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Gene Expression Data
Assay Details
Assay
Reference: J:85124 Sousa-Nunes R, et al., Characterizing embryonic gene expression patterns in the mouse using nonredundant sequence-based selection. Genome Res. 2003 Dec;13(12):2609-20
Assay type: RNA in situ
MGI Accession ID: MGI:2683211
Gene symbol: Arhgef16
Gene name: Rho guanine nucleotide exchange factor 16
Probe: w8609b57
Probe preparation: Antisense labelled with digoxigenin RNA
Visualized with: Alkaline phosphatase
Results
Specimen E6.5: embryonic day 6.5 (more )
Structure Level Pattern Image Note
TS9: ectoplacental cone Strong Regionally restricted 1B w8609b57_6.5 Strongly expressed in a single domain comprising the most proximal region of the egg cylinder and a proximo-distal stripe within the ectoplacental come.
TS9: embryo Strong Regionally restricted 1B w8609b57_6.5 Strongly expressed in a single domain comprising the most proximal region of the egg cylinder and a proximo-distal stripe within the ectoplacental come.
Specimen E7.5: embryonic day 7.5 (more )
Structure Level Pattern Image Note
TS11: ectoplacental cone Strong Regionally restricted 1B w8609b57_7.5 right , 1B w8609b57_7.5 left Strongly expressed in a single domain comprising the most proximal region of the egg cylinder and a proximo-distal stripe within the ectoplacental come.
TS11: embryo Strong Regionally restricted 1B w8609b57_7.5 right , 1B w8609b57_7.5 left Strongly expressed in a single domain comprising the most proximal region of the egg cylinder and a proximo-distal stripe within the ectoplacental come.
TS11: extraembryonic visceral endoderm Weak Uniform 1B w8609b57_7.5 left , 1B w8609b57_7.5 right Expressed throughout visceral endoderm.
TS11: notochordal plate Strong 1B w8609b57_7.5 left , 1B w8609b57_7.5 right
TS11: notochordal process Strong 1B w8609b57_7.5 left , 1B w8609b57_7.5 right
TS11: embryo ectoderm Strong Regionally restricted 1B w8609b57_7.5 left , 1B w8609b57_7.5 right Expression detected in the headfold pocket.
Specimen E8.5: embryonic day 8.5 (more )
Structure Level Pattern Image Note
TS13: notochord Strong 1B w8609b57_8.5
TS13: future prosencephalon Strong Regionally restricted 1B w8609b57_8.5 Strong expression detected in the ventral forebrain.
TS13: foregut diverticulum Weak 1B w8609b57_8.5
Specimen E9.5: embryonic day 9.5 (more )
Structure Level Pattern Image Note
TS16: 1st branchial arch Present Regionally restricted 1B w8609b57_9.5 Epithelial expression extends from the ventral forebrain to the fourth branchial arch.
TS16: 2nd branchial arch Present Regionally restricted 1B w8609b57_9.5 Epithelial expression extends from the ventral forebrain to the fourth branchial arch.
TS16: 3rd branchial arch Present Regionally restricted 1B w8609b57_9.5 Epithelial expression extends from the ventral forebrain to the fourth branchial arch.
TS16: future forebrain Present Regionally restricted 1B w8609b57_9.5 Epithelial expression extends from the ventral forebrain to the fourth branchial arch.
TS16: otocyst Present 1B w8609b57_9.5
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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05/21/2024
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