Gene Expression Data
Assay Details
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Assay
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Reference:
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J:76815
Broccoli V, et al., Dmbx1 is a paired-box containing gene specifically expressed in the caudal most brain structures. Mech Dev. 2002 Jun;114(1-2):219
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Assay type:
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RNA in situ
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MGI Accession ID:
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MGI:3039779
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Gene symbol:
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Dmbx1
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Gene name:
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diencephalon/mesencephalon homeobox 1
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Results
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Specimen
2A:
embryonic day 8.5
(more  )
Specimen
2A:
(close  )
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Genetic Background:
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Not Specified
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Age:
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embryonic day 8.5
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Age Note:
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Age of embryo at noon of plug day not specified in reference.
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Sex:
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Not Specified
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Type:
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whole mount
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Fixation:
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4% Paraformaldehyde
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Specimen
2C:
embryonic day 8.5
(more )
Specimen
2C:
(close )
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Genetic Background:
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Not Specified
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Age:
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embryonic day 8.5
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Age Note:
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Age of embryo at noon of plug day not specified in reference.
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Sex:
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Not Specified
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Type:
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whole mount
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Fixation:
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4% Paraformaldehyde
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| Structure |
Level |
Pattern |
Image |
Note |
| TS13: future brain |
Present |
Regionally restricted |
2C
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Expression is in the anterior neural plate with the anterior border extending over part of the diencephalic anlage.
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| TS13: future midbrain |
Present |
Regionally restricted |
2C
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Expression is in the anterior neural plate with the anterior border extending over part of the diencephalic anlage.
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| TS13: future prosencephalon |
Present |
Regionally restricted |
2C
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Expression is in the anterior neural plate with the anterior border extending over part of the diencephalic anlage.
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Specimen
2E:
embryonic day 9.5
(more )
Specimen
2E:
(close )
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Genetic Background:
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Not Specified
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Age:
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embryonic day 9.5
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Age Note:
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Age of embryo at noon of plug day not specified in reference.
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Sex:
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Not Specified
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Type:
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whole mount
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Fixation:
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4% Paraformaldehyde
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Specimen
2I:
embryonic day 10.5
(more )
Specimen
2I:
(close )
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Genetic Background:
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Not Specified
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Age:
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embryonic day 10.5
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Age Note:
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Age of embryo at noon of plug day not specified in reference.
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Sex:
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Not Specified
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Type:
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whole mount
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Fixation:
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4% Paraformaldehyde
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| Structure |
Level |
Pattern |
Image |
Note |
| TS17: hindbrain |
Strong |
Regionally restricted |
2I
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Expression is in a bilateral stream of cells in the rhombic lip.
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Specimen
2J, K:
embryonic day 10.5
(more )
Specimen
2J, K:
(close )
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Genetic Background:
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Not Specified
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Age:
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embryonic day 10.5
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Age Note:
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Age of embryo at noon of plug day not specified in reference.
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Sex:
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Not Specified
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Type:
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section from whole mount
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Fixation:
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4% Paraformaldehyde
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Specimen
2L:
embryonic day 12.5
(more )
Specimen
2L:
(close )
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Genetic Background:
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Not Specified
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Age:
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embryonic day 12.5
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Age Note:
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Age of embryo at noon of plug day not specified in reference.
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Sex:
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Not Specified
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Type:
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whole mount
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Fixation:
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4% Paraformaldehyde
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Specimen
2M:
embryonic day 12.5
(more )
Specimen
2M:
(close )
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Genetic Background:
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Not Specified
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Age:
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embryonic day 12.5
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Age Note:
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Age of embryo at noon of plug day not specified in reference.
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Sex:
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Not Specified
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Type:
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whole mount
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Fixation:
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4% Paraformaldehyde
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| Structure |
Level |
Pattern |
Image |
Note |
| TS20: spinal cord |
Present |
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2M
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| TS20: forebrain |
Present |
Regionally restricted |
2M
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Expression is maintained in the alar plate and is absent in the basal plate and extends from the caudal mesencephalon to prosomere 1.
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| TS20: midbrain |
Present |
Regionally restricted |
2M
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Expression is maintained in the alar plate and is absent in the basal plate and extends from the caudal mesencephalon to prosomere 1.
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Specimen
2N:
embryonic day 12.5
(more )
Specimen
2N:
(close )
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Genetic Background:
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Not Specified
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Age:
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embryonic day 12.5
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Age Note:
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Age of embryo at noon of plug day not specified in reference.
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Sex:
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Not Specified
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Type:
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whole mount
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Fixation:
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4% Paraformaldehyde
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Specimen
2O:
embryonic day 14.5
(more )
Specimen
2O:
(close )
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Genetic Background:
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Not Specified
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Age:
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embryonic day 14.5
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Age Note:
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Age of embryo at noon of plug day not specified in reference.
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Sex:
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Not Specified
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Type:
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whole mount
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Fixation:
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4% Paraformaldehyde
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| Structure |
Level |
Pattern |
Image |
Note |
| TS22: cerebellum |
Present |
Regionally restricted |
2O
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Expressing cells disperse rostrally over the surface of the cerebellar anlage.
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| TS22: forebrain |
Present |
Regionally restricted |
2O
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Expression is maintained in the alar plate and is absent in the basal plate and extends from the caudal mesencephalon to prosomere 1.
