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Gene Expression Data
Assay Details
Assay
Reference: J:70091 Ristevski S, et al., Desrt, an AT-rich interaction domain family transcription factor gene, is an early marker for nephrogenic mesoderm and is expressed dynamically during mouse limb development. Mech Dev. 2001 Jun;104(1-2):139-42
Assay type: RNA in situ
MGI Accession ID: MGI:2449547
Gene symbol: Arid5b
Gene name: AT-rich interaction domain 5B
Probe: Desrt cDNA1
Probe preparation: Antisense labelled with digoxigenin RNA
Results
Specimen 1A: embryonic day 7.0 (more )
Structure Level Pattern Image Note
TS10: extraembryonic component Present 1A
TS10: embryo Absent 1A
TS10: ectoplacental cone Present Regionally restricted 1A Expression was detected in the trophoblast giant cells.

Specimen 1B: embryonic day 8.0 (more )
Structure Level Pattern Image Note
TS12: foregut diverticulum Present 1B
TS12: intermediate mesenchyme Present 1B
TS12: future hindbrain neural crest Present Regionally restricted 1B Expression was detected in the premigratory neural crest.
TS12: future midbrain neural crest Present Regionally restricted 1B Expression was detected in the premigratory neural crest.

Specimen 1C: embryonic day 8.5 (more )
Structure Level Pattern Image Note
TS13: branchial arch Present 1C
TS13: foregut diverticulum Present 1C
TS13: hindgut diverticulum Present 1C
TS13: oral region Present Regionally restricted 1C Expression was detected in the oro-nasal-pharyngeal tissue.
TS13: extraembryonic component Present Regionally restricted 1C Expression was detected in the allantois.
TS13: nephrogenic cord Present Regionally restricted 1C Expression was present in the nephrogenic cord.
TS13: future hindbrain Present Regionally restricted 1C Expression was present in the premigratory neural crest.
TS13: future midbrain neural crest Present Regionally restricted 1C Expression was present in the premigratory neural crest.
TS13: head somite Present Regionally restricted 1C Expression was detected in a distinct caudal band corresponding to the anterior region of the segmenting somite.
TS13: trunk somite Present Regionally restricted 1C Expression was detected in a distinct caudal band corresponding to the anterior region of the segmenting somite.

Specimen 1D: embryonic day 9.0 (more )
Structure Level Pattern Image Note
TS14: nephrogenic cord Present Regionally restricted 1D Expression was detected in the nephrogenic mesoderm.
TS14: forelimb bud ectoderm Present Regionally restricted 1D
TS14: forelimb bud mesenchyme Present Regionally restricted 1D Expression was detected in the proximal mesenchyme.
TS14: foregut Present Regionally restricted 1D Expression was detected in the foregut portal endoderm.
TS14: future midbrain neural crest Present Regionally restricted 1D Expression was detected in the premigratory neural crest.
TS14: future hindbrain Present Regionally restricted 1D Expression was detected in the hindbrain premigratory neural crest.
TS14: head somite Present Regionally restricted 1D Expression was detected in a distinct caudal band corresponding to the anterior region of the segmenting somite.
TS14: trunk somite Present Regionally restricted 1D Expression was detected in a distinct caudal band corresponding to the anterior region of the segmenting somite.

Specimen 1E: embryonic day 9.5 (more )
Structure Level Pattern Image Note
TS16: liver Present 1E
TS16: mesonephric tubule Present 1E
TS16: otocyst epithelium Present 1E
TS16: limb Present Regionally restricted 1E Expression was detected in the rostral and caudal mesenchyme of the limb bud.
TS16: 1st branchial arch Present Regionally restricted 1E Expression was detected in the ectoderm and mesenchyme.
TS16: 2nd branchial arch Present Regionally restricted 1E Expression was detected in the ectoderm and mesenchyme.
TS16: arterial system Present Regionally restricted 1E Expression was detected in the truncus arteriosus.
TS16: heart Absent 1E
TS16: esophagus Strong 1E
TS16: lung Strong 1E
TS16: thyroid primordium Strong 1E
TS16: trachea Strong 1E
TS16: oral region cavity Strong Regionally restricted 1E Expression was strong in the lining.
TS16: foregut gland Strong Regionally restricted 1E Expression was detected in the thymus.
TS16: nasal pit Present Regionally restricted 1E Expression was detected in the olfactory placode.
TS16: trunk dermomyotome Present 1E

Specimen 1F: embryonic day 9.5 (more )
Structure Level Pattern Image Note
TS15: mesonephric tubule Present 1F
TS15: limb Present Regionally restricted 1F Expression was detected in the rostral and caudal mesenchyme of the limb bud.
TS15: hindgut Present Regionally restricted 1F Expression was detected in the endoderm.

