Gene Expression Data
Assay Details
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Assay
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Reference:
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J:42033
Miura H, et al., Expression of a novel aristaless related homeobox gene 'Arx' in the vertebrate telencephalon, diencephalon and floor plate. Mech Dev. 1997 Jul;65(1-2):99-109
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Assay type:
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RNA in situ
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MGI Accession ID:
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MGI:3037504
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Gene symbol:
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Arx
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Gene name:
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aristaless related homeobox
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Probe:
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Arx cDNA2
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Probe preparation:
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Antisense labelled with S35 RNA
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Visualized with:
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Autoradiography
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Assay notes:
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The probes were treated with alkaline for size reduction to an average 150 nucleotides.
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Results
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Specimen
5A:
embryonic day 9.5
(more  )
Specimen
5A:
(close  )
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Genetic Background:
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Not Specified
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Age:
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embryonic day 9.5
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Age Note:
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Age of embryo at noon of plug day not specified in reference. Theiler stage of this specimen assigned by curators from EMAGE.
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Sex:
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Not Specified
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Type:
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section
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Fixation:
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4% Paraformaldehyde
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Embedding:
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Paraffin
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Specimen
5B:
embryonic day 10.0
(more )
Specimen
5B:
(close )
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Genetic Background:
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Not Specified
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Age:
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embryonic day 10.0
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Age Note:
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Age of embryo at noon of plug day not specified in reference. Theiler stage of this specimen assigned by curators from EMAGE.
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Sex:
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Not Specified
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Type:
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section
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Fixation:
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4% Paraformaldehyde
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Embedding:
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Paraffin
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| Structure |
Level |
Pattern |
Image |
Note |
| TS17: telencephalon |
Present |
Regionally restricted |
5B
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Expression is in the dorsal telencephalon and strong signals in the presumptive ganglionic eminence.
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| TS17: diencephalon |
Very strong |
Regionally restricted |
5B
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Expression is in the ventral thalamus.
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| TS17: hindbrain |
Present |
Regionally restricted |
5B
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Absent at the isthmus. (Expression is present in the floor plate as shown in figure 5D.)
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| TS17: midbrain |
Present |
Regionally restricted |
5B
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Absent at the isthmus. (Expression is present in the floor plate as shown in figure 5D.)
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Specimen
5C:
embryonic day 11.0
(more )
Specimen
5C:
(close )
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Genetic Background:
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Not Specified
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Age:
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embryonic day 11.0
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Age Note:
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Age of embryo at noon of plug day not specified in reference.
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Sex:
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Not Specified
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Type:
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section
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Fixation:
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4% Paraformaldehyde
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Embedding:
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Paraffin
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| Structure |
Level |
Pattern |
Image |
Note |
| TS18: telencephalon |
Strong |
Regionally restricted |
5C
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Expression is in the dorsal telencephalon and in the medial ganglionic eminence.
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| TS18: forebrain |
Present |
Regionally restricted |
5C
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Expression is in the eminentia thalami, preoptic area and postoptic area and is absent in the hippocampus.
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| TS18: nasal epithelium |
Absent |
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5C
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Specimen
5D:
embryonic day 10.0
(more )
Specimen
5D:
(close )
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Genetic Background:
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Not Specified
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Age:
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embryonic day 10.0
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Age Note:
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Age of embryo at noon of plug day not specified in reference.
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Sex:
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Not Specified
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Type:
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section
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Fixation:
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4% Paraformaldehyde
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Embedding:
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Paraffin
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Specimen
5E:
embryonic day 10.0
(more )
Specimen
5E:
(close )
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Genetic Background:
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Not Specified
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Age:
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embryonic day 10.0
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Age Note:
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Age of embryo at noon of plug day not specified in reference.
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Sex:
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Not Specified
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Type:
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section
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Fixation:
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4% Paraformaldehyde
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Embedding:
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Paraffin
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Specimen
6A:
embryonic day 11.0
(more )
Specimen
6A:
(close )
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Genetic Background:
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Not Specified
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Age:
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embryonic day 11.0
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Age Note:
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Age of embryo at noon of plug day not specified in reference.
