
TS17: oral epithelium Present 3Q Expression was detected in the oral ectoderm.
TS17: 1st branchial arch mandibular component Weak Regionally restricted 3Q Expression was weak or absent where the mandibular component of the first arch is beginning to fuse.

Specimen 3R: embryonic day 10.5 (more )
Note: Embryo was embedded in a gelatin-sucrose-albumin (1:1.5:60) solution, solidified by addition of 2.5% glutaraldehyde and sectioned with a vibratome.
Structure Level Pattern Image Note
TS17: optic stalk Present 3R
TS17: lens pit Present 3R Expression was detected in the lens placode.

Specimen 3S: embryonic day 10.5 (more )
Note: Embryo was embedded in a gelatin-sucrose-albumin (1:1.5:60) solution, solidified by addition of 2.5% glutaraldehyde and sectioned with a vibratome.
Structure Level Pattern Image Note
TS17: eye Present 3S

Specimen 3T: embryonic day 10.5 (more )
Note: Embryo was embedded in a gelatin-sucrose-albumin (1:1.5:60) solution, solidified by addition of 2.5% glutaraldehyde and sectioned with a vibratome.
Structure Level Pattern Image Note
TS17: central nervous system Present Regionally restricted 3T Expression was detected in the neuroepithelium in the caudal region but was absent from the most ventral neuroepithelium.
TS17: surface ectoderm Present Regionally restricted 3T Expression was detected in the caudal region including the midline.


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last database update
05/07/2024
MGI 6.23
The Jackson Laboratory