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| TS22: midbrain |
Present |
Regionally restricted |
2O
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Expression is maintained in the alar plate and is absent in the basal plate and extends from the caudal mesencephalon to prosomere 1.
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| TS22: midbrain tegmentum |
Absent |
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2O
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| TS22: pons |
Absent |
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2O
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Specimen
2P:
embryonic day 14.5
(more )
Specimen
2P:
(close )
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Genetic Background:
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Not Specified
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Age:
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embryonic day 14.5
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Age Note:
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Age of embryo at noon of plug day not specified in reference.
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Sex:
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Not Specified
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Type:
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whole mount
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Fixation:
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4% Paraformaldehyde
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Specimen
Not Shown:
embryonic day 16.5
(more )
Specimen
Not Shown:
(close )
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Genetic Background:
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Not Specified
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Age:
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embryonic day 16.5
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Age Note:
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Age of embryo at noon of plug day not specified in reference.
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Sex:
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Not Specified
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Type:
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whole mount
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Fixation:
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4% Paraformaldehyde
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Specimen
3A:
embryonic day 11.5
(more )
Note: Also stained for Pax7 (assay MGI:3039938).
Specimen
3A:
(close )
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Genetic Background:
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Not Specified
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Age:
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embryonic day 11.5
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Age Note:
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Age of embryo at noon of plug day not specified in reference.
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Sex:
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Not Specified
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Type:
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whole mount
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Fixation:
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4% Paraformaldehyde
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Note:
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Also stained for Pax7 (assay MGI:3039938).
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| Structure |
Level |
Pattern |
Image |
Note |
| TS19: neural tube lateral wall |
Present |
Regionally restricted |
3A
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Expression is in a domain below the sulcus limitans and does not overlap with that of Pax7.
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Specimen
3C:
embryonic day 11.5
(more )
Note: Also stained for En1 (assay MGI:3039791).
Specimen
3C:
(close )
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Genetic Background:
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Not Specified
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Age:
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embryonic day 11.5
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Age Note:
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Age of embryo at noon of plug day not specified in reference.
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Sex:
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Not Specified
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Type:
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whole mount
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Fixation:
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4% Paraformaldehyde
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Note:
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Also stained for En1 (assay MGI:3039791).
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| Structure |
Level |
Pattern |
Image |
Note |
| TS19: neural tube lateral wall |
Present |
Regionally restricted |
3C
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Expression is in a domain below the sulcus limitans of V0 interneurons abutting En1 expressing cells.
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Specimen
3D:
embryonic day 11.5
(more )
Note: Also stained for Pax6 (assay MGI:3039932).
Specimen
3D:
(close )
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Genetic Background:
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Not Specified
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Age:
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embryonic day 11.5
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Age Note:
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Age of embryo at noon of plug day not specified in reference.
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Sex:
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Not Specified
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Type:
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whole mount
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Fixation:
|
4% Paraformaldehyde
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|
Note:
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Also stained for Pax6 (assay MGI:3039932).
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| Structure |
Level |
Pattern |
Image |
Note |
| TS19: neural tube lateral wall |
Present |
Regionally restricted |
3D
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Expression is in a domain below the sulcus limitans and does not overlap with that of Pax6.
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Specimen
3E:
embryonic day 12.5
(more )
Note: Also stained for Pax7 (assay MGI:3039938).
Specimen
3E:
(close )
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Genetic Background:
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Not Specified
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Age:
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embryonic day 12.5
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Age Note:
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Age of embryo at noon of plug day not specified in reference.
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Sex:
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Not Specified
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Type:
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whole mount
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Fixation:
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4% Paraformaldehyde
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Note:
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Also stained for Pax7 (assay MGI:3039938).
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| Structure |
Level |
Pattern |
Image |
Note |
| TS20: spinal cord lateral wall |
Present |
Regionally restricted |
3E
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Expression is in a domain below the sulcus limitans and does not overlap with that of Pax7.
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Specimen
3G:
embryonic day 12.5
(more )
Note: Also stained for En1 (assay MGI:3039791).
Specimen
3G:
(close )
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Genetic Background:
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Not Specified
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Age:
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embryonic day 12.5
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Age Note:
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Age of embryo at noon of plug day not specified in reference.
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Sex:
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Not Specified
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Type:
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whole mount
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Fixation:
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4% Paraformaldehyde
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Note:
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Also stained for En1 (assay MGI:3039791).
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Specimen
3I:
embryonic day 12.5
(more )
Specimen
3I:
(close )
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Genetic Background:
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Not Specified
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Age:
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embryonic day 12.5
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Age Note:
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Age of embryo at noon of plug day not specified in reference.
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Sex:
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Not Specified
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Type:
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whole mount
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Fixation:
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4% Paraformaldehyde
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Specimen
3K:
embryonic day 12.5
(more )
Specimen
3K:
(close )
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Genetic Background:
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Not Specified
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Age:
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embryonic day 12.5
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Age Note:
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Age of embryo at noon of plug day not specified in reference.
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Sex:
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Not Specified
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Type:
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whole mount
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Fixation:
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4% Paraformaldehyde
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| Structure |
Level |
Pattern |
Image |
Note |
| TS20: spinal cord lateral wall |
Present |
Regionally restricted |
3K
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Expression is in a domain below the sulcus limitans in the differentiated V0 interneurons.
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