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Sex:
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Not Specified
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Type:
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section
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Fixation:
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4% Paraformaldehyde
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Embedding:
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Paraffin
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| Structure |
Level |
Pattern |
Image |
Note |
| TS18: telencephalon |
Present |
Regionally restricted |
6A
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Expression is in the ventriclular zone of the dorsal telencephalon, intense in the intermediate and mantle zone, and absent in the cingulate cortex or septal area.
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Specimen
6C:
embryonic day 11.0
(more )
Specimen
6C:
(close )
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Genetic Background:
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Not Specified
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Age:
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embryonic day 11.0
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Age Note:
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Age of embryo at noon of plug day not specified in reference.
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Sex:
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Not Specified
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Type:
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section
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Fixation:
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4% Paraformaldehyde
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Embedding:
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Paraffin
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| Structure |
Level |
Pattern |
Image |
Note |
| TS18: telencephalon |
Present |
Regionally restricted |
6C
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Expression is in the ventricular zone of the dorsal telencepahlon. Strong expression is in the intermediate and mantle zones-, and weak in the vernticular zone of the medial and presumptive lateral ganglionic eminences.
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| TS18: diencephalon lamina terminalis |
Present |
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6C
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Specimen
6E:
embryonic day 11.0
(more )
Specimen
6E:
(close )
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Genetic Background:
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Not Specified
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Age:
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embryonic day 11.0
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Age Note:
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Age of embryo at noon of plug day not specified in reference.
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Sex:
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Not Specified
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Type:
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section
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Fixation:
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4% Paraformaldehyde
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Embedding:
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Paraffin
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| Structure |
Level |
Pattern |
Image |
Note |
| TS18: diencephalon |
Present |
Regionally restricted |
6E
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Expression are weak in the ventricular zone, but intense in the intermediate and mantle zones of the ventral thalamus.
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Specimen
6G:
embryonic day 12.0
(more )
Specimen
6G:
(close )
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Genetic Background:
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Not Specified
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Age:
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embryonic day 12.0
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Age Note:
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Age of embryo at noon of plug day not specified in reference.
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Sex:
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Not Specified
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Type:
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section
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Fixation:
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4% Paraformaldehyde
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Embedding:
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Paraffin
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| Structure |
Level |
Pattern |
Image |
Note |
| TS20: telencephalon |
Weak |
Regionally restricted |
6G
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Expression is in the ventricular zone of the dorsal telencephalon.
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Specimen
6I:
embryonic day 12.0
(more )
Specimen
6I:
(close )
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Genetic Background:
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Not Specified
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Age:
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embryonic day 12.0
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Age Note:
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Age of embryo at noon of plug day not specified in reference.
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Sex:
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Not Specified
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Type:
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section
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Fixation:
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4% Paraformaldehyde
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Embedding:
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Paraffin
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Specimen
6K:
embryonic day 11.0
(more )
Specimen
6K:
(close )
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Genetic Background:
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Not Specified
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Age:
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embryonic day 11.0
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Age Note:
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Age of embryo at noon of plug day not specified in reference.
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Sex:
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Not Specified
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Type:
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section
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Fixation:
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4% Paraformaldehyde
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Embedding:
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Paraffin
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Specimen
Not Shown:
embryonic day 9.5
(more )
Specimen
Not Shown:
(close )
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Genetic Background:
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Not Specified
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Age:
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embryonic day 9.5
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Age Note:
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Age of embryo at noon of plug day not specified in reference.
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Sex:
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Not Specified
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Type:
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section
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Fixation:
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4% Paraformaldehyde
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Embedding:
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Paraffin
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Specimen
Not Shown:
embryonic day 10.0
(more )
Specimen
Not Shown:
(close )
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Genetic Background:
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Not Specified
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Age:
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embryonic day 10.0
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Age Note:
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Age of embryo at noon of plug day not specified in reference.
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Sex:
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Not Specified
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Type:
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section
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Fixation:
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4% Paraformaldehyde
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Embedding:
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Paraffin
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Specimen
Not Shown:
embryonic day 11.0
(more )
Specimen
Not Shown:
(close )
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Genetic Background:
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Not Specified
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Age:
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embryonic day 11.0
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Age Note:
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Age of embryo at noon of plug day not specified in reference.
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Sex:
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Not Specified
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Type:
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section
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Fixation:
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4% Paraformaldehyde
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Embedding:
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Paraffin
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Analysis Tools