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Gene Expression Data
Assay Details
Assay
Reference: J:25250 Grindley JC, et al., The role of Pax-6 in eye and nasal development. Development. 1995 May;121(5):1433-42
Assay type: RNA in situ
MGI Accession ID: MGI:2385724
Gene symbol: Pax6
Gene name: paired box 6
Probe: Pax6 cDNA2
Probe preparation: Antisense labelled with S35 RNA
Visualized with: Autoradiography
Results
Specimen 3A: embryonic day 8.0 (more )
Structure Level Pattern Image Note
TS12: neural ectoderm Present Regionally restricted 3A Transcripts detected over extensive region of head neural ectoderm.
TS12: optic sulcus neural ectoderm Present 3A Authors report expression in optic pit.
TS12: future hindbrain floor plate Absent 3A
TS12: future midbrain floor plate Absent 3A
TS12: future prosencephalon floor plate Absent 3A
TS12: surface ectoderm Present Regionally restricted 3A Expression in broad region of head surface ectoderm covering prosencephalon; not hindbrain region or presumptive first branchial arch.

Specimen 3B: embryonic day 8.5 (more )
Structure Level Pattern Image Note
TS13: future prosencephalon Present Regionally restricted 3B Segmented expression in presumptive diencephalon, mainly dorsal, reaching neural folds segmented. Weaker in presumptive telencephalon; neural ectoderm expression weak or undetectable at neural folds.
TS13: future prosencephalon neural fold Present Regionally restricted 3B Segmented expression in presumptive diencephalon, mainly dorsal, reaching neural folds segmented. Weaker in presumptive telencephalon; neural ectoderm expression weak or undetectable at neural folds.
TS13: optic pit neural ectoderm Strong Regionally restricted 3B Authors report that expression is strong in optic vesicle,
TS13: surface ectoderm Present Regionally restricted 3B Expression in surface ectoderm is still broad, and extends rostrally to neural folds.

Specimen 3C: embryonic day 9.25 (more )
Structure Level Pattern Image Note
TS15: lens placode Present Regionally restricted 3C Expression in lens placode forms part of a larger domain that extends in dorsal-caudal direction.

Specimen 3D: embryonic day 9.5 (more )
Structure Level Pattern Image Note
TS16: lens pit Present Regionally restricted 3D Expression in surface ectoderm becomes restricted to developing lens placode, nasal placode and immediately adjacent tissue.
TS16: nasal pit Present Regionally restricted 3D Expression in surface ectoderm becomes restricted to developing lens placode, nasal placode and immediately adjacent tissue.
TS16: surface ectoderm Present Regionally restricted 3D Expression in surface ectoderm becomes restricted to developing lens placode, nasal placode and immediately adjacent tissue.

Specimen not shown: embryonic day 9.75 (more )
Structure Level Pattern Image Note
TS16: lens pit Present Regionally restricted Authors report expression in lens and nasal placodes, clearly separated by a region of non-expressing ectoderm.
TS16: nasal pit Present Regionally restricted Authors report expression in lens and nasal placodes, clearly separated by a region of non-expressing ectoderm.
TS16: surface ectoderm Present Regionally restricted Authors report expression in lens and nasal placodes, clearly separated by a region of non-expressing ectoderm.

Specimen 3E: embryonic day 10.5 (more )
Structure Level Pattern Image Note
TS17: eye surface ectoderm Present Regionally restricted 3E As lens pit formation proceeds, expression domain is further restricted until it lies exclusively within developing eye region.
TS17: lens pit Present Regionally restricted 3E As lens pit formation proceeds, expression domain is further restricted until it lies exclusively within developing eye region.

Specimen 3F: embryonic day 15.5 (more )
Structure Level Pattern Image Note
TS23: cornea Present Regionally restricted 3F Expression continues in parts of eye derived from surface ectoderm, including lens pit, lens vesicle and lens, as well as developing cornea.
TS23: eye Present Regionally restricted 3F Expression continues in parts of eye derived from surface ectoderm, including lens pit, lens vesicle and lens, as well as developing cornea.
TS23: lens Present Regionally restricted 3F Expression continues in parts of eye derived from surface ectoderm, including lens pit, lens vesicle and lens, as well as developing cornea.