Specimen 2A: embryonic day 9.0 (more )
Structure Level Pattern Image Note
TS14: forelimb bud ectoderm Present Regionally restricted 2A Expression was detected in the surface ectoderm.
TS14: forelimb bud mesenchyme Present Regionally restricted 2A Expression was detected in the proximal mesenchyme.
TS14: arterial system Present Regionally restricted 2A Expression was detected in the truncus arteriosus.
TS14: heart Absent 2A

Specimen 2B: embryonic day 9.5 (more )
Structure Level Pattern Image Note
TS15: forelimb bud mesenchyme Present Regionally restricted 2B Expression was detected in the rostral and caudal mesenchyme.

Specimen 2C: embryonic day 10.5 (more )
Structure Level Pattern Image Note
TS17: forelimb bud mesenchyme Present Regionally restricted 2C Expression was detected in the rostral and caudal mesenchyme of the prospective arm region but absent from the handplate.
TS17: forelimb bud ectoderm Absent 2C

Specimen 2D: embryonic day 11.5 (more )
Structure Level Pattern Image Note
TS19: handplate mesenchyme Present Regionally restricted 2D Expression was detected broadly in the distal mesenchyme.

Specimen 2E: embryonic day 12.5 (more )
Structure Level Pattern Image Note
TS20: foot mesenchyme Present Regionally restricted 2E Expression was detected broadly in the distal mesenchyme.

Specimen 2F: embryonic day 12.5 (more )
Structure Level Pattern Image Note
TS20: hand mesenchyme Present Regionally restricted 2F Expression was detected broadly in the distal mesenchyme.

Specimen 2G: embryonic day 13.5 (more )
Structure Level Pattern Image Note
TS21: hindlimb interdigital region Present 2G

Specimen 3A: embryonic day 10.5 (more )
Structure Level Pattern Image Note
TS17: endolymphatic appendage Present 3A
TS17: endolymphatic appendage epithelium Present 3A
TS17: liver Present 3A
TS17: otocyst epithelium Present 3A
TS17: trunk dermomyotome Present 3A
TS17: 1st branchial arch Present Regionally restricted 3A Expression was detected in the ectoderm and mesenchyme.
TS17: 2nd branchial arch Present Regionally restricted 3A Expression was detected in the ectoderm and mesenchyme.
TS17: esophagus Strong 3A
TS17: lung Strong 3A
TS17: thyroid primordium Strong 3A
TS17: trachea Strong 3A
TS17: oral region cavity Strong Regionally restricted 3A Expression was detected in the lining.
TS17: foregut gland Strong Regionally restricted 3A Expression was detected in the thymus.

Specimen 3B: embryonic day 11.5 (more )
Structure Level Pattern Image Note
TS19: endolymphatic appendage Present 3B
TS19: trunk dermomyotome Present 3B
TS19: head mesenchyme Present Regionally restricted 3B Expression was present in the mesenchyme underlying the ectoderm covering the forebrain and face.
TS19: embryo ectoderm Present Regionally restricted 3B Expression was detected in the ectoderm covering the forebrain and face.

Specimen 3C: embryonic day 12.5 (more )
Structure Level Pattern Image Note
TS20: endolymphatic appendage Present 3C
TS20: external auditory meatus Present 3C
TS20: tail dermomyotome Present 3C
TS20: embryo mesenchyme Present Regionally restricted 3C Expression was detected in the mesenchyme underlying the ectoderm covering the forebrain and face.
TS20: head Present Regionally restricted 3C Expression was detected in the ectoderm covering the forebrain and face.
TS20: nasal cavity Present Regionally restricted 3C Expression was detected in the olfactory placodes and nasal pits.

Specimen 3D: embryonic day 13.5 (more )
Structure Level Pattern Image Note
TS21: lower eyelid Present 3D
TS21: upper eyelid Present 3D
TS21: nasal cavity Present Regionally restricted 3D Expression was detected in the nasal pits.
TS21: trunk Present Regionally restricted 3D Expression was detected in the hair follicles.
TS21: vibrissa Present Regionally restricted 3D Expression was detected in the hair follicles.
TS21: reproductive system Present Regionally restricted 3D Expression was detected in the surface ectoderm and mesenchyme of the genital tubercle.

Specimen Not Shown: embryonic day 11.5 (more )
Structure Level Pattern Image Note
TS19: liver Present

Specimen Not Shown: embryonic day 10.5 (more )
Structure Level Pattern Image Note
TS17: diencephalon Present Regionally restricted Expression was detected in the hypothalamus.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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last database update
05/14/2024
MGI 6.23
The Jackson Laboratory