Gene Expression Data
Assay Details
|
Assay
|
|
Reference:
|
J:73527
Ferguson CA, et al., The role of effectors of the activin signalling pathway, activin receptors IIA and IIB, and Smad2, in patterning of tooth development. Development. 2001 Nov;128(22):4605-13
|
|
Assay type:
|
RNA in situ
|
|
MGI Accession ID:
|
MGI:2157140
|
|
Gene symbol:
|
Irx1
|
|
Gene name:
|
Iroquois homeobox 1
|
|
Probe:
|
Irx1 cDNA6
|
|
Probe preparation:
|
Antisense labelled with digoxigenin RNA
|
|
Visualized with:
|
Alkaline phosphatase
|
|
|
Results
|
Specimen
1. A.:
embryonic day 9.5
(more  )
Specimen
1. A.:
(close  )
|
Genetic Background:
|
CD-1
|
|
Age:
|
embryonic day 9.5
|
|
Sex:
|
Not Specified
|
|
Type:
|
whole mount
|
|
Fixation:
|
4% Paraformaldehyde
|
| Structure |
Level |
Pattern |
Image |
Note |
| TS15: 1st branchial groove ectoderm |
Present |
|
1A
|
Expression detected in the epithelium of the branchial cleft between the first and second branchial arches.
|
| TS15: 1st branchial arch |
Present |
Regionally restricted |
1A
|
Expression was excluded from the oral epithelium of the first arch.
|
Specimen
1. B.:
embryonic day 9.5
(more )
Note: Specimen is a section from specimen 1. A. whole-mount hybidization.
Specimen
1. B.:
(close )
|
Genetic Background:
|
CD-1
|
|
Age:
|
embryonic day 9.5
|
|
Sex:
|
Not Specified
|
|
Type:
|
section from whole mount
|
|
Fixation:
|
4% Paraformaldehyde
|
|
Embedding:
|
Paraffin
|
|
Note:
|
Specimen is a section from specimen 1. A. whole-mount hybidization.
|
| Structure |
Level |
Pattern |
Image |
Note |
| TS15: 1st branchial groove ectoderm |
Present |
|
1B
|
Expression detected in the epithelium of the branchial cleft between the first and second branchial arches.
|
| TS15: 1st branchial arch |
Present |
Regionally restricted |
1B
|
Expression was excluded from the oral epithelium of the first arch.
|
Specimen
1. C.:
embryonic day 9.5
(more )
Note: Specimen is a section from specimen 1. A. whole-mount hybidization.
Specimen
1. C.:
(close )
|
Genetic Background:
|
CD-1
|
|
Age:
|
embryonic day 9.5
|
|
Sex:
|
Not Specified
|
|
Type:
|
section from whole mount
|
|
Fixation:
|
4% Paraformaldehyde
|
|
Embedding:
|
Paraffin
|
|
Note:
|
Specimen is a section from specimen 1. A. whole-mount hybidization.
|
| Structure |
Level |
Pattern |
Image |
Note |
| TS15: 1st branchial groove ectoderm |
Present |
|
1C
|
Expression detected in the epithelium of the branchial cleft between the first and second branchial arches and the more posterior arches.
|
| TS15: branchial groove |
Present |
Regionally restricted |
1C
|
Expression detected in the epithelium of the branchial cleft between the first and second branchial arches and the more posterior arches.
|
Specimen
1. D.:
embryonic day 10.5
(more )
Specimen
1. D.:
(close )
|
Genetic Background:
|
CD-1
|
|
Age:
|
embryonic day 10.5
|
|
Sex:
|
Not Specified
|
|
Type:
|
whole mount
|
|
Fixation:
|
4% Paraformaldehyde
|
| Structure |
Level |
Pattern |
Image |
Note |
| TS17: 1st branchial arch |
Strong |
Regionally restricted |
1D
|
Expression is detected in the oral epithelium of the first branchial arch.
|
| TS17: oral epithelium |
Strong |
Regionally restricted |
1D
|
Expression is detected in the oral epithelium of the first branchial arch.
|
Specimen
1. E.:
embryonic day 10.5
(more )
Note: Specimen is a section from specimen 1. D. whole-mount hybidization.
Specimen
1. E.:
(close )
|
Genetic Background:
|
CD-1
|
|
Age:
|
embryonic day 10.5
|
|
Sex:
|
Not Specified
|
|
Type:
|
section from whole mount
|
|
Fixation:
|
4% Paraformaldehyde
|
|
Embedding:
|
Paraffin
|
|
Note:
|
Specimen is a section from specimen 1. D. whole-mount hybidization.
|
| Structure |
Level |
Pattern |
Image |
Note |
| TS17: 1st branchial arch |
Strong |
Regionally restricted |
1E
|
Expression is detected in the oral epithelium of the first branchial arch.
|
| TS17: oral epithelium |
Strong |
Regionally restricted |
1E
|
Expression is detected in the oral epithelium of the first branchial arch.
|
|
Analysis Tools