Specimen 4C: embryonic day 15.5; Pax6Sey/Pax6Sey (more )
Structure Level Pattern Image Note
TS23: eye Present Regionally restricted 4C Authors report expression predominantly in 2 neuroectodermal layers of optic cup-like structure.
TS23: optic stalk Weak 4C Little expression in optic stalk.

Specimen 4D: embryonic day 12.5 (more )
Structure Level Pattern Image Note
TS20: eye Present Regionally restricted 4D
TS20: pigmented retinal epithelium Absent 4D Authors report considerable region of pigmented retinal epithelium that does not express Pax-6.

Specimen 4E: embryonic day 12.5; Pax6Sey/Pax6Sey (more )
Structure Level Pattern Image Note
TS20: eye Present Regionally restricted 4E Authors describe distally restricted expression domains.

Specimen not shown: embryonic day 8.0; Pax6Sey/Pax6Sey (more )
Structure Level Pattern Image Note
TS12: eye Present Regionally restricted Authors report no differences from normal pattern of expression in mutant embryo eye.

Specimen 5A: embryonic day 8.5 (more )
Structure Level Pattern Image Note
TS13: eye Present 5A

Specimen 5B: embryonic day 8.5; Pax6Sey/Pax6Sey (more )
Structure Level Pattern Image Note
TS13: eye Present Regionally restricted 5B Authors report that homozygous mutant embryos have the same expression pattern in optic vesicles as their +/+ and +/- littermates.
TS13: optic pit Present Regionally restricted 5B Authors report that homozygous mutant embryos have the same expression pattern in optic vesicles as their +/+ and +/- littermates.

Specimen 5C control: embryonic day 9.75 (more )
Structure Level Pattern Image Note
TS16: surface ectoderm Present Regionally restricted 5C (right) Expression in surface ectoderm adjacent to optic vesicle; strongest in most distal structures; confined to around lens and nasal placodes.

Specimen 5C Sey/Sey: embryonic day 9.75; Pax6Sey/Pax6Sey (more )
Structure Level Pattern Image Note
TS16: surface ectoderm Absent 5C (left) No expression in surface ectoderm anywhere in the head, including the eye region; no expression in surface ectoderm adjacent to optic vesicle.

Specimen 6A: embryonic day 9.5 (more )
Structure Level Pattern Image Note
TS15: lens placode Present 6A Expression in nasal region. Authors report expression in nasal placode at a lower level than in lens placode.
TS15: nose Present 6A Expression in nasal region. Authors report expression in nasal placode at a lower level than in lens placode.
TS15: olfactory placode Present 6A Expression in nasal region. Authors report expression in nasal placode at a lower level than in lens placode.

Specimen 6B: embryonic day 10.5 (more )
Structure Level Pattern Image Note
TS17: nasal pit Present Regionally restricted 6B Expression in nasal region; continues in placodal epithelium during formation of nasal pits.
TS17: nose Present Regionally restricted 6B Expression in nasal region; continues in placodal epithelium during formation of nasal pits.

Specimen not shown: embryonic day 10.5 (more )
Structure Level Pattern Image Note
TS17: olfactory epithelium Present Expression detectable in developing olfactory epithelium.

Specimen 6C: embryonic day 9.75 (more )
Structure Level Pattern Image Note
TS16: nose Present Regionally restricted 6C Authors report expression detectable in nasal placodes.

Specimen 6D: embryonic day 9.75; Pax6Sey/Pax6Sey (more )
Structure Level Pattern Image Note
TS16: nose Absent 6D Authors report absence of expression in nasal placode and nasal region.
TS16: future forebrain Present 6D Expression in forebrain neuroepithelium.


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Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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last database update
05/07/2024
MGI 6.23
The Jackson Laboratory